prot_H-paniculata_contig188.4672.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig188.4672.1
Unique Nameprot_H-paniculata_contig188.4672.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length86
Homology
BLAST of mRNA_H-paniculata_contig188.4672.1 vs. uniprot
Match: A0A6H5K8D8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D8_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 3.000e-40
Identity = 66/86 (76.74%), Postives = 74/86 (86.05%), Query Frame = 0
Query:    1 GQALEVVSSTCLVMMSTLRLDRAGRNGPVPDKYIYDVMCADECVLSDSLREEAMAFTGCTCLQLSSQPADLTYHLLGDWCRKNSGR 86
            GQALEVVSSTC VMM TLRLDRAGRNGPV DKYIYDVMCA+EC LSDS+REEAM  + CTCL+LS+QP++  YH  GDWC +NSGR
Sbjct:  113 GQALEVVSSTCRVMMDTLRLDRAGRNGPVQDKYIYDVMCANECTLSDSIREEAMELSSCTCLELSTQPSNPIYHTEGDWCVENSGR 198          
BLAST of mRNA_H-paniculata_contig188.4672.1 vs. uniprot
Match: A0A835Z9M4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9M4_9STRA)

HSP 1 Score: 104 bits (260), Expect = 4.300e-26
Identity = 48/86 (55.81%), Postives = 61/86 (70.93%), Query Frame = 0
Query:    1 GQALEVVSSTCLVMMSTLRLDRAGRNGPVPDKYIYDVMCADECVLSDSLREEAMAFTGCTCLQLSSQPADLTYHLLGDWCRKNSGR 86
            GQA+E  ++ C + +  LRLDRAGR+GPV + +I+DVMC+DECV SD+LR  AMA  GC CL LS+Q    +Y   GDWC  NSGR
Sbjct:   70 GQAMEKAATKCKLKLEQLRLDRAGRHGPVEEWWIFDVMCSDECVQSDALRRAAMAACGCDCLALSTQAGAPSYRAAGDWCAHNSGR 155          
BLAST of mRNA_H-paniculata_contig188.4672.1 vs. uniprot
Match: A0A482SVE4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVE4_9ARCH)

HSP 1 Score: 80.9 bits (198), Expect = 8.300e-17
Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    3 ALEVVSSTCLVMMSTLRLDRAGRNGPVPDKYIYDVMCADECVLSDSLREEAMAFTGCTCLQLSSQPADLTYHLLGDWCRKNSGR 86
            A+ +    C  M  +L L R+GR GP+  +  Y +MC D C+ +D+L E AM  TGC+CL+LS+QP D+++   GDWC +N+ R
Sbjct:   73 AMSLALRGCQRMFESLYLYRSGRMGPINIQDSYKIMCRDYCIENDNLHEIAMNITGCSCLELSTQPGDISFTKEGDWCSQNTAR 156          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig188.4672.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K8D8_9PHAE3.000e-4076.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9M4_9STRA4.300e-2655.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A482SVE4_9ARCH8.300e-1742.86Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig188contigH-paniculata_contig188:17761..18018 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig188.4672.1mRNA_H-paniculata_contig188.4672.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig188 17761..18018 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig188.4672.1 ID=prot_H-paniculata_contig188.4672.1|Name=mRNA_H-paniculata_contig188.4672.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bp
GQALEVVSSTCLVMMSTLRLDRAGRNGPVPDKYIYDVMCADECVLSDSLR
EEAMAFTGCTCLQLSSQPADLTYHLLGDWCRKNSGR
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