prot_H-paniculata_contig1879.4667.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1879.4667.1
Unique Nameprot_H-paniculata_contig1879.4667.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length148
Homology
BLAST of mRNA_H-paniculata_contig1879.4667.1 vs. uniprot
Match: D8LTG6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTG6_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 1.700e-85
Identity = 130/147 (88.44%), Postives = 135/147 (91.84%), Query Frame = 0
Query:    1 MGGIQPLNKVNVVKKRTKKFARHQSDRFMRIKNSSWRKPKGIDGRVRRRFKGSLPMPNIGYGSDKRTRNILPNGFYKFLVHNVKELELLLMHNRQDLEQNPRIHSSYAAEIAHNVSSRKRKDIVERAGQLHIRVTNAGAKLSAEEDA 147
            MGG+QPLNKVNVVKKRTKKFARHQ+DRFMRIKNSSWRKPKGIDGRVRRRFKG LPMPN+GYGSDKRTRNILPNGFYKFLVHNVKELELLLMHNR+           YAAEIAHNVSSRKRK+IVERAGQLHIRVTNAGAKLSAEEDA
Sbjct:    1 MGGVQPLNKVNVVKKRTKKFARHQTDRFMRIKNSSWRKPKGIDGRVRRRFKGCLPMPNVGYGSDKRTRNILPNGFYKFLVHNVKELELLLMHNRK-----------YAAEIAHNVSSRKRKEIVERAGQLHIRVTNAGAKLSAEEDA 136          
BLAST of mRNA_H-paniculata_contig1879.4667.1 vs. uniprot
Match: A0A835YGQ7_9STRA (Ribosomal protein L32e n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGQ7_9STRA)

HSP 1 Score: 212 bits (539), Expect = 2.000e-68
Identity = 107/147 (72.79%), Postives = 125/147 (85.03%), Query Frame = 0
Query:    1 MGGIQPLNKVNVVKKRTKKFARHQSDRFMRIKNSSWRKPKGIDGRVRRRFKGSLPMPNIGYGSDKRTRNILPNGFYKFLVHNVKELELLLMHNRQDLEQNPRIHSSYAAEIAHNVSSRKRKDIVERAGQLHIRVTNAGAKLSAEEDA 147
            M   +PL K  VVKKRTKKFARHQS+RF+RI+NSSWR+PKGIDGRVRR+FKG++PMPNIGYGS+K+TRN+LPNGFYKFLVHNVK+LELL+MHNR+           YAAEIAHNVS+RKRK+IVERA QL I+VTNA A+L  EEDA
Sbjct:    1 MAAPKPLPKPAVVKKRTKKFARHQSNRFIRIENSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSNKKTRNVLPNGFYKFLVHNVKDLELLMMHNRK-----------YAAEIAHNVSARKRKEIVERASQLFIKVTNANARLRTEEDA 136          
BLAST of mRNA_H-paniculata_contig1879.4667.1 vs. uniprot
Match: A0A6S9KJY2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KJY2_HETAK)

HSP 1 Score: 199 bits (507), Expect = 1.500e-63
Identity = 103/146 (70.55%), Postives = 118/146 (80.82%), Query Frame = 0
Query:    1 MGGIQPLNKVNVVKKRTKKFARHQSDRFMRIKNSSWRKPKGIDGRVRRRFKGSLPMPNIGYGSDKRTRNILPNGFYKFLVHNVKELELLLMHNRQDLEQNPRIHSSYAAEIAHNVSSRKRKDIVERAGQLHIRVTNAGAKLSAEED 146
            M  I PL+K  +VKKRTKKFARHQSD+FMRI  SSWRKPKGID RVRRRFKG++PMP IGYGS+K+TRN+LPNGF KFLV+NV ELELL+MHNR+           Y AEIAHNVS++KRKDIV RA QL IRVTNA A+L A+ED
Sbjct:    1 MAKITPLSKPKIVKKRTKKFARHQSDQFMRIGKSSWRKPKGIDSRVRRRFKGTIPMPKIGYGSNKKTRNVLPNGFLKFLVNNVAELELLMMHNRK-----------YCAEIAHNVSAKKRKDIVTRAEQLGIRVTNANARLEAQED 135          
BLAST of mRNA_H-paniculata_contig1879.4667.1 vs. uniprot
Match: A0A1E7FQF0_9STRA (Ribosomal protein L32e n=3 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FQF0_9STRA)

HSP 1 Score: 197 bits (501), Expect = 1.230e-62
Identity = 102/147 (69.39%), Postives = 119/147 (80.95%), Query Frame = 0
Query:    1 MGGIQPLNKVNVVKKRTKKFARHQSDRFMRIKNSSWRKPKGIDGRVRRRFKGSLPMPNIGYGSDKRTRNILPNGFYKFLVHNVKELELLLMHNRQDLEQNPRIHSSYAAEIAHNVSSRKRKDIVERAGQLHIRVTNAGAKLSAEEDA 147
            M G  P+NK  +VKKRTKKFARHQSD+FMRI++SSWRKPKGIDGRVRRRFKG++PMP+IGYGSDK TRNI PNGF   +V+NV ELE+L+MHNR           +YAA +AH+VSSR RK+IV+RA QL IRVTNA AKL AEEDA
Sbjct:    1 MAGPTPINKKTIVKKRTKKFARHQSDQFMRIRDSSWRKPKGIDGRVRRRFKGAVPMPSIGYGSDKATRNICPNGFKSVVVNNVSELEMLMMHNR-----------TYAATVAHSVSSRIRKEIVQRAEQLAIRVTNAAAKLRAEEDA 136          
BLAST of mRNA_H-paniculata_contig1879.4667.1 vs. uniprot
Match: B7G3G9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G3G9_PHATC)

HSP 1 Score: 195 bits (495), Expect = 1.010e-61
Identity = 101/147 (68.71%), Postives = 118/147 (80.27%), Query Frame = 0
Query:    1 MGGIQPLNKVNVVKKRTKKFARHQSDRFMRIKNSSWRKPKGIDGRVRRRFKGSLPMPNIGYGSDKRTRNILPNGFYKFLVHNVKELELLLMHNRQDLEQNPRIHSSYAAEIAHNVSSRKRKDIVERAGQLHIRVTNAGAKLSAEEDA 147
            M G  PLNK  +VKKRTKKFARHQSD F+RI NSSWRKPKGIDGRVRRRFKGS+PMP+IGYGSDK+TRN+ P+GF   +++NV ELE+L+MHNR           +YAA +AH+VSSR R++IVERA QL IRVTNA AKL AEEDA
Sbjct:    1 MAGPTPLNKKTIVKKRTKKFARHQSDLFLRIANSSWRKPKGIDGRVRRRFKGSIPMPSIGYGSDKQTRNVHPHGFKTVVINNVSELEMLMMHNR-----------TYAATVAHSVSSRIRREIVERAEQLAIRVTNANAKLRAEEDA 136          
BLAST of mRNA_H-paniculata_contig1879.4667.1 vs. uniprot
Match: A0A7S1ZQR6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZQR6_TRICV)

HSP 1 Score: 193 bits (490), Expect = 5.810e-61
Identity = 100/147 (68.03%), Postives = 116/147 (78.91%), Query Frame = 0
Query:    1 MGGIQPLNKVNVVKKRTKKFARHQSDRFMRIKNSSWRKPKGIDGRVRRRFKGSLPMPNIGYGSDKRTRNILPNGFYKFLVHNVKELELLLMHNRQDLEQNPRIHSSYAAEIAHNVSSRKRKDIVERAGQLHIRVTNAGAKLSAEEDA 147
            M G  PLNK  VVKKRTKKFARHQSD F+RI++SSWRKPKGIDGRVRRRFKG+LPMP++GYGSDK+TRNI PNGF   ++ NV ELE+L+MHNR           +YAA +AH+VSSR R+ IVERAGQL IRV+NA AKL  EE A
Sbjct:    1 MAGPTPLNKKTVVKKRTKKFARHQSDLFIRIRDSSWRKPKGIDGRVRRRFKGALPMPSVGYGSDKKTRNIHPNGFKSVVISNVSELEMLMMHNR-----------TYAATVAHSVSSRARRQIVERAGQLGIRVSNAAAKLREEESA 136          
BLAST of mRNA_H-paniculata_contig1879.4667.1 vs. uniprot
Match: K0SD22_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SD22_THAOC)

HSP 1 Score: 195 bits (496), Expect = 1.080e-60
Identity = 102/147 (69.39%), Postives = 118/147 (80.27%), Query Frame = 0
Query:    1 MGGIQPLNKVNVVKKRTKKFARHQSDRFMRIKNSSWRKPKGIDGRVRRRFKGSLPMPNIGYGSDKRTRNILPNGFYKFLVHNVKELELLLMHNRQDLEQNPRIHSSYAAEIAHNVSSRKRKDIVERAGQLHIRVTNAGAKLSAEEDA 147
            M G+QPL+K   VKKRTKKFARHQSD F+RI+NSSWRKPKGIDGRVRRRFKG+LPMP+IGYGS+K+TRN+LP GF   +V NV ELE+L+MHNR           +YAA +AH+VSSR R+ IVERA QL IRVTNA AKL AEEDA
Sbjct:   86 MAGVQPLSKKTCVKKRTKKFARHQSDLFVRIRNSSWRKPKGIDGRVRRRFKGALPMPSIGYGSNKKTRNVLPCGFKSVVVANVSELEMLMMHNR-----------TYAATVAHSVSSRVRRQIVERAEQLAIRVTNAAAKLRAEEDA 221          
BLAST of mRNA_H-paniculata_contig1879.4667.1 vs. uniprot
Match: A0A7S2R0A8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0A8_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.170e-60
Identity = 99/147 (67.35%), Postives = 117/147 (79.59%), Query Frame = 0
Query:    1 MGGIQPLNKVNVVKKRTKKFARHQSDRFMRIKNSSWRKPKGIDGRVRRRFKGSLPMPNIGYGSDKRTRNILPNGFYKFLVHNVKELELLLMHNRQDLEQNPRIHSSYAAEIAHNVSSRKRKDIVERAGQLHIRVTNAGAKLSAEEDA 147
            M G+ PLNK  +VKKRTKKFARHQSD F+RI++SSWRKPKGIDGRVRRRFKG++PMP+IGYGSDK+TRN+ PNGF   +V NV +LE+L+MHNR           +Y A IAH+VSS+ R+ IVERA QL IRV NAGAKL AEEDA
Sbjct:    1 MTGVAPLNKKTIVKKRTKKFARHQSDLFIRIRDSSWRKPKGIDGRVRRRFKGAVPMPSIGYGSDKKTRNVCPNGFKLVVVANVSDLEMLMMHNR-----------TYCATIAHSVSSKVRRAIVERAAQLAIRVNNAGAKLRAEEDA 136          
BLAST of mRNA_H-paniculata_contig1879.4667.1 vs. uniprot
Match: A0A7R9TFE5_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TFE5_9VIRI)

HSP 1 Score: 192 bits (488), Expect = 1.170e-60
Identity = 100/147 (68.03%), Postives = 116/147 (78.91%), Query Frame = 0
Query:    1 MGGIQPLNKVNVVKKRTKKFARHQSDRFMRIKNSSWRKPKGIDGRVRRRFKGSLPMPNIGYGSDKRTRNILPNGFYKFLVHNVKELELLLMHNRQDLEQNPRIHSSYAAEIAHNVSSRKRKDIVERAGQLHIRVTNAGAKLSAEEDA 147
            M G+QPL K  +VKKRTKKFARHQSD FMRI+ SSWRKPKGIDGRVRRRFKG+LPMP+IGYGSDK+TRN LP GF   +V NV +LE+L+MHNR           +YAA +AH+VSSR R++I+ERA QL IRVTNA AKL  EEDA
Sbjct:    1 MAGVQPLMKKTIVKKRTKKFARHQSDLFMRIQRSSWRKPKGIDGRVRRRFKGALPMPSIGYGSDKKTRNTLPCGFKSVVVSNVSDLEMLMMHNR-----------TYAATVAHSVSSRGRREIIERAEQLAIRVTNAAAKLRDEEDA 136          
BLAST of mRNA_H-paniculata_contig1879.4667.1 vs. uniprot
Match: A0A7R9ZQG9_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZQG9_9STRA)

HSP 1 Score: 191 bits (485), Expect = 3.250e-60
Identity = 98/144 (68.06%), Postives = 118/144 (81.94%), Query Frame = 0
Query:    4 IQPLNKVNVVKKRTKKFARHQSDRFMRIKNSSWRKPKGIDGRVRRRFKGSLPMPNIGYGSDKRTRNILPNGFYKFLVHNVKELELLLMHNRQDLEQNPRIHSSYAAEIAHNVSSRKRKDIVERAGQLHIRVTNAGAKLSAEEDA 147
            + P+NK  +VKKRTKKFARHQSD F+RI++SSWRKPKGIDGRVRRRFKG++PMP+IGYGSDK+TRNI P+GF   +V+NV ELE+L+MHNR           +YAA IAH+VSSR RK+IV+RA QL +RVTNA AKL AEEDA
Sbjct:    3 VAPINKKTIVKKRTKKFARHQSDLFIRIRDSSWRKPKGIDGRVRRRFKGAVPMPSIGYGSDKQTRNIHPHGFKTVVVNNVAELEMLMMHNR-----------TYAATIAHSVSSRSRKEIVQRAEQLAVRVTNANAKLRAEEDA 135          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1879.4667.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTG6_ECTSI1.700e-8588.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YGQ7_9STRA2.000e-6872.79Ribosomal protein L32e n=1 Tax=Tribonema minus Tax... [more]
A0A6S9KJY2_HETAK1.500e-6370.55Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1E7FQF0_9STRA1.230e-6269.39Ribosomal protein L32e n=3 Tax=Bacillariaceae TaxI... [more]
B7G3G9_PHATC1.010e-6168.71Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1ZQR6_TRICV5.810e-6168.03Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
K0SD22_THAOC1.080e-6069.39Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2R0A8_9STRA1.170e-6067.35Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7R9TFE5_9VIRI1.170e-6068.03Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A7R9ZQG9_9STRA3.250e-6068.06Hypothetical protein n=1 Tax=Craspedostauros austr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001515Ribosomal protein L32eSMARTSM01393Ribosomal_L32e_2coord: 17..136
e-value: 2.9E-67
score: 239.4
IPR001515Ribosomal protein L32ePFAMPF01655Ribosomal_L32ecoord: 17..136
e-value: 6.4E-46
score: 155.2
IPR001515Ribosomal protein L32ePANTHERPTHR2341360S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT Ncoord: 5..146
IPR018263Ribosomal protein L32e, conserved sitePROSITEPS00580RIBOSOMAL_L32Ecoord: 20..41
NoneNo IPR availablePRODOMPD003823coord: 16..136
e-value: 5.0E-40
score: 409.0
IPR036351Ribosomal protein L32e superfamilySUPERFAMILY52042Ribosomal protein L32ecoord: 4..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1879contigH-paniculata_contig1879:1892..4805 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1879.4667.1mRNA_H-paniculata_contig1879.4667.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1879 1892..4805 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1879.4667.1 ID=prot_H-paniculata_contig1879.4667.1|Name=mRNA_H-paniculata_contig1879.4667.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp
MGGIQPLNKVNVVKKRTKKFARHQSDRFMRIKNSSWRKPKGIDGRVRRRF
KGSLPMPNIGYGSDKRTRNILPNGFYKFLVHNVKELELLLMHNRQDLEQN
PRIHSSYAAEIAHNVSSRKRKDIVERAGQLHIRVTNAGAKLSAEEDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001515Ribosomal_L32e
IPR018263Ribosomal_L32e_CS
IPR036351Ribosomal_L32e_sf