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|
Homology
BLAST of mRNA_H-paniculata_contig1879.4669.1 vs. uniprot
Match: D8LTJ7_ECTSI (Myosin IA heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTJ7_ECTSI) HSP 1 Score: 157 bits (396), Expect = 1.040e-45 Identity = 77/96 (80.21%), Postives = 83/96 (86.46%), Query Frame = 1
Query: 1 ARGKCDDLVLLENVSNQGIVETLRNRYLAGDMYTSIGPVLIAVNPYKQLSKGGKGIYTSGVADYYQRKGGGDFMAPHIYRIASEAYKNLCKDAVDQ 288
+RG DDLVLLENVSN+GIVE LR R GDMYTSIGPVLIAVNPYKQLS GGKGIYTSGV DYY RKGGGDFMAPHIYR+A+EAYK+L D+ DQ
Sbjct: 55 SRGSVDDLVLLENVSNEGIVEVLRTRCEKGDMYTSIGPVLIAVNPYKQLSMGGKGIYTSGVRDYYHRKGGGDFMAPHIYRVAAEAYKSLQADSRDQ 150
BLAST of mRNA_H-paniculata_contig1879.4669.1 vs. uniprot
Match: A0A6H5KZ38_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ38_9PHAE) HSP 1 Score: 157 bits (396), Expect = 1.820e-42 Identity = 77/96 (80.21%), Postives = 83/96 (86.46%), Query Frame = 1
Query: 1 ARGKCDDLVLLENVSNQGIVETLRNRYLAGDMYTSIGPVLIAVNPYKQLSKGGKGIYTSGVADYYQRKGGGDFMAPHIYRIASEAYKNLCKDAVDQ 288
+RG DDLVLLENVSN+GIVE LR R GDMYTSIGPVLIAVNPYKQLS GGKGIYTSGV DYY RKGGGDFMAPHIYR+A+EAYK+L D+ DQ
Sbjct: 57 SRGSVDDLVLLENVSNEGIVEVLRTRCEKGDMYTSIGPVLIAVNPYKQLSMGGKGIYTSGVRDYYHRKGGGDFMAPHIYRVAAEAYKSLQADSRDQ 152
BLAST of mRNA_H-paniculata_contig1879.4669.1 vs. uniprot
Match: F0YAR1_AURAN (Myosin motor domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAR1_AURAN) HSP 1 Score: 83.6 bits (205), Expect = 1.070e-16 Identity = 45/86 (52.33%), Postives = 57/86 (66.28%), Query Frame = 1
Query: 10 KCDDLVLLENVSNQGIVETLRNRYLAGDMYTSIGPVLIAVNPYKQLSKGGKGIYTSGVADYYQRKGGGDFMAPHIYRIASEAYKNL 267
K DLVLL+ +S++GI L RY G+MYT IGPVLIAVNPYK L K G IY GVA +Y K + + PH+Y +A+EA K +
Sbjct: 21 KISDLVLLDEISSKGITSELSARYRRGEMYTCIGPVLIAVNPYKLLEKQGS-IYRDGVARFYYDKTPLE-VTPHVYSVAAEALKGM 104
BLAST of mRNA_H-paniculata_contig1879.4669.1 vs. uniprot
Match: A0A7S2WIM6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WIM6_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 8.510e-15 Identity = 42/95 (44.21%), Postives = 59/95 (62.11%), Query Frame = 1
Query: 4 RGKCDDLVLLENVSNQGIVETLRNRYLAGDMYTSIGPVLIAVNPYKQLSKGGKGIYTSGVADYYQRKGGGDFMAPHIYRIASEAYKNLCKDAVDQ 288
+GK DDLVL+E VS + IV+TL R+ D+YT IGPVL++VNP+K++ G+Y V D Y K + + PH+Y IA AY+ L + Q
Sbjct: 8 KGKVDDLVLIEQVSQEEIVQTLNRRFKQKDIYTYIGPVLLSVNPFKRIG----GLYGQDVIDRYVDKMDYE-LPPHVYAIAENAYRALNRSGEKQ 97
BLAST of mRNA_H-paniculata_contig1879.4669.1 vs. uniprot
Match: L8GGA4_ACACA (Myosin IF, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GGA4_ACACA) HSP 1 Score: 77.0 bits (188), Expect = 2.170e-14 Identity = 40/90 (44.44%), Postives = 58/90 (64.44%), Query Frame = 1
Query: 16 DDLVLLENVSNQGIVETLRNRYLAGDMYTSIGPVLIAVNPYKQLSKGGKGIYTSGVADYYQRKGGGDFMAPHIYRIASEAYKNLCKDAVD 285
DDL+LL+++SN+GI+ TLR+RY A +YT IG VLIA+NPY+QL G + S Y + PH+Y IA +AY++L + V+
Sbjct: 9 DDLILLDDISNEGILNTLRSRYNANLIYTYIGQVLIAINPYQQLPVYGPNVIKSYQDRYIFEE------PPHVYAIAEDAYRSLLTEGVN 92
BLAST of mRNA_H-paniculata_contig1879.4669.1 vs. uniprot
Match: A0A8J4UZ80_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UZ80_9MYCE) HSP 1 Score: 75.9 bits (185), Expect = 5.520e-14 Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 1
Query: 16 DDLVLLENVSNQGIVETLRNRYLAGDMYTSIGPVLIAVNPYKQLSKGGKGIYTSGVADYYQRKGGGDF-MAPHIYRIASEAYKNLCKDAVDQ 288
DDLV+L VS + +++ L RY G +YTSIGPVLI++NPYKQL GIY + Y KG +F + PHIY IA +AY++L + +Q
Sbjct: 11 DDLVMLTEVSEKSLLDNLNQRYKDGVIYTSIGPVLISLNPYKQL-----GIYGKDQINLY--KGKHEFEIPPHIYSIADKAYRSLLSERENQ 95
BLAST of mRNA_H-paniculata_contig1879.4669.1 vs. uniprot
Match: F0ZZR8_DICPU (Myosin IA heavy chain n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZZR8_DICPU) HSP 1 Score: 75.5 bits (184), Expect = 7.540e-14 Identity = 41/92 (44.57%), Postives = 61/92 (66.30%), Query Frame = 1
Query: 16 DDLVLLENVSNQGIVETLRNRYLAGDMYTSIGPVLIAVNPYKQLSKGGKGIYTSGVADYYQRKGGGDF-MAPHIYRIASEAYKNLCKDAVDQ 288
DDL++L VS + ++E L++RY G +YTSIGPVLI++NPYKQL GIY + Y KG +F + PHI+++A +AY+ L + +Q
Sbjct: 14 DDLIMLSEVSEKALLENLKDRYKEGLIYTSIGPVLISMNPYKQL-----GIYGQDNINLY--KGKHEFEIPPHIFKVADKAYRALKSEGENQ 98
BLAST of mRNA_H-paniculata_contig1879.4669.1 vs. uniprot
Match: F0Y138_AURAN (Myosin motor domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y138_AURAN) HSP 1 Score: 75.1 bits (183), Expect = 1.030e-13 Identity = 42/93 (45.16%), Postives = 58/93 (62.37%), Query Frame = 1
Query: 16 DDLVLLEN--VSNQGIVETLRNRYLAGDMYTSIGPVLIAVNPYKQLSKGGKGIYTSGVADYYQRKGGGDFMAPHIYRIASEAYKNLCKDAVDQ 288
DDL+LLE +++ G+ + L RY +MYT+IG VLIAVNPY+ L +GGK IY VA +YQ + PHI+ + + AY L +D DQ
Sbjct: 3 DDLILLEEAQLTHGGLSKELSARYKRDEMYTAIGEVLIAVNPYRVLERGGKSIYGEDVALHYQ-EAILHLQKPHIFGVGAAAYNALVRDGEDQ 94
BLAST of mRNA_H-paniculata_contig1879.4669.1 vs. uniprot
Match: A0A482SVD4_9ARCH (Myosin motor domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVD4_9ARCH) HSP 1 Score: 70.9 bits (172), Expect = 2.160e-13 Identity = 34/84 (40.48%), Postives = 55/84 (65.48%), Query Frame = 1
Query: 16 DDLVLLENVSNQGIVETLRNRYLAGDMYTSIGPVLIAVNPYKQLSKGGKGIYTSGVADYYQRKGGGDFMAPHIYRIASEAYKNL 267
DDL+ L++V+ GI+ TLR+R+ + +YTSIGP+L+A+NP+K ++ GIY V D Y+ PH++ +A +AY +L
Sbjct: 65 DDLIKLQHVNRPGILHTLRSRFYSDKIYTSIGPILVALNPFKWIA----GIYEEEVKDRYKDNSFNLSENPHVFAVAHDAYCDL 144
BLAST of mRNA_H-paniculata_contig1879.4669.1 vs. uniprot
Match: A0A7S3ZHU7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZHU7_9EUKA) HSP 1 Score: 70.9 bits (172), Expect = 2.360e-13 Identity = 36/96 (37.50%), Postives = 59/96 (61.46%), Query Frame = 1
Query: 1 ARGKCDDLVLLENVSNQGIVETLRNRYLAGDMYTSIGPVLIAVNPYKQLSKGGKGIYTSGVADYYQRKGGGDFMAPHIYRIASEAYKNLCKDAVDQ 288
++ DDLV+L+ +S + IV+ L+NRY ++YT IGPVLIAVNP+K++ KG YT G Y+ K + + PH++ +A + + + +Q
Sbjct: 12 SKNALDDLVMLDRISEENIVKCLQNRYNQDEIYTYIGPVLIAVNPFKRI----KGYYTEGKIREYRGKKFYE-LPPHVFALADDTHNQMINKRENQ 102
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 156.0 |
| Seed ortholog evalue | 8.9e-36 |
| Seed eggNOG ortholog | 2880.D8LTJ7 |
| Preferred name | MYO1D |
| KEGG ko | ko:K10356 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000041,GO:0000146,GO:0000166,GO:0001726,GO:0001891,GO:0002009,GO:0002165,GO:0002250,GO:0002252,GO:0002253,GO:0002376,GO:0002429,GO:0002431,GO:0002433,GO:0002443,GO:0002449,GO:0002456,GO:0002460,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003006,GO:0003008,GO:0003674,GO:0003774,GO:0003779,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005516,GO:0005524,GO:0005543,GO:0005546,GO:0005547,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005654,GO:0005730,GO:0005737,GO:0005768,GO:0005769,GO:0005783,GO:0005790,GO:0005829,GO:0005856,GO:0005884,GO:0005886,GO:0005902,GO:0005903,GO:0005911,GO:0005938,GO:0006605,GO:0006612,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006886,GO:0006887,GO:0006892,GO:0006897,GO:0006909,GO:0006911,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006955,GO:0006996,GO:0007010,GO:0007015,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007444,GO:0007483,GO:0007484,GO:0007485,GO:0007498,GO:0007548,GO:0007552,GO:0007560,GO:0007600,GO:0007605,GO:0008022,GO:0008064,GO:0008092,GO:0008104,GO:0008144,GO:0008150,GO:0008154,GO:0008289,GO:0009267,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009791,GO:0009799,GO:0009855,GO:0009886,GO:0009887,GO:0009888,GO:0009892,GO:0009893,GO:0009925,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010008,GO:0010033,GO:0010324,GO:0010468,GO:0010563,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010647,GO:0010921,GO:0010923,GO:0012505,GO:0012506,GO:0015031,GO:0015629,GO:0015682,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0016197,GO:0016323,GO:0016324,GO:0016328,GO:0016459,GO:0016461,GO:0016462,GO:0016477,GO:0016482,GO:0016604,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017016,GO:0017076,GO:0017111,GO:0017160,GO:0019220,GO:0019222,GO:0019899,GO:0019904,GO:0022414,GO:0022607,GO:0022610,GO:0023051,GO:0023052,GO:0023056,GO:0030001,GO:0030011,GO:0030027,GO:0030029,GO:0030030,GO:0030031,GO:0030033,GO:0030034,GO:0030036,GO:0030041,GO:0030046,GO:0030048,GO:0030050,GO:0030054,GO:0030139,GO:0030175,GO:0030334,GO:0030335,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030539,GO:0030554,GO:0030587,GO:0030659,GO:0030673,GO:0030705,GO:0030832,GO:0030833,GO:0030838,GO:0030863,GO:0030864,GO:0030898,GO:0030900,GO:0031090,GO:0031143,GO:0031152,GO:0031252,GO:0031253,GO:0031256,GO:0031260,GO:0031267,GO:0031272,GO:0031273,GO:0031275,GO:0031276,GO:0031323,GO:0031324,GO:0031334,GO:0031344,GO:0031345,GO:0031410,GO:0031589,GO:0031667,GO:0031668,GO:0031669,GO:0031941,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0032009,GO:0032271,GO:0032273,GO:0032386,GO:0032388,GO:0032420,GO:0032421,GO:0032501,GO:0032502,GO:0032528,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032587,GO:0032589,GO:0032879,GO:0032880,GO:0032940,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033157,GO:0033267,GO:0033554,GO:0033572,GO:0034097,GO:0034341,GO:0034613,GO:0034622,GO:0035091,GO:0035112,GO:0035126,GO:0035215,GO:0035239,GO:0035295,GO:0035303,GO:0035305,GO:0035639,GO:0035924,GO:0036094,GO:0036477,GO:0038084,GO:0038089,GO:0038093,GO:0038094,GO:0038096,GO:0040011,GO:0040012,GO:0040017,GO:0040029,GO:0042221,GO:0042330,GO:0042594,GO:0042623,GO:0042742,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043086,GO:0043167,GO:0043168,GO:0043207,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043325,GO:0043327,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044291,GO:0044297,GO:0044304,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044448,GO:0044451,GO:0044459,GO:0044463,GO:0044464,GO:0044764,GO:0044853,GO:0044877,GO:0045056,GO:0045087,GO:0045121,GO:0045160,GO:0045177,GO:0045178,GO:0045184,GO:0045335,GO:0045815,GO:0045936,GO:0046661,GO:0046903,GO:0046907,GO:0048193,GO:0048306,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048565,GO:0048569,GO:0048583,GO:0048584,GO:0048608,GO:0048707,GO:0048729,GO:0048731,GO:0048803,GO:0048805,GO:0048806,GO:0048808,GO:0048856,GO:0048870,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050877,GO:0050896,GO:0050900,GO:0050954,GO:0051015,GO:0051017,GO:0051020,GO:0051049,GO:0051050,GO:0051128,GO:0051129,GO:0051130,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051258,GO:0051270,GO:0051272,GO:0051336,GO:0051346,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0055123,GO:0060171,GO:0060255,GO:0060322,GO:0060341,GO:0060429,GO:0060491,GO:0060562,GO:0061024,GO:0061458,GO:0061502,GO:0061572,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070685,GO:0070686,GO:0070727,GO:0070848,GO:0070887,GO:0071310,GO:0071345,GO:0071346,GO:0071363,GO:0071496,GO:0071702,GO:0071705,GO:0071840,GO:0071907,GO:0071944,GO:0071976,GO:0072512,GO:0072657,GO:0072676,GO:0072678,GO:0090066,GO:0090087,GO:0090150,GO:0090287,GO:0090313,GO:0090314,GO:0090316,GO:0090598,GO:0090702,GO:0097159,GO:0097367,GO:0097435,GO:0097440,GO:0097447,GO:0097458,GO:0097708,GO:0098542,GO:0098588,GO:0098589,GO:0098590,GO:0098630,GO:0098657,GO:0098743,GO:0098805,GO:0098857,GO:0098858,GO:0098862,GO:0098927,GO:0099024,GO:0099080,GO:0099081,GO:0099120,GO:0099512,GO:0099513,GO:0099515,GO:0099518,GO:0099568,GO:0110053,GO:0120025,GO:0120031,GO:0120032,GO:0120033,GO:0120035,GO:0120036,GO:0120038,GO:0120117,GO:0150034,GO:1900076,GO:1900078,GO:1900746,GO:1900748,GO:1901265,GO:1901363,GO:1901888,GO:1901981,GO:1902547,GO:1902903,GO:1902905,GO:1902936,GO:1903533,GO:1903827,GO:1903829,GO:1904951,GO:1905475,GO:1905477,GO:2000145,GO:2000147,GO:2000810 |
| EggNOG free text desc. | translation initiation factor activity |
| EggNOG OGs | COG5022@1,KOG0164@2759 |
| Ec32 ortholog description | Myosin head, motor domain |
| Ec32 ortholog | Ec-02_005860.1 |
| COG Functional cat. | Z |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01009,ko03036,ko04131,ko04147,ko04812 |
| Exons | 3 |
| Model size | 289 |
| Cds size | 288 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1879.4669.1 >prot_H-paniculata_contig1879.4669.1 ID=prot_H-paniculata_contig1879.4669.1|Name=mRNA_H-paniculata_contig1879.4669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=96bp
ARGKCDDLVLLENVSNQGIVETLRNRYLAGDMYTSIGPVLIAVNPYKQLS
KGGKGIYTSGVADYYQRKGGGDFMAPHIYRIASEAYKNLCKDAVDQ back to topmRNA from alignment at H-paniculata_contig1879:15236..22660+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1879.4669.1 ID=mRNA_H-paniculata_contig1879.4669.1|Name=mRNA_H-paniculata_contig1879.4669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7425bp|location=Sequence derived from alignment at H-paniculata_contig1879:15236..22660+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTCGGGGGAAATGTGATGATCTAGTCCTGTTAGAGAACGTCAGCAACCA
AGGCATCGTGGAGGTAAGGCATGAGGGTGGGTGCATGAGGGCTTCGGACT
GTGGGATCATTCCTTGAGTATTTACGTAGTTACCCTCTGTAAGTATGTGC
ATGTATCTATGTAGATGTATGTGTGTGTCCTTTGGTGCGGTCTTCGCAGT
AGCGGCATCATATCTGTACTGTACCACTGAGCGGCTTTCAGACACCCTCG
TTGGCGATGGGAGCAGACAGCACTAAATGGCTGACCGACGGTTTGTCTGT
ACTGGCTGCAGTATAATATATTCCTACCCTACACTGCAGTACATGTGCAG
TATGTGCGTATGCTGCGTTGGAATGTTGGTTCTCATTTCGGCCCATGTTC
GGAAGGATAGAAGTAACTTGATTTGTTCTTGACAGATGATGCAACGATGA
TGTTTCTCTGGGCACGCTAATACAGTCGGTAGCATGATATACATCGAGGG
CAACTTGCCAAAGTGATTCTAGATTCGTGAGGGTGAGAAGCTGTGAGTTG
AAAAACAACCCGATTTCCGGACCACAGCCAGAACGAGAAAATCTGAATGA
ACTAACCTCACGAAAGATGGCATTGCGAAAGAACGTCAAACACTGCATCC
AGTCGCTGTAGGTAAAGCTATGTCATCTATATTGTGGGTCATGGACTGTC
TGTCTCTGCAGCTGTGATTCCCAATTTTACCTGGTGATCATGTCATCTCA
ACCGAGACGCGGATTGGACAAGCGCTGTTGGCAGTTTCCAGGTACTCTAG
TGTCATTTCGAATGTGTTTCTCTGCTTGATGATATCTGCTTGATGATGGC
TCCAAGCACCCTCGAAAGAATGTTGGAAACATATTGGAACTCTGGAAATA
AAAGCCTAGTGTAAGCAAGCGGCTCGGGGTTGTGTGCGTGATTTTCCGAA
ATGATGATGATTGATGGATGGATGCATGCCGCTGGCTGGTAAGTTCTATT
TTTAGGATTCAGGCGTCAGCAGGACGCTCATATCACAGTCATCTCAACCA
TGGCGGTGACAAACCAAAAATTCTGTAGTGTACGATTTACAGTTTATAGT
ACTCTACTGTATACTCCTCTACTGTATCCGAGACGAACCTTTCCAATCAT
AGAGATCGTACAGTAGATCACTCCAGAGCTGTATAGTTTTGGCTGTGAGC
ACGTATGATGTTAACGGTGGAAGTAGCCGTTTGTATATGAATCATGTATG
CCACAGCAAACACAGTAAAACTACGGTAACTGTTTTTGCATTGTCCTACT
TTGTCTGTACTGCTGTGTACTTGTGCGGTCAGTATTCTGCAAGCGATGGT
AGCTCTATACTAGAGATACGTGCAGTCGCTACGGTAGGAGGGTTAGACTT
AGTTCAGCTGTATGGTATATATATATATATTGTATATTGCCGCACATGCA
TACCATGTGCCTCTCTGGATGCTATTGCCTTTGTATTTCAGATTCTTCAC
CCAGGTGAGGGGCGAGAACACGAGAATTATTGAACGCCAAAAATATCTAC
TAATAGTGAGGATTGTGGGTCAACGGACTCTCTTTCGCAATTGTGCGGCC
GCACGCATGGTAACCATGTCAATATTGATCACAATTAAATAGGACTTGCG
CGAGACGGGATACCCCGTTGTACTTATTGGCGGTACAAAAATGACACGAT
GCAGCAGTATCAGGCATTCTTGGTCGGGGGGGGCGGGAATGGTTTGGGGT
TGCTCCGAGTTCCTCAAGTGTTCAACTAATAATGTTAATAATGTGAATAT
ATGTACTTGTAGTAGGTTGTACATCGAAAACACAATACTGCATCGCATCG
ATGCGACCTGCGGCCCCTAAAGGCGGTCGGTATTTCGCACAAATATTCCC
GCGTACACATGATTTATACAAAACAGTCATTGCGAGCCAAGAAGCTAATA
CGATACAGTGCACACCACTATTGAACGTGAAGATGTGATTAGCACAAAAG
ATACACCTTCAATCGAATATCCCTCTGTCCCGGGACAAGGCGCGGAACCC
CGTTAAAACAGGAGAAGGCAGCCGCCGTCTTATTCCACATTTCAAATAAC
GTAACGTATGGCGCCCCCCTTCCGTCGAGAAAAAGCACCGGGCACGATTG
CTTGTAATTTTGCTGACTGCATTTCGAACCCCATCTATAAGTTTGCACAT
ACATTTGAGGGCTCATCATCCGTATACTCCCTACCCGTGCAGACAATCAG
GTGCTAATGGTGCGAAGGCTATGCATGACCCGTGGAATTTCATGTACGCA
ACGTAATGACATGTGCGCATCACTGGGAAGGGTTCGTTGGATGTGTGTAC
GTTTATGAACCCGAAGAGCTCCAACGTTCGCAACAGCAGACACAGGGCAT
GCCGAGGGAAAAAATACATTTCAGATTCTTGATTTGAACGATTGTGCAAA
ACAATGGATGGTTCCTTTTAAGGCACACACCCCTATTGAAGCACATGCCT
CTTTAAGGGCACTCAAATAGCGTGTCCCCAACTGGCCCCCACTTAAAAGG
GAGTACACACCAAAATAGGGATGGTACTCAGGACGAACTAGATCCACCTG
ACGACGAAGTACAGGTCGCAGACGCCGGTACAAAGAGCGAGAAGAGAGTT
GCACTACCCCTGTACAGCAGTATTTCAAAAGAGTTCAAAGTTCTAGAGAA
GCAGACGGAGCGGTGTGATATTGAGGGGGCATGTGCTGGGCTTTGTAGGG
CCAAGGTGGCTTTCATTCAAGCATACTCTATGGGGCCTGCTAGCCAGATT
GATGTGTGCAATTTCTTCCATGGGATCTCTTCTTGAAACCCGCAACGGGG
TTTGAAGAACCATGCGATTGTTCTTGGGTCGAGGGGATCTAGGGCTTTGC
AGTGCTTCTCATATCGTATCTAGCTCCTGTGTGTTGTTGCTTTACTCCTA
CGGTAGGGATTGTTCAAGGGGCTTGGAGATTTTTTGCTATGGTGAGAAGA
TATTCATTATGGGCTTTTGTTTGTGAGGTGACTCCACATAGAAGGCCAAG
TTTGTTTGTGTTTCTTTTTTTGGGGTCATGGTTGAAGCTTTTGTTGCTCT
TTCTCTGTTCTGCGCAAGGATGCCCTTTATTCGGTGCTGTATGGGGTGGC
GTTGCTCAAGGAACCAAACAATACATGTAATTTAATTTAAATATACTGAT
GATAGTAAAAATGAAGGGAAATCAGACTTGAACACCATCTTCGGTGGTCT
TCATGCTTTGAGTAATGACCAACGAGTCGGATACAACACATTCCGACCAC
GTGCGCACTTACTTCAGGTTGCGTGCAGGGTTTGGGCCCCTTTGAAGGTA
CAGTGTGCCCTAACCCTAACCCCTAAATATATTTATATATAATTTCTTAT
ATATATATTTTCAAACTACATCTTATGCAGTCTAATCTCCTCCCCGTATG
AAATCCATTTCCCGGGTACATGGACTTCCAATGCCCGATGGCACCGGCGA
AATCATCTTACAACCTGTCCGCGAAAAAATACAATATTGACGAAAACAGA
CGTTCAAAATATCGGGATTCAACATTTTTCGGTGGCTCGCTGACCTAGCC
TAGAGATAACCTGGTTGTTCTTGCAGGCGGGAAAATCGAGAAATCGACGC
GGGCCAACTAGCAACCGGCAAAATTCGCACCGGGCCAACCAGTCACCATG
CAGATCTGTCCATGGCCAACCGGCATAGACATGTGCGCCAGACACGCAGT
ACTAGGCGCAATAAGTAACGTTTCGGGTGGGAACACAACGTCTCGTTTCA
CCAATATTTTTTTACTCCTGGGCATAGGTTGTGTTGCGATTGGAAAAATT
TTGTTACTTTTCGGGCCATTGTGGTTTCAAGTCGAGACATCGACTTTCGG
TCAGGCAGTAAAGCTGATGGCAGCCACGGGTTGCCAACGGCCTGGCAAAC
TACTGCCCTATGTGTCGATGTGCTTGAAATGTAGAACCCTGACAATCAGC
AAAGATGAAATGACGATCAGTAGCACGAACAAACAAACGCAAGACTTATC
AGGAGGTATGCCGTGTAGATTCCCAACCGCACTAGGTACTCACGGTATTA
TTGATGGCAAGTAGCACGCGTAGTTCGGACGATTGGGCGTGTCGTCCTTG
ATTTTGCAACGCTCACCCGCTACACAAGGCAGACTGAAGACCTAAATAAG
TTTACCCGCAGTACAAGAGATGCAAATGTGGTTCTGGAGGATGACGGCGT
GTGTATAAAGCGGGGATGGAGGACACACAAGGACAATACGCCGTATAGAT
GAGCGTTCTCAGTTGGGGTGCTCTCTATGAGGACCTTGGCGAGTGATCTC
CTGTAAACGTGTTCCCAGGTCGTGCGTACTCAAAATACCTTGAGTTGGAC
GTTTACGCACGTCTGTTTTACCTCTTGTTGCATTCCTCACGAGCACAAAG
ATACTTAGGAGGCGTGTTCAGGAAAAAACTAGTACCGACTAAAACCCACC
GACGGCATTTCTGCCCACGGTATTTGTTCAGGGCTGAACTAACCTAGAGA
TAACCTATGAACATGTGCTAAAGATACGGGGTAGATGGAGAAGATCCTGT
TTTTATTGCATATGTGTAGAGAGCTCGAAATTTGAAAATTATTATATTAA
TACATGGTCGGTCACCCGTAATATTTCGTGTTTTCGTGTATACAGACAAA
TGATGAAAACACCATTCGGTTAACGCCTGATGAACAGGATTATCACACTC
GTCAGTTACCCTTCAAGTATTGTCTATCCGGTCCGACGTCTTCCTCAAAT
CAAACAGATGCAGCATTCATACCAGATTTCTCGCTTTATTCGTGTCTTGT
ATTCGTATTTGTCCGGGGGGTAAAACTATCACATGTGTCATCCTCCAGAA
ACCCCACCGACAGCTTCTCTCCGTTTGCTCGGCCTGTGCGGCACTAGATA
CCATACCTAGAAGGCGTTTACCTCAAGCCGTGGGTGCGCGTCTAATATTT
CATGTTGCGTTGTTTATTCTTAGCCAAGGTAACACCATACAAGAGCGCTT
TCGGCATACCCACACGCGGCACAACAAGCGAGATATTGACACCTAATTTA
GACGAGACCTAGCTACCTTTCGCCATGTTCGTCTTGTCATGTTTACACAC
ACCTCCTCCTGTCTCTCTCTCTCTCTCTGATTGGCTTTTTGTTAGACGTT
GCGCAACCGCTACTTGGCGGGGGACATGTACACGTCTATTGGGCCTGTGC
TGATCGCAGTCAACCCGTACAAGCAGCTTTCTAAGGGAGGAAAGGGAATT
TACACGTCGGGTGTGGCAGATTATTACCAACGCAAGGTAGGGTGAGAAAT
GACGTCATGACCAATTTGTACTTTTTCAGTGTTGTCTACTTGAAGGGGTC
ACGGGATCTCTTTTTATGCTATGAAGTAGTGAGTATTTGGTCATGATCCA
TTGGTGGAAATCTTCCATCCTCCGGATGAGTTCGATTTATACCTGGAGTA
GTGCTCAAGATATAAGTAATGTTGATTCTGTGTGCCCCGAACCAGCTACG
ACTGATATGAAAAATGGTAAAAATGAATAAACGGGGGTCGAGACTGTACT
ATACGTGTCATGATCCATCCCACTGATTCTGAAAACTGAGACGAGTATAC
ATGCCTCTGTATTGCGTTAGAAACGCTCGTGAAGTATTTGCCTTCGTCAC
TGTACAGGGGATAGATAAAATGTTCAAACGTGAAAGGTTTTTCCATGTCC
ATAGCCTTCCGTATCTATGGTTGAACCGACCCTTTGTGTGTCAAGCTGAG
AAATGCATCCTGCTTGTCAAACCTGCGAAGCTACCAAAATGTCGCCCGGA
TGTGTTGTATGTTGAAATGGCCAAATGGTCTAAAGGGGCACATTCAATAG
CTTTAAGGAACAGCTCTATTCTTTTTTTTTTTTGTGTGTGTGTTAGTGGT
TGCATACACGTTACCGCCTTACACCCCGTGTCTGTAACCCGTGTAGCCCT
CGGCGCTATGTAGGTAGCTTGGGCTGTAGAAAACTTGCAGAACGAACGCA
GTTGAAATGTAAAAAGCTATGGCTGTGATTTTCCGTTGGTCGTTTGTTCG
TTTCGTACTTTATATTCATACAAACTTTCAGCAAAATTGCCATAGTTGGA
GTATTATACTCAGCGTCAGGATTTGGTTGCGGGCTGTGGCTTGTTCACTA
TGTCTCACCCTGAATCGAGATCCTAGCTGAGACGCGAGAGGTGTATTGAA
GAGTATTAAGACGAACCTAGTTTGTTTTGACTTTGCGTTTTTGGCAGATG
TGGCGTACTGGCTCAACTTTATCGATAGTCGACCGACAACCGAATCCCTG
TTTGCGTCAAGTATTCGAGTATGCTGTGCCGTTGGATACAGAAGCGATTG
CAAGCTAGGTGTACCTACTTCCGCTGAAACTCTCACTCTCTCTCCGTTCT
GCTAAATGCATTCGTGCCGCAGTCGGTGAAGCAATGAACACGCAATACGA
TGCCCTGAATTCGCAGAATAACGAGGGTGTCGCGTGGATAATTTGCACCC
TGAGGCCGTTTCTTCATGGGCGTCGGAAAGTTTGGTTTTGGAAGTTTGAT
TTTTTCAAAATTTAAACGGAGAATGGGATGCTTTTTGAGTGATTAGGTGT
CATACGATGTTCTTTTTACTCAAGTATAGAGAGCACATCACAGCTTACGT
CACGGAGTGATTATTGGAGCAGAATTTTGTGCATAGGGTATTGGTACTCT
GGTGCATGGCGTGGGTTGTTCGAAACTTGAGCACATGATGTTGACCACAG
CCGTAGCGCTTCCCTGGTTAGCGACAGGATAGGCAATGGTTGAAACTTGT
GCAAAAATCGGTCACTTACGCCGTATCTTAATGGCGTTAGAAGAAACTAG
ATATTGTCTTGGATTAAAATCAACTTGTTCTGCAACCATGTATCAAAAGA
TAGCACGCTTCAAATCGAAAAATGCGTCCATATCATGCTGGGTAATGGGG
GTGTTGGGCCTGTTTTTCTTCATCTTGCTTCAATTTTGTGAGCACAAGCT
TGTAGAAAGTTCTCGGTTTTACTCATGTTGAAAATTGACTTTCTTCTGAC
GCCTGTAAGAAATGACCGTACGTGCCGGAAATTTCTAGAAACTCGCTCGT
CCTTGTGGACGTCAATACCCACCTCAGTCGACACCGGGACGTTTTTCTTG
TTTCCTTTTTCTAGATAAGACACCATCTACAAGGTACGGTTCTTCTGTGC
AATACTGTTTTTTTTATCGCCGCTCGTTAGTCATTTTTTTCGTGTATAAA
TCGCATTTCGCTTAACGTGTCCCTTGCCTTGCTTCTTTCAGGGAGGGGGC
GATTTTATGGCACCACACATTTACCGCATCGCGTCGGAAGCGTACAAGAA
CCTTTGCAAGGACGCAGTAGACCAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1879:15236..22660+ >mRNA_H-paniculata_contig1879.4669.1 ID=mRNA_H-paniculata_contig1879.4669.1|Name=mRNA_H-paniculata_contig1879.4669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=576bp|location=Sequence derived from alignment at H-paniculata_contig1879:15236..22660+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTCGGGGGAAATGTGATGATCTAGTCCTGTTAGAGAACGTCAGCAACCA
AGGCATCGTGGAGGCTCGGGGGAAATGTGATGATCTAGTCCTGTTAGAGA
ACGTCAGCAACCAAGGCATCGTGGAGACGTTGCGCAACCGCTACTTGGCG
GGGGACATGTACACGTCTATTGGGCCTGTGCTGATCGCAGTCAACCCGTA
CAAGCAGCTTTCTAAGGGAGGAAAGGGAATTTACACGTCGGGTGTGGCAG
ATTATTACCAACGCAAGACGTTGCGCAACCGCTACTTGGCGGGGGACATG
TACACGTCTATTGGGCCTGTGCTGATCGCAGTCAACCCGTACAAGCAGCT
TTCTAAGGGAGGAAAGGGAATTTACACGTCGGGTGTGGCAGATTATTACC
AACGCAAGGGAGGGGGCGATTTTATGGCACCACACATTTACCGCATCGCG
TCGGAAGCGTACAAGAACCTTTGCAAGGACGCAGTAGACCAGGGAGGGGG
CGATTTTATGGCACCACACATTTACCGCATCGCGTCGGAAGCGTACAAGA
ACCTTTGCAAGGACGCAGTAGACCAG back to top
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