prot_H-paniculata_contig1879.4668.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1879.4668.1
Unique Nameprot_H-paniculata_contig1879.4668.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length506
Homology
BLAST of mRNA_H-paniculata_contig1879.4668.1 vs. uniprot
Match: A0A6H5KYC8_9PHAE (RNase III domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYC8_9PHAE)

HSP 1 Score: 419 bits (1077), Expect = 9.030e-139
Identity = 244/417 (58.51%), Postives = 286/417 (68.59%), Query Frame = 0
Query:   25 VEESLGYRFGDKRLLLTALTHRSFCNENNTGTGDFDELEWLGDSVLQLAVSSWLFRTAQGSRRSSGNLSLTRVRFVDAGACESFAKKLKLHPFLRIGHGQPVAGTKILADCFEAVLGAVYVDAGDCTDLAEIHRILSRVIPSYEFERRPHPTRPQSLHSQPAPQHPPSRHPISSGHFPLPSPPPHAVAQEQRKVRGEEPRKIMNLAHRVIQIAKNSNGEEAGVRGTEHQGASAHLPS--------NGVQPDRHEVLRELDGRLRDFQQIILRGGALSYSTAACAEAFGEEVAWFYARTAT-TPRQCVLLDSVLAEESMLKKEFSEAPPGAELVVMEVVIVPAELRLQCFTVVEYLLVNILRQD----VPSHQQAVRLFKSTPHGIETLKLLEIIINESASSLLFTTRQRSVISARLA 428
            VE +LGYRFGD+RLLLTALTHRSFCNE +T +GDFDELEWLGDSVLQLAVSSWLFR+A+GSRRSSG LS TR RFVD+ ACESFA++L L P+LRIGHGQPV GTKILADCFEAVLGAVYVDAG C+DL  IH IL+RVIPSY+ +RR        L     P HP  RHP S  H  +  PPP   A        E PRK+MNLAHR+ QIAK       G  G   Q      P+        NG   D  EV+RE DGRLRDFQ  +LRGGALS+S+ A A AFGE+ A F++  AT  P +C LLDSVL   SML+K F  APPGAE VVMEVV+VP+ELRLQ FTVVE+LL N+L+       P+    +RL +S PHG  T+  L  I+ E+A++LL    QR+ ISA +A
Sbjct:   17 VEHALGYRFGDRRLLLTALTHRSFCNETHTASGDFDELEWLGDSVLQLAVSSWLFRSAKGSRRSSGQLSATRQRFVDSHACESFARQLNLLPYLRIGHGQPVGGTKILADCFEAVLGAVYVDAGGCSDLEPIHAILARVIPSYKHDRR--------LQVPRQPPHP--RHPHSHPHGAM-EPPPGPPA--------EGPRKLMNLAHRLTQIAKRDADRVEGGGGRAAQPMQGDAPASPPLSRAANGSDRDPLEVVREFDGRLRDFQGNVLRGGALSFSSRAFAGAFGEDEARFFSAVATGCPERCALLDSVLDGSSMLRKHFDGAPPGAERVVMEVVLVPSELRLQTFTVVEFLLNNVLQPQGGSGEPADNPVLRLIRSAPHGDATIAFLSSIVTETATNLLLNAHQRATISAGVA 414          
BLAST of mRNA_H-paniculata_contig1879.4668.1 vs. uniprot
Match: A0A835Z0E4_9STRA (RNase III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0E4_9STRA)

HSP 1 Score: 140 bits (354), Expect = 5.080e-32
Identity = 78/153 (50.98%), Postives = 99/153 (64.71%), Query Frame = 0
Query:   24 AVEESLGYRFGDKRLLLTALTHRSFCNENNTGTGDFDELEWLGDSVLQLAVSSWLFRTAQGSRRSSGNLSLTRVRFVDAGACESFAKKLKLHPFLRIGHGQPVAGT--KILADCFEAVLGAVYVDAGDCTDLAE---IHRILSRVIPSYEFER 171
            A E +L Y F +K LLL ALTHRS+CNEN T TGD D LEWLGDSVLQ A+S WL+ +   + RS   L+  R +FVD  AC  +A +L L   +R GHGQ   GT  K+ ADCFEAVLGA+Y+D+   +  A    I R+L+ VIP++   R
Sbjct:  394 AAEAALRYTFSNKLLLLQALTHRSYCNENRTATGDNDALEWLGDSVLQHAISDWLYNSF--AERSVHKLTDLRQQFVDTTACADYASRLGLPDMMRTGHGQATRGTNTKVSADCFEAVLGAMYLDSRSMSPDAPFVPIFRVLADVIPAFTGAR 544          
BLAST of mRNA_H-paniculata_contig1879.4668.1 vs. uniprot
Match: A0A835ZIJ8_9STRA (RNase III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIJ8_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.690e-24
Identity = 73/175 (41.71%), Postives = 102/175 (58.29%), Query Frame = 0
Query:    2 ASSVVDVGNGLIL------DEQCIQGIW-AVEESLGYRFGDKRLLLTALTHRSFCNENNTGTGDFDELEWLGDSVLQLAVSSWLFRTAQGSRRSSGNLSLTRVRFVDAGACESFAKKLKLHPFLRIGHGQPVAGT--KILADCFEAVLGAVYVDAGDCTDLA---EIHRILSRVI 164
            ASS++ +   + +      DE+ +Q +  A EE+LGY F D+ LLL ALT +S+ NE  + TGD   +EWLGD VLQ AVS WL+ +   + R  G ++  R  +VD  AC  +A+ L L   LR G G   + T  K+ AD FEAVLGAV++D  D    A    + RIL++VI
Sbjct:   37 ASSIIGIATTIGMLRAPSADEEGLQSLVPAAEEALGYEFLDQMLLLQALTLKSYVNEVESATGDNGAMEWLGDCVLQHAVSDWLYTSTAATHRQEGRMTERRKAYVDTTACARYAQCLGLPRLLRTGAGASASLTSRKVQADAFEAVLGAVHLDCRDAAAAAVPSPVVRILAKVI 211          
BLAST of mRNA_H-paniculata_contig1879.4668.1 vs. uniprot
Match: UPI0006802D7F (ribonuclease III n=3 Tax=Anaeromassilibacillus TaxID=1924093 RepID=UPI0006802D7F)

HSP 1 Score: 105 bits (262), Expect = 2.660e-22
Identity = 63/151 (41.72%), Postives = 89/151 (58.94%), Query Frame = 0
Query:   26 EESLGYRFGDKRLLLTALTHRSFCNENNTGTGDFDELEWLGDSVLQLAVSSWLFRTAQGSRRSSGNLSLTRVRFVDAGACESFAKKLKLHPFLRIGHGQPVAG----TKILADCFEAVLGAVYVDAGDCTDLAEIHRILSR-VIPSYEFER 171
            EE LGY F +K+LLLTALTH SF NE        + LE+LGDSVL   V+ +LF+    +    G+L+  R   V   AC  FAK++ L  F+R+ HG+  +G    + ILAD FEAV+ A+Y+DAG    + E  + + R V+P  + +R
Sbjct:    8 EEKLGYHFKNKQLLLTALTHSSFANEAKGKEQSNERLEFLGDSVLGFVVADYLFKN--NTEMPEGDLTKNRAALVCEKACCGFAKQIDLGKFMRLSHGEQNSGGRTRSSILADAFEAVIAAIYMDAG----MEEARKFILRFVLPMLKTQR 152          
BLAST of mRNA_H-paniculata_contig1879.4668.1 vs. uniprot
Match: UPI001A9A005C (ribonuclease III n=1 Tax=Comamonas denitrificans TaxID=117506 RepID=UPI001A9A005C)

HSP 1 Score: 104 bits (259), Expect = 7.010e-22
Identity = 63/144 (43.75%), Postives = 86/144 (59.72%), Query Frame = 0
Query:   24 AVEESLGYRFGDKRLLLTALTHRSFCNENNTGTGDFDELEWLGDSVLQLAVSSWLFRTAQGSRRSSGNLSLTRVRFVDAGACESFAKKLKLHPFLRIGHGQPVAGTK----ILADCFEAVLGAVYVDAGDCTDLAEIHRILSRV 163
            A+++ LGYRF D RLL  ALTHRSF +++N      + LE+LGDSVL LA+SSWL+     S    G+LS  R   V  G+    A  L L   LR+G G+  +G K    ILAD  EA+LGAVY++AG       +H++ ++V
Sbjct:    7 ALQQRLGYRFQDTRLLQRALTHRSFSSDHN------ERLEFLGDSVLGLAISSWLYHKLADS--PEGDLSRARANLVKEGSLYQLALGLGLPELLRLGEGEARSGGKRRPSILADAVEAILGAVYLEAGFPVAEQVVHQLFAKV 142          
BLAST of mRNA_H-paniculata_contig1879.4668.1 vs. uniprot
Match: A0A7V0U1E3_9PROT (Ribonuclease 3 n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7V0U1E3_9PROT)

HSP 1 Score: 104 bits (259), Expect = 9.000e-22
Identity = 67/160 (41.88%), Postives = 92/160 (57.50%), Query Frame = 0
Query:   22 IWAVEESLGYRFGDKRLLLTALTHRSFCNENNTGTG-----DFDELEWLGDSVLQLAVSSWLFRTAQGSRRSSGNLSLTRVRFVDAGACESFAKKLKLHPFLRIGHGQPVAGTK----ILADCFEAVLGAVYVDAGDCTDLAEIHRILSRVIPSYEFERR 172
            I  +E  LGY F    LLL ALTHRS+ NE   G G     D++ LE+LGD+VL+L VS  L+R  QG   S G LS TR R V+A A   FA +L L  FLR+G G+   G +    +LAD FEA+L A+Y+D G+    + + R++   +   E + +
Sbjct:   10 ITGLESILGYVFQRPELLLQALTHRSYLNETR-GEGCIHELDYERLEFLGDAVLELKVSEILYRRFQGE--SEGGLSRTRARIVNAKALAQFADELCLGDFLRLGRGEERQGGRCRPSLLADVFEALLAALYLDGGNAVLESLVQRLVDLSLTETEVDSK 166          
BLAST of mRNA_H-paniculata_contig1879.4668.1 vs. uniprot
Match: A0A7C2EN65_9FIRM (Ribonuclease 3 n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C2EN65_9FIRM)

HSP 1 Score: 103 bits (258), Expect = 1.570e-21
Identity = 61/139 (43.88%), Postives = 85/139 (61.15%), Query Frame = 0
Query:   14 LDEQCIQGIWAVEESLGYRFGDKRLLLTALTHRSFCNENNTGTGDFDELEWLGDSVLQLAVSSWLFRTAQGSRRSSGNLSLTRVRFVDAGACESFAKKLKLHPFLRIGHGQPVAGTK----ILADCFEAVLGAVYVDAG 148
            L+E+  Q + A++++LG RF D+ +L  AL H SF +E   GT  ++ LE+LGD+VL L VS +LFR  Q   RS G L+  R R V   A     ++L+L  +L +G G+   G +    +LAD  EAVLGAVYVDAG
Sbjct:   13 LEERLAQ-LDALQQALGVRFRDRGVLEVALRHDSFAHERGAGTEHYERLEFLGDAVLNLVVSDYLFR--QYPERSEGELAKERARLVSEAALAHLGRRLRLGSYLLLGRGEERGGGRERPGLLADAVEAVLGAVYVDAG 148          
BLAST of mRNA_H-paniculata_contig1879.4668.1 vs. uniprot
Match: A0A2A4YKH6_9BACT (Ribonuclease 3 n=1 Tax=Candidatus Aerophobetes bacterium TaxID=2030807 RepID=A0A2A4YKH6_9BACT)

HSP 1 Score: 103 bits (256), Expect = 2.020e-21
Identity = 57/129 (44.19%), Postives = 83/129 (64.34%), Query Frame = 0
Query:   25 VEESLGYRFGDKRLLLTALTHRSFCNENNTGTGDFDE-LEWLGDSVLQLAVSSWLFRTAQGSRRSSGNLSLTRVRFVDAGACESFAKKLKLHPFLRIGHGQPVAGTK----ILADCFEAVLGAVYVDAG 148
            +E+ LGY F DK LL  A THRSF NEN   + + +E LE+LGD++L L VS +L++T   S+   G+LS  R   V+A +C  F + +++  FL +G G+ +   K    ILAD FEAV+GA+Y+D+G
Sbjct:   11 IEKKLGYTFKDKGLLKLAFTHRSFVNENKEISSNHNERLEFLGDAILGLMVSEFLYKTLPESKE--GDLSFLRANLVEASSCYQFLQMIEISEFLLMGKGEMMNQGKGRDTILADLFEAVIGAIYIDSG 137          
BLAST of mRNA_H-paniculata_contig1879.4668.1 vs. uniprot
Match: A0A0U5ETR8_9BACT (Ribonuclease 3 n=1 Tax=Candidatus Protochlamydia naegleriophila TaxID=389348 RepID=A0A0U5ETR8_9BACT)

HSP 1 Score: 101 bits (251), Expect = 1.100e-20
Identity = 57/137 (41.61%), Postives = 80/137 (58.39%), Query Frame = 0
Query:   16 EQCIQGIWAVEESLGYRFGDKRLLLTALTHRSFCNENNTGTGDFDELEWLGDSVLQLAVSSWLFRTAQGSRRSSGNLSLTRVRFVDAGACESFAKKLKLHPFLRIGHGQPVAGTK----ILADCFEAVLGAVYVDAG 148
            EQ IQ   A+E  LGY F D  LL  A  HRSF NEN   T   + LE+LGDSVL + +S +L+R    +    G LS  R R V+A +C ++ + L +  +L +G G+ +   +    ILAD FEA++GA+Y+D G
Sbjct:    5 EQLIQHASAIEAKLGYAFKDHSLLALAFVHRSFINENRDITQHNERLEFLGDSVLGMLISDYLYRHLPST--PEGQLSYLRSRLVEASSCVNYIQALNIGNYLLLGKGERMNDGRGRESILADLFEAIIGAIYLDGG 139          
BLAST of mRNA_H-paniculata_contig1879.4668.1 vs. uniprot
Match: A0A5C8CQS4_9BURK (Ribonuclease 3 n=1 Tax=Alicycliphilus sp. TaxID=1872437 RepID=A0A5C8CQS4_9BURK)

HSP 1 Score: 100 bits (250), Expect = 1.180e-20
Identity = 64/144 (44.44%), Postives = 84/144 (58.33%), Query Frame = 0
Query:   24 AVEESLGYRFGDKRLLLTALTHRSFCNENNTGTGDFDELEWLGDSVLQLAVSSWLFRTAQGSRRSSGNLSLTRVRFVDAGACESFAKKLKLHPFLRIGHGQPVAGTK----ILADCFEAVLGAVYVDAGDCTDLAEIHRILSRV 163
            A++  L +RF D  LL  A+THRS+ +E+N      + LE+LGDSVL LAVSS LFR  QG     G LS  R   V   +    A +L+L   LR+G G+  +G K    ILAD  EA++GAVY+DAG     A +HR+L  V
Sbjct:    8 ALQHRLQHRFSDPSLLQRAVTHRSYSSEHN------ERLEFLGDSVLNLAVSSLLFRRMQGL--PEGELSRVRALLVKQDSLHRIAMRLQLPQVLRLGEGESKSGGKLRPSILADALEAIIGAVYLDAGYDQAEALVHRLLEGV 143          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1879.4668.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYC8_9PHAE9.030e-13958.51RNase III domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z0E4_9STRA5.080e-3250.98RNase III domain-containing protein n=1 Tax=Tribon... [more]
A0A835ZIJ8_9STRA1.690e-2441.71RNase III domain-containing protein n=1 Tax=Tribon... [more]
UPI0006802D7F2.660e-2241.72ribonuclease III n=3 Tax=Anaeromassilibacillus Tax... [more]
UPI001A9A005C7.010e-2243.75ribonuclease III n=1 Tax=Comamonas denitrificans T... [more]
A0A7V0U1E3_9PROT9.000e-2241.88Ribonuclease 3 n=1 Tax=Proteobacteria bacterium Ta... [more]
A0A7C2EN65_9FIRM1.570e-2143.88Ribonuclease 3 n=1 Tax=Firmicutes bacterium TaxID=... [more]
A0A2A4YKH6_9BACT2.020e-2144.19Ribonuclease 3 n=1 Tax=Candidatus Aerophobetes bac... [more]
A0A0U5ETR8_9BACT1.100e-2041.61Ribonuclease 3 n=1 Tax=Candidatus Protochlamydia n... [more]
A0A5C8CQS4_9BURK1.180e-2044.44Ribonuclease 3 n=1 Tax=Alicycliphilus sp. TaxID=18... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000999Ribonuclease III domainSMARTSM00535riboneu5coord: 37..172
e-value: 2.2E-31
score: 120.2
IPR000999Ribonuclease III domainPFAMPF14622Ribonucleas_3_3coord: 35..149
e-value: 5.8E-20
score: 71.7
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 22..148
score: 28.375
IPR036389Ribonuclease III, endonuclease domain superfamilyGENE3D1.10.1520.10coord: 22..164
e-value: 2.7E-32
score: 113.4
IPR036389Ribonuclease III, endonuclease domain superfamilySUPERFAMILY69065RNase III domain-likecoord: 22..159
NoneNo IPR availablePANTHERPTHR11207RIBONUCLEASE IIIcoord: 24..165
NoneNo IPR availablePANTHERPTHR11207:SF0RIBONUCLEASE 3coord: 24..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1879contigH-paniculata_contig1879:5223..11953 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1879.4668.1mRNA_H-paniculata_contig1879.4668.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1879 4959..13085 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1879.4668.1 ID=prot_H-paniculata_contig1879.4668.1|Name=mRNA_H-paniculata_contig1879.4668.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=506bp
MASSVVDVGNGLILDEQCIQGIWAVEESLGYRFGDKRLLLTALTHRSFCN
ENNTGTGDFDELEWLGDSVLQLAVSSWLFRTAQGSRRSSGNLSLTRVRFV
DAGACESFAKKLKLHPFLRIGHGQPVAGTKILADCFEAVLGAVYVDAGDC
TDLAEIHRILSRVIPSYEFERRPHPTRPQSLHSQPAPQHPPSRHPISSGH
FPLPSPPPHAVAQEQRKVRGEEPRKIMNLAHRVIQIAKNSNGEEAGVRGT
EHQGASAHLPSNGVQPDRHEVLRELDGRLRDFQQIILRGGALSYSTAACA
EAFGEEVAWFYARTATTPRQCVLLDSVLAEESMLKKEFSEAPPGAELVVM
EVVIVPAELRLQCFTVVEYLLVNILRQDVPSHQQAVRLFKSTPHGIETLK
LLEIIINESASSLLFTTRQRSVISARLAGESAELSGGSAAQVTHAAGGQF
PPNFAAPPGHMHRPGEGSGRKQSSSQPHPDMGMRNGGRRGGSRGRGRGRG
RWRGR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000999RNase_III_dom
IPR036389RNase_III_sf