prot_H-paniculata_contig1881.4680.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1881.4680.1
Unique Nameprot_H-paniculata_contig1881.4680.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1438
Homology
BLAST of mRNA_H-paniculata_contig1881.4680.1 vs. uniprot
Match: A0A6H5JUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY5_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 2.160e-18
Identity = 117/416 (28.12%), Postives = 168/416 (40.38%), Query Frame = 0
Query:  497 GTDYDMDEDDRDFLKVLNHEYAETENGRLE--GMELDEASWVMSAEIFEDLIEHLERQEDNARDHTNLMETSERLVIELETSKAKALQVCDEADDMLDPNSQKTSPGKHSNQSAKSPGR--------------RWGDSLNMKVKELEEIARTKKGLLLSEGQSGGXXXXXXXXXXXXXXXXXAVIARKSELSAIRRD-GPVYLTRDVALHMLRKRLVASQXXXXXXXGIPNLEKPES---ETANTRLKVTNSRSSMKAGGQKSGGEPSLTPKERASRSKGKGRAKDERRRQAVGNVSNKVTDGGLEKLSDSILVKLYSYWAAKRVAYNGPMLRCLHVHVGAKLWQRVEDPERESAHRRQTFSSQMQDVEHSMDPEADDEALDLLEHCRTELEHLRRIADLAKRREKEKSNAFQISS 892
            G+DYDMD+DD  FL+ LN   +     ++   G    E  W +SA +FE +IE LERQE  ARD   L+E S RL  E   +  +  Q   E D +L+  +  T     S +  +S                   G + +  + +         GL    G +                   +        + I R  GPV LT+  AL +LR  + A +       G  N+    +   ETA+ R K                              KGKG+    R  ++ G             +SD  L+ ++ YWA KR AY GPMLRC H  +  KLW+R+EDP RE+           +D E   DP A  EA D L+  R +L+  R + D  KRREK K +A + ++
Sbjct:  460 GSDYDMDDDDFAFLQQLNGGKSTGGGSKVATGGDCTGEKGWAVSANLFEGMIERLERQESRARDTMVLVEASLRLKEEHADASKRVDQFIKEGDAVLNFAAGVTEDDDFSARRGRSGSNGVDGSGGGGAARDVSGGSNSDGHMSDAHXXXXXXXGLRHGCGSTSSTVGRRRKKHTGYVQEEDSDSDDGERHARIMRSRGPVTLTQTFALPLLRSYVTAFKSASDSRRGATNVGNGLAGARETASRRSKGW----------------------------KGKGKQPASRSGRSSGXXXXXXXXXXXXXVSDDQLLDVFRYWAKKREAYGGPMLRCFHPFI-MKLWRRMEDPVREA-----------EDQEEGKDPHASPEAFDTLKSFRQDLDKARLVVDCVKRREKLKRSAIRFAN 835          
BLAST of mRNA_H-paniculata_contig1881.4680.1 vs. uniprot
Match: D7FMY3_ECTSI (Bromodomain and PHD finger containing, 3, isoform CRA_c n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMY3_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 1.190e-11
Identity = 52/138 (37.68%), Postives = 72/138 (52.17%), Query Frame = 0
Query:  755 KGKGRAKDERRRQAVGNVSNKVTDGGLEKLSDSILVKLYSYWAAKRVAYNGPMLRCLHVHVGAKLWQRVEDPERESAHRRQTFSSQMQDVEHSMDPEADDEALDLLEHCRTELEHLRRIADLAKRREKEKSNAFQISS 892
            KGKG+    R  ++ G             +SD  L+ ++ YWA KR AY GPMLRC H  +  KLW+R+EDP RE+           +D E   DP A  EA D L+  R +L+  R + D  KRREK K +A + ++
Sbjct:  252 KGKGKQPASRSGRSSGXXXXXXXXXXXXAVSDDQLLDVFRYWAKKREAYGGPMLRCFHPFI-MKLWRRMEDPVREA-----------EDQEEGKDPHASPEAFDTLKSFRQDLDKARLVVDCVKRREKLKRSAIRFAN 377          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1881.4680.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JUY5_9PHAE2.160e-1828.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMY3_ECTSI1.190e-1137.68Bromodomain and PHD finger containing, 3, isoform ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 539..569
NoneNo IPR availableCOILSCoilCoilcoord: 860..880

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1881contigH-paniculata_contig1881:6253..13813 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1881.4680.1mRNA_H-paniculata_contig1881.4680.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1881 4783..13924 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1881.4680.1 ID=prot_H-paniculata_contig1881.4680.1|Name=mRNA_H-paniculata_contig1881.4680.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1438bp
MRDSLVAGTCSRRGDRSPPKFRASSSLLSTSRNMPPKVGGGSKQSEESSE
ARGRRKVVARQLATLVVPTTGRRSTRAGPPLPPVPASTKRARTPSMIKRT
EGTSTNRQSSKPVQRTVDPSHLTSSQSPLKKSNKERSGLGTSDSSSRPLL
SLKAGSSRTSVPVPKPVAGNRTEVLAPGRVTVTPCRSPRTTTSVIGTATT
GSMGGTGGSTARAAAAAAAVSRLPHCDEPFRPSTRQGRQPELKDYERILP
RWMYLENGASASWQNREEFDLVWDALPAMAAPSASTSAIRSSSAGNCRGG
GRGTVDRGVSCGGSSAVGSRRPVVGSTGVRARGRISPSPARRGGAAGPIP
TPAPATAPSAPAGETENGATSFINTPGVTVHNRFPKLGPMAKSDRVIPAS
RQEPGFVDPVGVARGARRKRSAMVGSAAVRPNGAPVAPPLPPRGGASSLS
SGEEVSAATVPMGIPGGVRATGNGVAPTTQANRGEVPYSWPTTIPKGTDY
DMDEDDRDFLKVLNHEYAETENGRLEGMELDEASWVMSAEIFEDLIEHLE
RQEDNARDHTNLMETSERLVIELETSKAKALQVCDEADDMLDPNSQKTSP
GKHSNQSAKSPGRRWGDSLNMKVKELEEIARTKKGLLLSEGQSGGACSGG
GDGSTSDDDDDDAVIARKSELSAIRRDGPVYLTRDVALHMLRKRLVASQQ
AAGGGGGIPNLEKPESETANTRLKVTNSRSSMKAGGQKSGGEPSLTPKER
ASRSKGKGRAKDERRRQAVGNVSNKVTDGGLEKLSDSILVKLYSYWAAKR
VAYNGPMLRCLHVHVGAKLWQRVEDPERESAHRRQTFSSQMQDVEHSMDP
EADDEALDLLEHCRTELEHLRRIADLAKRREKEKSNAFQISSKLVAMAPK
MEKLLEQHMEKLRRQAQLAQRPKATRRAPRPQSSRNSPPPTRGRLANPRA
SGMTGGVAGGTAVVGARATGTGGDAAGVRTNSGGSAISGGGRAISARAAA
QAARLAVKNIASKEVESQNDTSRSSNRVDCGAEGARASGGSNSESRGNCE
NPNYDSRNRDDARRKINKRPSQTEMSSRGGKRNRRAGSGSIPSVAAAAAS
SATLPDDYFWKRLEGLQRGRPSNSVMAEEHGARGGGYDAGSRPGNESVTA
TAKQDGAFGANSKSTVVTGEFLTAQGYAAHPKSKPPRVGLFSYNGLASDG
VRHAALLGASITYDGTFTGGVDPAFARDAITCESGESTRLAASSCEERIS
EREQRRLARQCNAPGQPEPSTSHRRHRHHPVAAAESAPAPVQRAAGRGST
SSTRSRGSADANVIRDETTTVKQTQQQSQRSNPATAAATDITSSATSRRS
RRAAVDGANAPADDNHVGATARILEKNRSGTSVSQHQSIVVNDDDRSTTQ
RMLRANARGSREHSRGGSSCRGRVGGGRRLVVEAMVQ*
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