prot_H-paniculata_contig18790.4670.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18790.4670.1
Unique Nameprot_H-paniculata_contig18790.4670.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length116
Homology
BLAST of mRNA_H-paniculata_contig18790.4670.1 vs. uniprot
Match: A0A2N5VDA8_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5VDA8_9BASI)

HSP 1 Score: 75.1 bits (183), Expect = 1.510e-13
Identity = 40/116 (34.48%), Postives = 64/116 (55.17%), Query Frame = 0
Query:    2 IISTMMLYKRKITEDGNVVKHKRRFVARGNRQIKNLHYREASSLAPAAATTKMKLSAATVQ--DWELRHVDFEQAYIQAPIDQEIFIGIPEEYWEFPGAVRRLDKAIYGLEQAGRC 115
            I+    ++ +K    G + ++K R VA+G  QIK  H+ +  + AP A    M+L    V   +W +   DF  AY+ +PID+E+++  P+     PG   +L KA+YG +QAGRC
Sbjct:  124 ILGAQWVFAKKFNSKGEIQRYKARHVAKGYSQIKGKHFDK--TFAPTATFISMRLILTIVACFNWPVHSFDFVAAYLNSPIDEEVWVTAPKGLDVLPGHACQLKKALYGTKQAGRC 237          
BLAST of mRNA_H-paniculata_contig18790.4670.1 vs. uniprot
Match: A0A0C4EU54_PUCT1 (Uncharacterized protein n=1 Tax=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) TaxID=630390 RepID=A0A0C4EU54_PUCT1)

HSP 1 Score: 75.5 bits (184), Expect = 1.610e-13
Identity = 38/114 (33.33%), Postives = 64/114 (56.14%), Query Frame = 0
Query:    2 IISTMMLYKRKITEDGNVVKHKRRFVARGNRQIKNLHYREASSLAPAAATTKMKLSAATVQDWELRHVDFEQAYIQAPIDQEIFIGIPEEYWEFPGAVRRLDKAIYGLEQAGRC 115
            +++   ++ +K+  DG+V ++K  FVARG  QI  L Y E  +      +  + L+ A + +W +   DF  AY+ +PID+++++  PE     PG    L KA+YG +QA RC
Sbjct:  983 VMTAKWVFTKKLKADGSVDRYKACFVARGYSQIAGLQYGETFAFTATFVSMCLLLTMAALNNWPVHSFDFVAAYLNSPIDEDLWVIAPEGLSTPPGYACHLKKALYGTKQAARC 1096          
BLAST of mRNA_H-paniculata_contig18790.4670.1 vs. uniprot
Match: A0A2S4VZZ4_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Puccinia striiformis TaxID=27350 RepID=A0A2S4VZZ4_9BASI)

HSP 1 Score: 74.7 bits (182), Expect = 2.980e-13
Identity = 41/116 (35.34%), Postives = 64/116 (55.17%), Query Frame = 0
Query:    2 IISTMMLYKRKITEDGNVVKHKRRFVARGNRQIKNLHYREASSLAPAAA--TTKMKLSAATVQDWELRHVDFEQAYIQAPIDQEIFIGIPEEYWEFPGAVRRLDKAIYGLEQAGRC 115
            ++    ++ RK T  G   K K R+VA+G  QI   H+  A + AP A   + ++ L+ A  + W +   DF  AY+ +PI++E+++  PE     PG   RL KA+YG +QA RC
Sbjct:  690 VMKARWVFARKTTSAGEFDKFKARYVAKGYTQIAGKHF--AGTFAPTATFISFRLILAIAAQKSWPVHSFDFVAAYLNSPIEEELWVEAPEGLKVLPGQACRLKKALYGTKQAARC 803          
BLAST of mRNA_H-paniculata_contig18790.4670.1 vs. uniprot
Match: A0A2N5VC64_9BASI (Gag-Pol-p199 n=2 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5VC64_9BASI)

HSP 1 Score: 74.7 bits (182), Expect = 3.020e-13
Identity = 38/108 (35.19%), Postives = 58/108 (53.70%), Query Frame = 0
Query:    8 LYKRKITEDGNVVKHKRRFVARGNRQIKNLHYREASSLAPAAATTKMKLSAATVQDWELRHVDFEQAYIQAPIDQEIFIGIPEEYWEFPGAVRRLDKAIYGLEQAGRC 115
            ++ +K   DG   ++K RFVA+G +QI  LH+ E  +      + ++ L  A    W +   DF  AY+ +PID+EI++  P+      G   RL KA+YG  QA RC
Sbjct:  935 VFAKKTNADGTPSRYKARFVAKGFKQIAGLHFAETFAPTATFVSLRLLLVTAATHQWPVHSFDFVAAYLNSPIDEEIWVKAPDGVSLPEGHAYRLKKALYGTRQAARC 1042          
BLAST of mRNA_H-paniculata_contig18790.4670.1 vs. uniprot
Match: A0A0F7ZQQ7_9HYPO (Integrase catalytic domain-containing protein n=2 Tax=Hirsutella minnesotensis 3608 TaxID=1043627 RepID=A0A0F7ZQQ7_9HYPO)

HSP 1 Score: 73.6 bits (179), Expect = 7.680e-13
Identity = 42/109 (38.53%), Postives = 68/109 (62.39%), Query Frame = 0
Query:    8 LYKRKITEDGNVVKHKRRFVARGNRQIKNLHYRE--ASSLAPAAATTKMKLSAATVQDWELRHVDFEQAYIQAPIDQEIFIGIPEEYWEFPGAVRRLDKAIYGLEQAGR 114
            +Y+ K   DG +V++K RFVA+G  Q++ + Y E  AS + P +  T   ++AA  +D E+  +D + A++   ID+E+++  PE + +  G V RL KAIYGL+QA R
Sbjct: 1006 VYRLKRGTDGQIVRYKARFVAKGYEQLEGIDYSETFASVVRPESYRTIFAIAAA--EDLEIEQMDVKTAFLYGDIDEEVYLEQPEGFEDGTGRVCRLKKAIYGLQQAPR 1112          
BLAST of mRNA_H-paniculata_contig18790.4670.1 vs. uniprot
Match: A0A2N5T525_9BASI (Uncharacterized protein n=1 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5T525_9BASI)

HSP 1 Score: 73.6 bits (179), Expect = 7.710e-13
Identity = 39/103 (37.86%), Postives = 60/103 (58.25%), Query Frame = 0
Query:   15 EDGNVVKHKRRFVARGNRQIKNLHYREASSLAPAAATTKMKL--SAATVQDWELRHVDFEQAYIQAPIDQEIFIGIPEEYWEFPGAVRRLDKAIYGLEQAGRC 115
            ++G  +++K RFVA+G  Q+  + +   ++ AP A    ++L  + A   DW +   DF  AY+ +PID+EI+I  PE     PG   RL+KA+YG  QA RC
Sbjct: 1138 DEGAGIRYKARFVAKGFTQVAGVDFN--ATFAPTATFVSLRLLLTVAAANDWPVHSFDFVAAYLNSPIDEEIWIKPPEGMTVPPGHALRLEKALYGTRQAARC 1238          
BLAST of mRNA_H-paniculata_contig18790.4670.1 vs. uniprot
Match: UPI001D03E87C (reverse transcriptase (RNA-dependent DNA polymerase) domain-containing protein n=1 Tax=Hirsutella rhossiliensis TaxID=111463 RepID=UPI001D03E87C)

HSP 1 Score: 73.6 bits (179), Expect = 7.760e-13
Identity = 43/109 (39.45%), Postives = 67/109 (61.47%), Query Frame = 0
Query:    8 LYKRKITEDGNVVKHKRRFVARGNRQIKNLHYRE--ASSLAPAAATTKMKLSAATVQDWELRHVDFEQAYIQAPIDQEIFIGIPEEYWEFPGAVRRLDKAIYGLEQAGR 114
            +Y+ K   DG +V+HK RFVA+G  Q + + Y E  AS + P +  T   ++AA  +D E+  +D + A++   ID+E+++  PE + +  G V RL KAIYGL+QA R
Sbjct: 1472 VYRLKRGTDGQIVRHKARFVAKGYEQQEGIDYSETFASVVRPESYRTIFAIAAA--EDLEIEQMDVKTAFLYGDIDEEVYLEQPEGFEDGTGRVCRLKKAIYGLKQAPR 1578          
BLAST of mRNA_H-paniculata_contig18790.4670.1 vs. uniprot
Match: A0A1Y1M2G6_PHOPY (Uncharacterized protein n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1M2G6_PHOPY)

HSP 1 Score: 73.2 bits (178), Expect = 1.050e-12
Identity = 39/115 (33.91%), Postives = 68/115 (59.13%), Query Frame = 0
Query:    2 IISTMMLYKRKITEDGNVVKHKRRFVARGNRQIKNLHYREASSLAPAAATTKMKLSAATVQDWELRHVDFEQAYIQAPIDQEIFIGIPEEYWEFPGA---VRRLDKAIYGLEQAG 113
            I+ +M ++KRK  + G ++K+K R VA GN Q K + Y ++ S      T ++ L+ +  ++WE+ H+D   AY+ A +D+E ++ IP+ + E       V  L K++YGL Q+G
Sbjct:  887 ILRSMWIFKRKYDDCGRIMKYKARLVALGNHQTKYVDYEKSFSPVIMRKTMRILLAISVRKNWEINHIDVNCAYLNARLDEETYMEIPDGFDENLNKKKYVCELKKSLYGLHQSG 1001          
BLAST of mRNA_H-paniculata_contig18790.4670.1 vs. uniprot
Match: A0A2N5W1C1_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5W1C1_9BASI)

HSP 1 Score: 72.4 bits (176), Expect = 1.880e-12
Identity = 38/109 (34.86%), Postives = 58/109 (53.21%), Query Frame = 0
Query:    7 MLYKRKITEDGNVVKHKRRFVARGNRQIKNLHYREASSLAPAAATTKMKLSAATVQDWELRHVDFEQAYIQAPIDQEIFIGIPEEYWEFPGAVRRLDKAIYGLEQAGRC 115
            M + +K   DG   ++K RFVA+G +QI  LH+ E  +      + ++ L  A    W +   DF  AY+ +PI++EI++  P+      G   RL KA+YG  QA RC
Sbjct:  324 MGFAKKTNADGTPNRYKARFVAKGFKQIAGLHFAETFAPTATFVSLRLLLVTAATHQWPVHSFDFVAAYLNSPINEEIWVKAPDGVSLPEGHAYRLKKALYGTRQAARC 432          
BLAST of mRNA_H-paniculata_contig18790.4670.1 vs. uniprot
Match: A0A511KB67_RHOTO (Gag-Pol polyprotein n=1 Tax=Rhodosporidium toruloides TaxID=5286 RepID=A0A511KB67_RHOTO)

HSP 1 Score: 72.4 bits (176), Expect = 1.890e-12
Identity = 43/117 (36.75%), Postives = 69/117 (58.97%), Query Frame = 0
Query:    2 IISTMMLYKRKITEDGNVVKHKRRFVARGNRQIKNLHYREASSLAPAAATTKMK--LSAATVQDWELRHVDFEQAYIQAPIDQEIFIGIPE--EYWEFPGAVRRLDKAIYGLEQAGR 114
            I+    +Y+RK  E G V  HK R VA+G  Q   + +R+  + AP A  T ++  L+ A  Q   +   D ++AY+   +D+E+++ IPE  +  E+ G V +LD+A+YGL+QAGR
Sbjct:  372 ILGCRFVYRRKKDEHGRVTGHKVRLVAQGFSQRPGVDFRD--TFAPVAKFTSIRVLLALAARQKMLIHQADVDKAYLHGSLDEELYMRIPEGIDSGEYSGKVLKLDRALYGLKQAGR 486          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18790.4670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2N5VDA8_9BASI1.510e-1334.48Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0C4EU54_PUCT11.610e-1333.33Uncharacterized protein n=1 Tax=Puccinia triticina... [more]
A0A2S4VZZ4_9BASI2.980e-1335.34Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N5VC64_9BASI3.020e-1335.19Gag-Pol-p199 n=2 Tax=Puccinia coronata f. sp. aven... [more]
A0A0F7ZQQ7_9HYPO7.680e-1338.53Integrase catalytic domain-containing protein n=2 ... [more]
A0A2N5T525_9BASI7.710e-1337.86Uncharacterized protein n=1 Tax=Puccinia coronata ... [more]
UPI001D03E87C7.760e-1339.45reverse transcriptase (RNA-dependent DNA polymeras... [more]
A0A1Y1M2G6_PHOPY1.050e-1233.91Uncharacterized protein n=1 Tax=Photinus pyralis T... [more]
A0A2N5W1C1_9BASI1.880e-1234.86Integrase catalytic domain-containing protein n=1 ... [more]
A0A511KB67_RHOTO1.890e-1236.75Gag-Pol polyprotein n=1 Tax=Rhodosporidium toruloi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..115
e-value: 3.2E-18
score: 66.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18790contigH-paniculata_contig18790:4412..4759 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18790.4670.1mRNA_H-paniculata_contig18790.4670.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18790 4175..4771 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18790.4670.1 ID=prot_H-paniculata_contig18790.4670.1|Name=mRNA_H-paniculata_contig18790.4670.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp
MIISTMMLYKRKITEDGNVVKHKRRFVARGNRQIKNLHYREASSLAPAAA
TTKMKLSAATVQDWELRHVDFEQAYIQAPIDQEIFIGIPEEYWEFPGAVR
RLDKAIYGLEQAGRC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2