mRNA_H-paniculata_contig1878.4664.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1878.4664.1
Unique NamemRNA_H-paniculata_contig1878.4664.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1878.4664.1 vs. uniprot
Match: D8LLA7_ECTSI (RNA polymerase sigma factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLA7_ECTSI)

HSP 1 Score: 318 bits (815), Expect = 2.930e-98
Identity = 191/330 (57.88%), Postives = 234/330 (70.91%), Query Frame = 3 
Query:  165 MTVEEEIVMAHEVRTLSAYLWSREFLEERLG-RRATRKEWAASLGISEEELSRQVEVSHRAQERIVESNVGLVVMMARRHHPKIFADLGVTRDDIIQEGSMALLRAAETFDPNMGCRFATYAGWWVRDGVQRCVSRQARLIRLPQHVHNFIRTATKSDVELREELGREPTVHELAKYMGVDVSRVRLYSNVPDALSMEAAPG-----VRRSPGAGSXXXXXXXXXD----------------SSADAGYRHETVACGGITPEQRAEMFLFQSKLEELMSVLSPDERLVVSLRYGLDGAQPTTLTELAEMAGASKYRVQRVESRALNKLRR 1088
            MT+ EEI++  EV+ L+ YL +RE LE  LG R  TR+EWAASL IS EEL+ Q+  S RAQERIV +NVGL+V+MARRHHP   A  G    D+IQEGS+A+LRAAETFDP +G RF+TYAGWWVRD V RCV++QAR+IRLPQ+VHNF RTA+ ++  L +ELGR PT  E+A+ M VDV RV    N PDA S++ AP      VR   G    XXXXXXXX                 ++  AGYRHE VAC  + PEQRAE+ LF+SKL++L+SVLS DERLVV LRYGL GA PTT  E+A  AG++K+RV+ VE+RALNKLRR
Sbjct:  180 MTIAEEILLVEEVKILARYLKTREQLEAELGGREPTREEWAASLNISTEELAHQMVASARAQERIVGANVGLIVVMARRHHPATMAR-GTITSDVIQEGSLAVLRAAETFDPRLGYRFSTYAGWWVRDRVTRCVTQQARIIRLPQYVHNFRRTASMTEAALLKELGRRPTYDEIAERMRVDVERVTRLMNCPDAFSLDDAPPPSARIVRDRIGLSGGXXXXXXXXXXXXXXXXXXXXXXXXKAAPGAGYRHERVACSMVNPEQRAEVGLFESKLDKLLSVLSEDERLVVKLRYGLGGASPTTWGEVAARAGSTKHRVRMVETRALNKLRR 508
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BLAST of mRNA_H-paniculata_contig1878.4664.1 vs. uniprot
Match: A0A6H5KNQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ9_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 3.620e-65
Identity = 123/201 (61.19%), Postives = 152/201 (75.62%), Query Frame = 3 
Query:  165 MTVEEEIVMAHEVRTLSAYLWSREFLEERLG-RRATRKEWAASLGISEEELSRQVEVSHRAQERIVESNVGLVVMMARRHHPKIFADLGVTRDDIIQEGSMALLRAAETFDPNMGCRFATYAGWWVRDGVQRCVSRQARLIRLPQHVHNFIRTATKSDVELREELGREPTVHELAKYMGVDVSRVRLYSNVPDALSMEAAP 764
            MT+ EEI++  EV+ L+ YL +RE LE  LG R  TR+EWAASL IS EEL+ Q+  S RAQERIVE+NVGL+V+MARRHHP   A  G    D+IQEGS+A+LRAAETFDP +G RF+TYAGWWVRD V RCV++QAR+IRLPQ+VHNF RTA+ ++  L +ELGR PT  E+A+ M VDV RV    N PDA S++ AP
Sbjct:  178 MTMAEEILLVEEVKLLARYLKTREQLEAELGGREPTREEWAASLNISTEELAHQMMASARAQERIVEANVGLIVVMARRHHPATMAR-GTITSDVIQEGSLAVLRAAETFDPRLGYRFSTYAGWWVRDRVTRCVTQQARIIRLPQYVHNFRRTASMTEAALLKELGRRPTYDEIAERMEVDVERVTRLMNCPDAFSLDDAP 377
[Close]
BLAST of mRNA_H-paniculata_contig1878.4664.1 vs. uniprot
Match: A0A7S2WX55_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WX55_9STRA)

HSP 1 Score: 187 bits (475), Expect = 2.900e-49
Identity = 119/359 (33.15%), Postives = 196/359 (54.60%), Query Frame = 3 
Query:   42 RATSR---LLGKEFEGFTGVSYGK--VSRSSRQQRPRLPSTSERRGMTVEEEIVMAHEVRTLSAYLWSREFLEERLGRRATRKEWAASLGISEEELSRQVEVSHRAQERIVESNVGLVVMMARRHHPKIFADLGVTRDDIIQEGSMALLRAAETFDPNMGCRFATYAGWWVRDGVQRCVSRQARLIRLPQHVHNFIRTATKSDVELREELGREPTVHELAKYMGVDVSRVRLYSNVP-DALSMEAAPGVRRSPGAGSXXXXXXXXXDSSADAGYRHETVACGGITPEQRAEMFLFQSKLEELMSVLSPDERLVVSLRYGLDGAQPTTLTELAEMAGASKYRVQRVESRALNKLRRPARS 1100
            RAT R   L  KE EG    S        SS +      S  +   +  EEE+++A +V+ +  +   R+ L+++LGR  T +EWA+S+G+  +EL R++     A++ ++ SN+ LV+ +A+R+  +     G+   D+IQEGS+ L+RA E FDP  G +F+TY+ WW++  + R ++ Q+R IRLP H+H+ + T  K   EL   LGR PT  ELA+ M + + ++R        A+SM+A         + +         DS  D           G  P Q  E  + +  +E+L+  LSP E+ V+ +R+GLD  +P TL E+  +   ++ RV+++E+RAL+KLR+P R+
Sbjct:  127 RATGRTVALKDKEGEGMPSPSTAASAAGSSSNELGWFFKSIGQHSLLRAEEEVLLARKVQAMIGWEDVRDGLKDQLGRPPTLEEWASSVGMQPDELRRKLLRGQSAKKAMISSNLRLVISIAKRYQKR-----GLALTDLIQEGSLGLVRAVEKFDPEKGFKFSTYSTWWIKQAILRAIADQSRTIRLPVHIHDLLNTMKKQTRELHVSLGRNPTNEELAERMNLPIEKLRFLQECSRPAVSMDAQRRAMTKKSSSAGKGGEVQLGDSIKD----------DGPCPTQVTEANMLKEDIEKLVCTLSPREQDVIRMRFGLDADKPKTLEEIGNVFSVTRERVRQIEARALHKLRQPYRN 470
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BLAST of mRNA_H-paniculata_contig1878.4664.1 vs. uniprot
Match: A0A7S1B782_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B782_9STRA)

HSP 1 Score: 181 bits (458), Expect = 8.140e-47
Identity = 116/313 (37.06%), Postives = 192/313 (61.34%), Query Frame = 3 
Query:  165 MTVEEEIVMAHEVRTLSAYLWSREFLEERLGRRATRKEWAASLGISEEELSRQVEVSHRAQERIVESNVGLVVMMARRHHPKIFADLGVTRDDIIQEGSMALLRAAETFDPNMGCRFATYAGWWVRDGVQRCVSRQARLIRLPQHVHNFIRTATKSDVELREELGREPTVHELAKYMGVDVSRVR-LYSNVPDALSMEAAPGVRRSPGAGSXXXXXXXXXDSSADAGYRHETVACGGITPEQRAEMFLFQSKLEELMSVLSPDERLVVSLRYGLDGAQPTTLTELAEMAGASKYRVQRVESRALNKLRRPARS 1100
            +T +EE+++A  V+ L  +   RE LE  L R  T  EWAA++G+  ++L RQ+  S RA+  ++ESN+ LV+ +A+R+  +      ++  D+ QEGS+ L++A E FDP  G RF+TYA WW++  V R ++ Q+R IRLP H+H+ + T  K   EL  +LGR+PT  E+A+  G+ V +++ L+ +  + +S E      R  GAG XXXXXXXX    +D+    E +      PE++A + L +  ++ L+  LS  E+ V+ +R+GLD  +  TL E+ +    ++ R++++E+RAL+KLR+P R+
Sbjct:  187 LTAQEEVLLARHVQLLLKWEEVRERLEIELARPPTYAEWAAAVGVDTKKLKRQIRRSQRAKAAMIESNLRLVISIAKRYTSRTNT---LSVQDLCQEGSLGLVKAVEKFDPERGFRFSTYATWWIKQSVMRAIADQSRTIRLPVHIHDQLNTVRKHKRELTGKLGRQPTTEEIAEAAGITVDKLQFLWKSSRETMSFEQE---IRVGGAGXXXXXXXXXTVILSDSITDKEHM------PEEKAALSLMKDDIDRLLGTLSVREQDVIRMRFGLDDGKAKTLEEIGKRFRVTRERIRQIEARALHKLRQPYRN 487
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BLAST of mRNA_H-paniculata_contig1878.4664.1 vs. uniprot
Match: A0A3M2FSV9_9CYAN (RNA polymerase sigma factor, RpoD/SigA family n=9 Tax=Cyanobacteria TaxID=1117 RepID=A0A3M2FSV9_9CYAN)

HSP 1 Score: 175 bits (444), Expect = 1.200e-46
Identity = 112/319 (35.11%), Postives = 175/319 (54.86%), Query Frame = 3 
Query:  165 MTVEEEIVMAHEVRTLSAYLWSREFLEERLGRRATRKEWAASLGISEEELSRQVEVSHRAQERIVESNVGLVVMMARRHHPKIFADLGVTRDDIIQEGSMALLRAAETFDPNMGCRFATYAGWWVRDGVQRCVSRQARLIRLPQHVHNFIRTATKSDVELREELGREPTVHELAKYMGVDVSRVRLY-SNVPDALSMEAAPGVRRSPGAGSXXXXXXXXXDSSADAGYRHETVACGGITPEQRAEMFLFQSKLEELMSVLSPDERLVVSLRYGLDGAQPTTLTELAEMAGASKYRVQRVESRALNKLRRPARSSGHEHL 1118
            +T E+E++   +V+ L+A    RE L   L R  TR EWAA+  ISE EL   +E   RA+ ++VE+N+ LVV +A+++  +      V   D+IQEG++ + R  E FDP  G RF+TYA WW+R  + R ++ + R IRLP H+   +    K+  +L + LGR  T++ELA  + +  ++VR Y       LS++   G  +    G                    E +    I+PE+ A     +S LE LM+ L+P +R V+SLR+GL+  QP TL ++ E+   S+ RV+++E  AL+KLR+  R   HE+L
Sbjct:   21 LTHEQEVIYGKQVQQLTAMNEIREKLAAELNREPTRAEWAAAANISEAELETIIENGERAKRKMVEANLRLVVSVAKKYIKR-----NVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKAQRQLSQRLGRAATINELAAELELTPAQVREYLERARQPLSLDVRVGDNQDTELG--------------------ELLEDSSISPEEFATQSSLRSDLERLMADLTPQQRHVLSLRFGLENGQPLTLAKVGELLNISRERVRQIEREALSKLRK-RRGDIHEYL 313
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BLAST of mRNA_H-paniculata_contig1878.4664.1 vs. uniprot
Match: A0A2V3IIW3_9FLOR (RNA polymerase sigma factor SigA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIW3_9FLOR)

HSP 1 Score: 176 bits (445), Expect = 2.810e-46
Identity = 123/381 (32.28%), Postives = 194/381 (50.92%), Query Frame = 3 
Query:   21 RGRLAVRRATSRLLGKEFEGFTGVSYGKVSRSSRQQRPRLPSTSER------------RGMTVEEEIVMAHEVRTLSAYLWSREFLEERLGRRATRKEWAASLGISEEELSRQVEVSHRAQERIVESNVGLVVMMARRHHPKIFADLGVTRDDIIQEGSMALLRAAETFDPNMGCRFATYAGWWVRDGVQRCVSRQARLIRLPQHVHNFIRTATKSDVELREELGREPTVHELAKYMGVDVSRVRLYSNVPDALSMEAAPGVRRSPGAGSXXXXXXXXXDSSADAGYRHETVACGGITPEQRAEMFLFQSKLEELMSVLSPDERLVVSLRYGLDGAQPTTLTELAEMAGASKYRVQRVESRALNKLRRPARSSGHEHLLPP 1127
            RGR   RRA S  L  +       S  K S  +++     PS S+             R +T EEE+    +VR L  +  +R  L + +GR  +  EWA  + I  +  + Q+  + +A++R++  N+ LVV +A+R     + + G+   D+IQEG++ L+RA E FD   G +F+TYA WWVR  V R ++ Q+R IRLP H+++ I    ++   L  ELGR P   E+A+Y  + V ++R        ++M+AA                     +S DA    + +     +PE R E  L +  LE +++ L+P ER VV +RYGLD  +  TL E+  +   +K RV+++ES+AL KLR P RS+  +   PP
Sbjct:    8 RGRPRTRRARSEPLSSDS------STTKTSNPAKKPASSSPSVSDNTVRWYLQLIGSDRLLTAEEEVEYGRQVRKLMHWQRNRVELADTIGREPSDSEWADFVDIDRQTFATQLVDARKAKDRMIVCNLRLVVSIAKR-----YLNRGMPLSDLIQEGTLGLIRACEKFDAEKGFKFSTYATWWVRQAVTRAIADQSRTIRLPVHLYDTITAIRRATKYLTNELGRPPLEREIAEYCNITVEKLR-----STRINMQAA-------------MPLDCPLTNSDDALTLSDVIESDEESPEDRVESSLLRDDLEHVVNSLTPRERDVVRMRYGLDDGRAKTLEEIGRVFDVTKERVRQIESKALRKLRHPFRSAVLKAYTPP 359
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BLAST of mRNA_H-paniculata_contig1878.4664.1 vs. uniprot
Match: A0A1Z4RRK4_9CHRO (RNA polymerase sigma factor SigA n=7 Tax=Cyanobacteria TaxID=1117 RepID=A0A1Z4RRK4_9CHRO)

HSP 1 Score: 175 bits (444), Expect = 5.220e-46
Identity = 104/314 (33.12%), Postives = 174/314 (55.41%), Query Frame = 3 
Query:  165 MTVEEEIVMAHEVRTLSAYLWSREFLEERLGRRATRKEWAASLGISEEELSRQVEVSHRAQERIVESNVGLVVMMARRHHPKIFADLGVTRDDIIQEGSMALLRAAETFDPNMGCRFATYAGWWVRDGVQRCVSRQARLIRLPQHVHNFIRTATKSDVELREELGREPTVHELAKYMGVDVSRVRLYSNVPDA-LSMEAAPGVRRSPGAGSXXXXXXXXXDSSADAGYRHETVACGGITPEQRAEMFLFQSKLEELMSVLSPDERLVVSLRYGLDGAQPTTLTELAEMAGASKYRVQRVESRALNKLRRPARSS 1103
            +  EEEI +A ++  L      ++ LE+ LGR AT +EWA  + +   +  R++ +  RA++++V+SN+ LVV +A++     + + G++  D+IQEGS+ L+RAAE FD   G +F+TYA WW+R  + R ++ Q+R IRLP H++  I    K+   L +E GR+PT  E+A  M + + ++R  +      +S+E   G       G                    + +   G TPE +    L +  LE ++  LSP ER V+ LRYGLD  +  TL E+ ++   ++ R++++E++AL KLR P R+S
Sbjct:   78 LRAEEEIELARQIADLLELERLKDSLEDGLGREATEEEWAREVDMEYRKFRRRLFIGRRAKDKMVQSNLRLVVSIAKK-----YMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEQGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLG--------------------DFIEADGETPEDQVSKSLLREDLESVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNS 366
[Close]
BLAST of mRNA_H-paniculata_contig1878.4664.1 vs. uniprot
Match: UPI0019F4056F (RNA polymerase sigma factor RpoD n=1 Tax=filamentous cyanobacterium LEGE 07170 TaxID=1828880 RepID=UPI0019F4056F)

HSP 1 Score: 175 bits (444), Expect = 5.610e-46
Identity = 105/314 (33.44%), Postives = 175/314 (55.73%), Query Frame = 3 
Query:  165 MTVEEEIVMAHEVRTLSAYLWSREFLEERLGRRATRKEWAASLGISEEELSRQVEVSHRAQERIVESNVGLVVMMARRHHPKIFADLGVTRDDIIQEGSMALLRAAETFDPNMGCRFATYAGWWVRDGVQRCVSRQARLIRLPQHVHNFIRTATKSDVELREELGREPTVHELAKYMGVDVSRVRLYSNVPDA-LSMEAAPGVRRSPGAGSXXXXXXXXXDSSADAGYRHETVACGGITPEQRAEMFLFQSKLEELMSVLSPDERLVVSLRYGLDGAQPTTLTELAEMAGASKYRVQRVESRALNKLRRPARSS 1103
            +  +EEI +A ++  L     + E L E+L R  T  EWA ++G+ E    R++ +  RA++++V+SN+ LVV +A++     + + G++  D+IQEGS+ L+RAAE FD   G +F+TYA WW+R  + R ++ Q+R IRLP H++  I    K+   L +E+GR+PT  E+A  M + + ++R  +      +S+E   G       G                    + +   G TPE +    L +  LE ++S LSP ER V+ LRYGLD  +  TL E+ ++   ++ R++++E++AL KLR P R+S
Sbjct:   81 LRADEEIELARKIADLLELEQTGEKLAEKLDREPTYAEWAEAMGMEETAFRRRLFLGRRAKDKMVQSNLRLVVSIAKK-----YMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLG--------------------DFIESDGETPEDQVSKSLLREDLETVLSTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNS 369
[Close]
BLAST of mRNA_H-paniculata_contig1878.4664.1 vs. uniprot
Match: UPI0019DD4219 (RNA polymerase sigma factor RpoD n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI0019DD4219)

HSP 1 Score: 174 bits (442), Expect = 1.010e-45
Identity = 105/314 (33.44%), Postives = 176/314 (56.05%), Query Frame = 3 
Query:  165 MTVEEEIVMAHEVRTLSAYLWSREFLEERLGRRATRKEWAASLGISEEELSRQVEVSHRAQERIVESNVGLVVMMARRHHPKIFADLGVTRDDIIQEGSMALLRAAETFDPNMGCRFATYAGWWVRDGVQRCVSRQARLIRLPQHVHNFIRTATKSDVELREELGREPTVHELAKYMGVDVSRVRLYSNVPDA-LSMEAAPGVRRSPGAGSXXXXXXXXXDSSADAGYRHETVACGGITPEQRAEMFLFQSKLEELMSVLSPDERLVVSLRYGLDGAQPTTLTELAEMAGASKYRVQRVESRALNKLRRPARSS 1103
            +  EEEI +A ++  L      RE LE+RL +  +  EWAA +G++  +  R++ +  RA++++V+SN+ LVV +A++     + + G++  D+IQEGS+ L+RAAE FD   G +F+TYA WW+R  + R ++ Q+R IRLP H++  I    K+   L +E+GR+PT  E+A  M + + ++R  +      +S+E   G       G                    + +   G TPE +    L +  LE ++  LSP ER V+ LRYGLD  +  TL E+ ++   ++ R++++E++AL KLR P R+S
Sbjct:   78 LRAEEEIELARKIADLLELERIRERLEQRLEKIPSDAEWAAEVGMAIPQFRRRLFLGRRAKDKMVQSNLRLVVSIAKK-----YMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLG--------------------DFIEADGETPEDQVSKSLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNS 366
[Close]
BLAST of mRNA_H-paniculata_contig1878.4664.1 vs. uniprot
Match: UPI001A0CF0F9 (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Gloeomargaritaceae cyanobacterium C42_A2020_066 TaxID=2747801 RepID=UPI001A0CF0F9)

HSP 1 Score: 172 bits (437), Expect = 1.310e-45
Identity = 106/309 (34.30%), Postives = 173/309 (55.99%), Query Frame = 3 
Query:  165 MTVEEEIVMAHEVRTLSAYLWSREFLEERLGRRATRKEWAASLGISEEELSRQVEVSHRAQERIVESNVGLVVMMARRHHPKIFADLGVTRDDIIQEGSMALLRAAETFDPNMGCRFATYAGWWVRDGVQRCVSRQARLIRLPQHVHNFIRTATKSDVELREELGREPTVHELAKYMGVDVSRVRLY-SNVPDALSMEAAPGVRRSPGAGSXXXXXXXXXDSSADAGYRHETVACGGITPEQRAEMFLFQSKLEELMSVLSPDERLVVSLRYGLDGAQPTTLTELAEMAGASKYRVQRVESRALNKLRR 1088
            +T EEEI +  +V++LS     R  L E+LGR  +++EWAA+ GIS  +L R V+   RA+ +++E+N+ LVV +A+++  +      V   D+IQEG++ + R  E FDP+ G RF+TYA WW+R  + R ++ ++R IRLP H+   +    K+  +L + LGR  TV ELA  + +   +VR Y       LS++   G  +    G                    E +   G+TPE   +    + +++ +M+ L+P +R V+SLRYGL+  QP TL+ + E+   S+ RV+++E  AL KLR+
Sbjct:   24 LTHEEEIRLGRQVQSLSQLQDQRTSLAEQLGREPSQEEWAAAAGISLWDLQRIVQAGERAKRKMIEANLRLVVAVAKKYVKR-----NVDLLDLIQEGTIGMQRGVEKFDPSKGYRFSTYAYWWIRQAITRAIAEKSRTIRLPIHITEKLNKIKKAQRQLSQSLGRAATVGELAAELDLTPRQVRDYLERARQPLSLDVRVGDNQDTELG--------------------ELLEDQGLTPEDFTDQTALRHEIQGVMAELTPQQRRVLSLRYGLEDGQPLTLSRIGELLNISRERVRQIEREALTKLRK 307
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1878.4664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLA7_ECTSI2.930e-9857.88RNA polymerase sigma factor n=1 Tax=Ectocarpus sil... [more]
A0A6H5KNQ9_9PHAE3.620e-6561.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WX55_9STRA2.900e-4933.15Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1B782_9STRA8.140e-4737.06Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A3M2FSV9_9CYAN1.200e-4635.11RNA polymerase sigma factor, RpoD/SigA family n=9 ... [more]
A0A2V3IIW3_9FLOR2.810e-4632.28RNA polymerase sigma factor SigA n=1 Tax=Gracilari... [more]
A0A1Z4RRK4_9CHRO5.220e-4633.12RNA polymerase sigma factor SigA n=7 Tax=Cyanobact... [more]
UPI0019F4056F5.610e-4633.44RNA polymerase sigma factor RpoD n=1 Tax=filamento... [more]
UPI0019DD42191.010e-4533.44RNA polymerase sigma factor RpoD n=1 Tax=Pleurocap... [more]
UPI001A0CF0F91.310e-4534.30RNA polymerase sigma factor, RpoD/SigA family n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1878contigH-paniculata_contig1878:1487..12493 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score323.9
Seed ortholog evalue1.1e-85
Seed eggNOG ortholog2880.D8LLA7
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.sigma factor activity
EggNOG OGs2QVXR@2759,COG0568@1
Ec32 ortholog descriptionRNA polymerase sigma-70 region 2
Ec32 orthologEc-27_001910.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1694
Cds size1287
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1878.4664.1prot_H-paniculata_contig1878.4664.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1878 1883..12482 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929445.6635766-UTR-H-paniculata_contig1878:1486..18821622929445.6635766-UTR-H-paniculata_contig1878:1486..1882Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1878 1487..1882 -
1691480864.3741727-UTR-H-paniculata_contig1878:1486..18821691480864.3741727-UTR-H-paniculata_contig1878:1486..1882Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1878 1487..1882 -
1622929445.7378826-UTR-H-paniculata_contig1878:12482..124931622929445.7378826-UTR-H-paniculata_contig1878:12482..12493Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1878 12483..12493 -
1691480864.4169714-UTR-H-paniculata_contig1878:12482..124931691480864.4169714-UTR-H-paniculata_contig1878:12482..12493Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1878 12483..12493 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929445.6817834-CDS-H-paniculata_contig1878:1882..25801622929445.6817834-CDS-H-paniculata_contig1878:1882..2580Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1878 1883..2580 -
1691480864.3838992-CDS-H-paniculata_contig1878:1882..25801691480864.3838992-CDS-H-paniculata_contig1878:1882..2580Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1878 1883..2580 -
1622929445.6976085-CDS-H-paniculata_contig1878:4134..44111622929445.6976085-CDS-H-paniculata_contig1878:4134..4411Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1878 4135..4411 -
1691480864.3914602-CDS-H-paniculata_contig1878:4134..44111691480864.3914602-CDS-H-paniculata_contig1878:4134..4411Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1878 4135..4411 -
1622929445.7112393-CDS-H-paniculata_contig1878:5418..56471622929445.7112393-CDS-H-paniculata_contig1878:5418..5647Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1878 5419..5647 -
1691480864.3993814-CDS-H-paniculata_contig1878:5418..56471691480864.3993814-CDS-H-paniculata_contig1878:5418..5647Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1878 5419..5647 -
1622929445.7220445-CDS-H-paniculata_contig1878:12399..124821622929445.7220445-CDS-H-paniculata_contig1878:12399..12482Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1878 12400..12482 -
1691480864.4099157-CDS-H-paniculata_contig1878:12399..124821691480864.4099157-CDS-H-paniculata_contig1878:12399..12482Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1878 12400..12482 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1878.4664.1

>prot_H-paniculata_contig1878.4664.1 ID=prot_H-paniculata_contig1878.4664.1|Name=mRNA_H-paniculata_contig1878.4664.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=429bp
MGLRGRLAVRRATSRLLGKEFEGFTGVSYGKVSRSSRQQRPRLPSTSERR
GMTVEEEIVMAHEVRTLSAYLWSREFLEERLGRRATRKEWAASLGISEEE
LSRQVEVSHRAQERIVESNVGLVVMMARRHHPKIFADLGVTRDDIIQEGS
MALLRAAETFDPNMGCRFATYAGWWVRDGVQRCVSRQARLIRLPQHVHNF
IRTATKSDVELREELGREPTVHELAKYMGVDVSRVRLYSNVPDALSMEAA
PGVRRSPGAGSGGGGGGAGGDSSADAGYRHETVACGGITPEQRAEMFLFQ
SKLEELMSVLSPDERLVVSLRYGLDGAQPTTLTELAEMAGASKYRVQRVE
SRALNKLRRPARSSGHEHLLPPTIVADGDSGGNGDDGKWIGYGVEHGDTS
LLDEYGEQEVAATGQSLAENDQGRERRR*
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mRNA from alignment at H-paniculata_contig1878:1487..12493-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1878.4664.1 ID=mRNA_H-paniculata_contig1878.4664.1|Name=mRNA_H-paniculata_contig1878.4664.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11007bp|location=Sequence derived from alignment at H-paniculata_contig1878:1487..12493- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGGCCGGGGATGGGGTTGAGGGGACGGTTGGCCGTACGGCGAGCGACG
TCGAGGCTACTTGGGAAAGAGTTTGAGGGGTTTACCGGAGTGAGGTGAGC
GGGTCTTGAATGTGTTTCGGGCTTACCTGTTGCTGTGCATGTCTCTTCGT
GTGTGTGTTGTGTGTGTTGTGTTTAGGGAGAGAGGAAGAGAGGGGCGGGC
GGGACTGTTAGACAAGCGCTCTTTACGATGGCCTACTCCGAGGGAGGTTG
TTGATGACTCGAAACTTCTTGACACCAATGGGAAGGGTGTTACGGTTAGA
AGGGGATGAGTGCTGACGTCGGTGTGTGTTATGGTGCTGTCTGCTTATGT
TTTGACGAAAGGTAACCGAGTTGACAGCAAGATACCGCTCCTCTGTTCTA
GACAGCTGTCTGGCTACGATACCATCCCTCTCGACTCATCTATGTACTTA
TATTTCTCCGCATGCATAGGCCAGGGTTTTATGGTGTCGCGCGAGAACAT
GTGATCCACATAAATCATATTGGGCACTCCTGAACTCCAGGAGCCCAGCA
TGAGGAAAGCGCTGAGCTCTAGCTTGGCCGGCGTGGCTCACCCACGAAAA
GAAGCAAGCAAGAAAAAGCGACGAACAAGAACATCTCATCTTCATCGAGT
GATAATGATTGATTTCGTTTTCTCTAAACTTATGTCAAGCAGAAGTACAG
CTATCCATCATGCTGCTGTCTCGCTACAATTCGTGTCGTGGTGGAGTCGC
AGAATTAAGGCGAATGAAGTTCGTACCGGGTACGTTCTGTGTTTTGTCTC
TCTCTCGATGAGAGAGAGTGAAAAAGAGAGTGCAGTGCAGTGCAGACTCA
CGGAAGAAGACAACAGACTCACCTATATTTGCCGTATCCAAGTTTGCTTG
TTGATGAGTGTAGTCTATGCATTTGGTATTATTTGAGTCAGGCTACCTGC
ATAACCTATAAGAGAACAATACACTTTGTAGTGTATCTATATGGTGCCAA
GAAAACGAGGTGAACAGCGGTGAAGAGGGTATTTGTGTCAACTTTTAACT
TGGTGCTAGGTCTTATTATGATTTATACGTACAGTACGCACCCTATAACA
CCCATATAATAATAGCGGTACGGTTACACTCCCCGGTGCATGCAGTATTG
ACGTTCATGTTTATCTTCACATTTTATTTCGTCCACATGCTGCACCGGTG
CTTCCTCGTAGAACGGGGTGACTCGTGCATCACGCAATTCATATTCCGTG
TAGATGTCCTTTGCCCCCCCGTCCTACTGCCTATTCCCATCGTTTTTTGT
CCTATAATTCGACGATGAAGGAGGGGTGTGAGGTACACCAATCTGCGTCT
CTCCTCGACTGAGAGCAACAGTGCCTATAGGGGGGGGGGGGGGGGAAGAA
TGTTATTGTCATTTGGTTTCATCGACGACGTGATTCACGCGCTTAGGTGA
CTAGTACAACCGTGTAGGACTTGTCTAACATGTTGGCTCGCTGCCATCGA
GCTGAACATGGAGATATAATTGGTATGTGTGCGGCACTGCTGCTGGGACC
TGCTGCCTCTCTGATGTAGCAACCGATCCGTCTCCTGAATCATGCTGGGA
AAGGGTGGAAGACGGCCACGTGTTTATCTTCTTCCAACACATTGGTCCAA
TCGCCTAGACCCTCTGTCAAGGGATAGAAAGCGGCTACCCGGATCCGCTG
TGACGATTGTGGGTGTGTGCCGGTAAATAAAGGCCATGCAAAAGCGCGGG
TGAACTATGGTTTCATTCCGACCCGTTTTTTTCAAATAACCATGGCGAGT
ATTGCAAAAGACTCAGAAAGTTATGGGTTTGCCTGTATTTACTTTCTCAT
CCATGGGAGAGATCGTATACCTGCCTTCTCTGAGCCGCACTTCCAATTCT
TGGAGTCTGCACAGGACAAAGTTACAAGCAGTGCAGCAGCCCGATAGCCG
ATTTCCGTTCTGTTACTTGGGATAGTCACGGAGCGGAAATCGGCTATCGG
AATGCTTGACTTTCTTGTTCGTTGTGTTAGGGCGCCTCAAACTGTTGAAG
TGTGGCGTCAGCGGGGACAGGTATATACGCATAGTGAAGAGAGCTCAAAC
CAACCGATGCCCTTTAGCGTCTTTTGGCAGGCGCCATGGTTTTCCGACTA
TGGTGGGGGTCCCTCCCGCAACAAGGTGGTGGTGTGACACTGGTATAAGG
TGGTCGCCGTACTATAGAAAAGCCTATTTAGTCCGGTACCGCACTATTGC
GGCATATATCCTTGTATAGCGCGGTACCGCACTATACAGGGCCTTACGCC
AGTTGTGTTTCTGCAGAATTTATTCCAGGCCGAGACAAGTAGGATCCAAG
GCGAGAATAACACGAAAACAGCTAAGCACATGTCCTGTCCTAAAATAAAC
GTGGTTGTAGCAGAAATTCTGCACTGGTATTTGCGGGCGTGCGGTCTGAA
AGTTTGCACAGTTCTCCTTCCGCACACGGCATGGTGTGTTTCAGCTGCGT
ACCTCTGTGCGAGTGGCTGCCTGCGACTCAGAAAGTTGTCTACGTTGCAG
CTGCAGCTTGATTGGCCACTGCTTCCTGCGTGTTTGACTTCTCAGATCTG
GGGCATGTTGGTCCACAATGATGCGGTCACCGCACTATTGAGGGACATGT
CGCAGTATAAAGCGGTGACCAAACTATTGTGGATCGGAGGTGTGACATGG
GATTTTAAACGTTGTATAATCGGGGCCCGTATTATTGAGTACCGCCTTAT
TACGGAACCACCACAGAACAACGGAGCCTGTACAGAAAGCGGTCCGCTCG
GTGGAGTTATACAGTGCTGACTATCGTGGTCTACTTATAATATTCAGATT
GCTTCCTGTACAGAACCCACGGTTTATGTTGTCTCGCACGAAAAAAGGTG
ACCCACGCGAAAGCCACATTGCATTTCTAAACTCCAGGAGCCGCCAAGAA
TGAACATCGTGCTGACGACTTTTGAATTGACTCGCCAGAAGAAGGAAGGA
AGAAGCAAAACAATAGAACATACACAAGGTTATTGTCGTTCCATATCGAC
ATGTCAATAGTTGCCCCGCATACAGCATTTGGCGGTTACAGAACGAAACC
AACATCAGTGTGCCAACTCAGCAGTGGACCCGAGGATGGATGGCCTATGC
ATGCTAGTTCACAATGCATACCCGGAGATTGGCTGCGCCAGGATATGTCC
TCGAACCGACCATAGGTTTTGCACGGCACGTAGTGCACAGGGTATAACAC
CATACCCCATCCAAGAGTATACCCCCTGCTCCCCCGCGCCCCCCTCCGTG
CGAAAGCCCCGTATTCGATCTAATGTTTCTGATGAATGTACACAAGTTAG
ATCTGAGGTCAGCTACACAATATTAACATGGGTACGATGGAGTTATTACA
CTCCCCTAATTAATTTAATTTTGCTGAGTGATTTCCTCCCCGGATTCCAC
CCCCCGTGATGATGTCCATTAACTTATCCGGGGGTAGGGGGGGGGTGTTA
TCTCCAGTTTGAATGACAGTAGGCTACGAGGCTACCGCGCCACGGGGACA
ATCTCAATCTTCACAGCGTGTTTGCGCAGCCGGCTTCGTCCGCGCTCTTC
CCACCGGGATGAAGGCGCCGGCGCCTCGCGGGAAACGCTAATGCGTCATG
CCATTTGCCATTTTCACGCCCTCATTTCCAATTCCCGCGCTTTTAGATGG
TTTGACAAGCGAGCATTCTTGGCCCAAGTGTGTTTTCCTGGCTACATCCC
CCCCCGCATGAAACGGCTGTCAAATACCCGCGAGTCGGAAACAGTCGTCA
AAAATACCCCGTGGGCGGCTGTAGTCAAGCAGGAAATATTGTGCTGTTTT
TTTTTTGTGAGTCCTTTTATTCACTGCTATTATATATATATATATAATAG
TCACCCTTGCTTCTATTTGTGTTGTGGTGAAACGGTGGCCAAAAGTGGTT
TGGCAAGTCCGTTGTTCATCACCGCCCACCTTCCACAAAGTCTTCGATCT
GTTCAGAATTATGTAGACTAGTAAACGAAGAAGAATTGTGCAATATACAC
CTTAGGTTAGTATAATATTTTGGAATCTGGTGTGCTGTGTGTACGTTCTA
CGCTGTATGTGTATGTGGCATCTGTTGCCTCTTCTTATCGTGTGCGGACC
TTCGCACGGCCGACGCCTCTACTATCCCGTGAAGATGAGCATGCATATTA
TGTGCTTGTGTTGGTTGACTGACCTGGCCGACGCCTTCACCCGTGCAGAG
CAGTACTTATTTCATTTGCACATGTGGGTCAACGGGAGCACGCGCTGATT
CTCTGTCTGCTAAGTCGAGAGGCGGTGTAGTTTAGTCATAGTCGCTGTTG
AGACGCGAGATAGTCGGTACCACTAATGACATAACGCGGCGCTCGCGCCG
GCCGGTCACGAGTATTTTAACTCTGTTTTTCGGGAAGTGATTTGAATGCA
GCGTGAGTGGGAGATGTGCCTCTAGTTGCGAAATAATTGAATGAGAAGAA
GTGTGTTGTTGTGCGTGGACTATTTATATTTGTTCCTGCAAAGGATTATG
TTTGACAGACCCAATGACTGTCCCAGGTAGAGCTGATACAATGCTCTATT
CGAATCTCGAGCAACTATCTCGGCATATTTCACGACTAGTGCGTGAAAAA
CAGACTCTTGAGCTGCGCAATGAATACTGTGACGGAAAGCACGGTTTCTC
TGTGTTCCTGGTTCATCCTCCACAAAACCAACGTACGTAACGGACTTTGC
CCTCGACACAACCATGCTACAACAGCCGTGCATGTTTCGGGTATTGTAGC
ACTTGACGAGGTGGAGTAATGTCAGACGCTCTCACGTGGTTAGTCGCCCG
CCCACGCGGAGAAGCAGGGTGCCCGAACCTTCACCGGCTAGGGAAGGAGC
CGCGACAATGCCATTCAGCACAATCATTCGCCGTACTTGTTGCCGGCTTG
CCCAAACCGAAGTCCGGCATTATTGAATTCCGTTGAGCAAGGCCATGATG
GCTAACGAGGACGATTGCGCTGAAAGCTACTATTGCGGCTCCTTTCGTCG
ACAGCGAAGACTCGGCGTCCCTGCTTCGCCTCGGTGGCGGGCGACTGACT
GCTCGGGAACGTCTGATATTGGTTGCTTTATTTTGTTCAAGTGCTACAAC
CCCCCGAAACGTGTGCATGGCTTGTTCAGTACCCACGGGTCAAACTATTC
TGGGGACATTCTTTGTTGTTTTTCTGATTTTTCGGGCATCGCAAGTTATC
AGGGTCGACCTTTCCCAAAATATGGGGATCGATAGGTATTAGTGTGCTTC
ACGTGATGCGTTTTTTTTTGTTACCACGATGAAGTTTGAACGAGTTTCAG
GCTTACCGGTCGTCGGGGGTCCTAACCTATCTCCTACCCAGATTTTGTCT
CTTCATTTTTCTTTTTGGTCAAACCTATCCCTAAATCTCTGGTGGAGAGG
ATGACAGCTTCAGTTGTCAAATTTTCAAGAAGTTAATAGCGCTAAGCTCA
AATAACCGCATTTTCGACCAAAATACGGTGAACAACTCCTTCTCCCCCCC
CTCCCCCAAAACACGTCTTTCTCCCGTATTGTTCCGATAACACAGAATTG
GAACATGAATCCCATGAACGACCTAATTCTGATGCCAATATCTACCGATC
CTAAACGTTTAAAGTGAAATTGACGAATATATCGGCGAAAAAGCGGAAAA
ACACACATAGAATAGTTTGACCCGTGGGTAGTATATAGCTTAGCTGTCTT
GGTTGTTGAGAAGAGACCAATGCAATCCTCCTTTGGGCAAAACACCACAA
TGGATTTACCGTCGATGATTGCGCAAAAAAACTGCTGTTGAGGTTCCCTT
CCCTGCTGAGCTGACCACACTCCCGTTTGGCCTGCGCTATTCTTCCTTTC
CCGTTGGCTTTCCCCGTTCATCCTTCATATTTGGTCCTTTCATGATTCAA
GTTTACTAAACGTAACATCGTGCAACGGTTCGGCTGTTTCTCTTTTAGTC
TATTGATTTGTAGAGTACTTATTTACATGACACAGGTGTACGTCGGCAGA
TATCTCGCCTCTCAATCGCCTCTCCCATATCTTGTTGCTACACAACGCAC
TGCGCACCTGTCTATTGATGGCGTCATCGTCACCTAACAGTCCATTCATT
CCCTTCACTTGATGTATCGATAGTTTCCAAGGTTTTGCGGTACAATTGTA
GGGCTTCACGATTCAGATCACTATTTTCTCCACGTGAATACCTTCACTTC
CTTTTCTCCGCACTTAGCGTGTCTTCTGTACTCCAGCTTCTATATAGTCA
TCCTCCTTTACTCAATCTCCGGAGTCGGCCGACCGGCCTGCTTCGGTCCT
TGTATAATGTATTCTTATATTTACAGGTCTCAAAGAGTAGTACCTAATAC
CTAAACGTGTTCGACTCGCGCTTTTGTCTCTTCATATCTGCATGCCGATG
GTTTGAGTTTTACTGTGTTATGTTCAAAGCATATATCCGTGCTGTAGATG
TAGCTTTCACTTCTCACTGCCTCCTTCCATCTTGTTGTGATACTGCATCA
GTTTTGGGTTTGCAGGTAAGTAGGAAAGTGGGTCAGAGTGCATGTTTCAC
AGGTTGGTGTACATTCTGTGTGCATTATAACGCAGGTCCAATCAGTACAT
GATACCAAAACTCGAGTGCACTCAAATAGACTCGTTTCGTGATCGCCCGA
GATTTACATTATGGACCCCCTAACCCCTCTTCCGCCTCCCCGCCTCCCCC
CGTTCCTTATCAACAACACTAAAAAACAAAATATGGAAACCTCCACGGCA
AAAATAAATAATCGCTGCATGACTGACGCCTTCCGGCGGCGGGCAGTTAC
GGCAAGGTTAGCCGCAGCAGTCGACAACAACGGCCACGGCTGCCGTCGAC
CAGCGAGCGGCGAGGGATGACGGTGGAGGAGGAGATCGTCATGGCGCACG
AGGTGAGGACTCTGTCCGCCTACCTTTGGTCGAGGGAGTTTCTGGAAGAG
AGGCTGGGGAGGAGGGCCACTCGAAAGGAATGGGCGGCTAGTCTTGGTAT
CTCAGAGGAGGAGCTCTCGCGGCAGGTACGGTACGGTACGATGTGGTGTG
GTGTGGCGCCGTAATGTTGTCTATGGGTTAGGGTTGCGGCGTAGGCACTC
CAAATCAAAGTTCGACCCTTGGCCAATCTTTTGCCTTTCTTTATTTTGTT
GCTTTGTTTTGTGTCATTTTGAAACCAACACAACATATAATTTCTCCCCG
CCTGACTGAGCTTGATAGAGCACCAGCAGTTCAAGTACAGTATGGCGCCC
AGAGTATCATTGGCTGGGACGAACGCTTATCCCGGCAAACTCGATCTCAA
CCTGATGATTATGGTGCTCGTCGCTCCATGTTTGTGATGGGTTGCGAGGT
TTTTCTACGTGCACGCGGTGCTCGTGTGTGTAGCTTGCTAATAGCCTGTT
GCAGGAGTGTCGGAGGGTGTGTAGTCAGTCCATCAGTAATGCCAATCAGT
CCATATGTATATTATGTATGGGTTCTTTTTCCATTGCAAGGAAATGGACG
AACAATGAACAACTCTCGAAAAACGCGAGTGTGGGCCATCGCGTTCTTCT
GTTGGATGCCGCTGCACGAGGTTGGATTGCTGTTCCCCACCATAGCGTCG
ACATAGGATGTTCATTTTTCTTGGTCATACTGCCTTACTCCATAGTTGTA
ATTTTTGTTTTGTTCATTGTGCATGTGAACATCAGATGGCATTTCGTAGT
GGATTGGTGTACTAAATAGGCCGCACTATAGAGAGTAATGTAAACTCTAA
AACTAAAGGATCGTGGTAGGATAGAGGAGTATACTGCAAACTTAAACGCT
ATCTAGTCGCCGTGTGATGGAGGCGTCAATCAGTCGTTTGTTGAGGAAGA
CAATTTCGTCTCGTGAGAGTGGCTACAGTGCCCAAAACATCTTGACCTCG
GCAAACTCTCCGCTTTCCCTTGTATTTCCTGTTCCCAAATCAATCACGTG
CATGGAGTCAATTATCTGCGTGATTTCATCAATATCTTTCGTGATCATCA
TAATAATATATACATCTATTTTCAACTCCCAGGTAGAGGTTTCGCATCGC
GCCCAAGAGCGGATCGTAGAGTCTAACGTGGGCCTCGTCGTTATGATGGC
GAGAAGGCATCACCCCAAGATCTTCGCCGACTTGGGCGTCACGCGGGACG
ATATTATTCAGGAGGGCAGCATGGCCCTATTGCGGGCGGCGGAGACGTTC
GACCCCAACATGGGCTGCCGGTTCGCCACCTATGCTGGCTGGTGGGTGCG
TGACGGGGTGCAGCGTTGCGTGTCACGGCAGGCCAGACTCATCCGGCTGC
CTCAGCACGGTGAGTCGACCATCGTATCGAAGTAAGTGGTGGCCGAGCCT
AACGAACAGCACGGCACTTGTATCTGACCAGTCGGAATTTTGTGCAGCCG
CCGTTTAACCCCAAATATTCTCTTTAGCCGCGTGCCGATTGGTTGCCTGA
TGCCAAGTACGGTTCTGAGAGACGTTTTGGCCATAGCCTTAAGTGGAAAG
AGATAACAACAAGCTGTGTGCATCTGGTATAATGGATCAAGTGCAAGAAA
TCATCGATTGAAAAACAACGTGCGTGTCTAAGATTAGAAAATGATCAGTT
GGCGTAAAGAAAGGTGTTGTTACATGGTGTAGTAAGTTACTGTCGCCTCG
AAATAAAGGCGATTCGTCGCGATCGATTGATGAGTCACGAGTGCAAAAAT
TCCATGGAGACGTCTATTTGGGAAGTCTTTTGTATTTACTGCGCCTTCGT
CGGAATAGGTTTTCCTTAAATGTATCGGAACAGTTTGCAGTTTGCACACA
CAAGGTCACGTTTAATATTTTTCTTGGATGGACGAGTCGTGATCCATCCT
ACTGTCGGGGTTAGGATTGTTTTAGTTGTTATCTTGAAGTTGAAAGATTC
GAAGATTTGCACTTCGTGGCTTGCCGCGATGTGTGTATCTCATCGCGTAC
GAGAACCTGATGAGCTTCAGATATTTCTATCTTGAATTTATTTTAATTTT
GAATGTAGCGCGCCTGCTTTTTGATGAGATACGATTAGATTAGCTTGGTG
AATGTCGAGATATTATCGAGGAGATTTATTTAGTTCCATCCTATAACGGA
AACGGCACTCAAACTGTAGTCAGTTGAATGTTGTTGTGTACGTCTAATAA
AGCTGATAGTACTACTATATTTTTAGGCGTTGTCTTCGCGTTTTTTGTTC
TCCGTAGTATCTCGTGCGTTATCGAAGACGGTTAATCAATCCTTGAAAAA
CCTAGAGAAGTTGTGGGTTTCGGTGCGTGACACCACTTTTTTTTTTTTCC
CCACCTGGCATACAGGTGCATTTATCATTTATATGGTGTTGTAGAGACAA
GAAAGCTTTCTTTTGAAGCCGAGCGAGAAGCCCTCGTTTCTATTTTGTGT
TGGTTTATATAGCAGGACAGGATTACTCCGACAAGGCAGCGAATTTTCAA
TTCCTCTGCAACTTAGAGGACGCGGTGAACTCGATGGGATGACTATCCCT
AATATTTGTATCATGATGGACGACGTGGAAGGGAAGCACATCCGCAGTTG
GACACGCCAGTCTAGCCAAATACAATACTGAATTTCACTTCTCCTAATCG
AATTGCTAACTGTTGGCATTAGCGAACGTTCGACGGAGTCGAAGAGAGAT
GAGATGCATCGGCTCTTTTCCTCCTCTCGTTTTGGTTCGTGCCCCTCTTC
CCTCCCCGTTTTCGTCCACCTACCCCTTTCCCACGTTGTTCTCTCTCTCT
CTCTCTCTCTCTCTATTTTTAATGGTACCCTCTCGTTCTCTCTCTCGCCC
TTCCTTGTCTCCCTTGTCGTACACACATACACTTTTTCCCTTCGTCGTGA
ACGAAAAAAACAGTACACAATTTTATCAGGACCGCCACGAAGTCGGACGT
GGAACTTCGCGAGGAGCTAGGCCGAGAGCCGACAGTTCACGAACTCGCGA
AATACATGGGCGTAGACGTATCGCGTGTCCGCCTTTACTCTAACGTCCCC
GACGCCCTCTCTATGGAGGCTGCCCCGGGCGTACGGCGATCACCAGGGGC
AGGGAGCGGGGGCGGCGGTGGAGGAGCAGGGGGGGATTCCTCCGCGGACG
CGGGTTATCGGCACGAAACCGTGGCATGCGGGGGAATCACTCCAGAGCAA
CGCGCGGAGATGTTTCTTTTTCAGAGCAAGCTGGAGGAGCTGATGAGCGT
CTTGAGCCCCGACGAGAGACTAGTGGTGTCACTGAGGTATGGGCTTGACG
GTGCTCAGCCGACGACCCTCACGGAGCTCGCCGAGATGGCTGGAGCAAGC
AAGTACCGTGTACAGCGGGTGGAGTCGAGGGCTTTGAATAAGTTGCGGCG
GCCGGCGCGTAGCTCGGGGCACGAGCACTTGCTTCCTCCTACCATTGTTG
CCGATGGTGATAGTGGTGGTAATGGTGATGATGGGAAGTGGATTGGTTAT
GGTGTTGAGCATGGCGATACGTCATTACTAGATGAATATGGAGAGCAAGA
GGTGGCTGCTACTGGTCAGTCATTGGCGGAAAATGATCAGGGACGAGAAA
GAAGGAGATGATAAAACACGAAATTAGCACTAGCCATCGTTTTTTCAGTT
TTTTTTGGGGTGTTTGTGTATGTTTGATATCATTTTAATGATATTTTACA
GCTTTTGGTAAATAAAATTTGTTTCAGGTACTTCCGTAGACCGTAACTAG
AACTTGCGCTTTTTGTTTTCGTGTATTAAGGATGTGGGTTATTGGAGGTG
CGCACGTTGCCCTTGCGAGATCATGGGTTCAGTACAGTGATGCTGAAAGA
TGTCGAACGTGTGTTATGTTTCTCGTCGTTGTTATTTTCTCTTTAAATTA
TGTGTATCTTTGTGATTGCTCGTCTGGGGGAACATGAAATGTTTACCGTC
GGGTAGTGGGAAACTTCAAGTTTCAGGGGAGAACATAAATCATTAGAGGC
AATTTCA
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Coding sequence (CDS) from alignment at H-paniculata_contig1878:1487..12493-

>mRNA_H-paniculata_contig1878.4664.1 ID=mRNA_H-paniculata_contig1878.4664.1|Name=mRNA_H-paniculata_contig1878.4664.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2574bp|location=Sequence derived from alignment at H-paniculata_contig1878:1487..12493- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGTTGAGGGGACGGTTGGCCGTACGGCGAGCGACGTCGAGGCTACT
TGGGAAAGAGTTTGAGGGGTTTACCGGAGTGAGATGGGGTTGAGGGGACG
GTTGGCCGTACGGCGAGCGACGTCGAGGCTACTTGGGAAAGAGTTTGAGG
GGTTTACCGGAGTGAGTTACGGCAAGGTTAGCCGCAGCAGTCGACAACAA
CGGCCACGGCTGCCGTCGACCAGCGAGCGGCGAGGGATGACGGTGGAGGA
GGAGATCGTCATGGCGCACGAGGTGAGGACTCTGTCCGCCTACCTTTGGT
CGAGGGAGTTTCTGGAAGAGAGGCTGGGGAGGAGGGCCACTCGAAAGGAA
TGGGCGGCTAGTCTTGGTATCTCAGAGGAGGAGCTCTCGCGGCAGTTACG
GCAAGGTTAGCCGCAGCAGTCGACAACAACGGCCACGGCTGCCGTCGACC
AGCGAGCGGCGAGGGATGACGGTGGAGGAGGAGATCGTCATGGCGCACGA
GGTGAGGACTCTGTCCGCCTACCTTTGGTCGAGGGAGTTTCTGGAAGAGA
GGCTGGGGAGGAGGGCCACTCGAAAGGAATGGGCGGCTAGTCTTGGTATC
TCAGAGGAGGAGCTCTCGCGGCAGGTAGAGGTTTCGCATCGCGCCCAAGA
GCGGATCGTAGAGTCTAACGTGGGCCTCGTCGTTATGATGGCGAGAAGGC
ATCACCCCAAGATCTTCGCCGACTTGGGCGTCACGCGGGACGATATTATT
CAGGAGGGCAGCATGGCCCTATTGCGGGCGGCGGAGACGTTCGACCCCAA
CATGGGCTGCCGGTTCGCCACCTATGCTGGCTGGTGGGTGCGTGACGGGG
TGCAGCGTTGCGTGTCACGGCAGGCCAGACTCATCCGGCTGCCTCAGCAC
GGTAGAGGTTTCGCATCGCGCCCAAGAGCGGATCGTAGAGTCTAACGTGG
GCCTCGTCGTTATGATGGCGAGAAGGCATCACCCCAAGATCTTCGCCGAC
TTGGGCGTCACGCGGGACGATATTATTCAGGAGGGCAGCATGGCCCTATT
GCGGGCGGCGGAGACGTTCGACCCCAACATGGGCTGCCGGTTCGCCACCT
ATGCTGGCTGGTGGGTGCGTGACGGGGTGCAGCGTTGCGTGTCACGGCAG
GCCAGACTCATCCGGCTGCCTCAGCACGTACACAATTTTATCAGGACCGC
CACGAAGTCGGACGTGGAACTTCGCGAGGAGCTAGGCCGAGAGCCGACAG
TTCACGAACTCGCGAAATACATGGGCGTAGACGTATCGCGTGTCCGCCTT
TACTCTAACGTCCCCGACGCCCTCTCTATGGAGGCTGCCCCGGGCGTACG
GCGATCACCAGGGGCAGGGAGCGGGGGCGGCGGTGGAGGAGCAGGGGGGG
ATTCCTCCGCGGACGCGGGTTATCGGCACGAAACCGTGGCATGCGGGGGA
ATCACTCCAGAGCAACGCGCGGAGATGTTTCTTTTTCAGAGCAAGCTGGA
GGAGCTGATGAGCGTCTTGAGCCCCGACGAGAGACTAGTGGTGTCACTGA
GGTATGGGCTTGACGGTGCTCAGCCGACGACCCTCACGGAGCTCGCCGAG
ATGGCTGGAGCAAGCAAGTACCGTGTACAGCGGGTGGAGTCGAGGGCTTT
GAATAAGTTGCGGCGGCCGGCGCGTAGCTCGGGGCACGAGCACTTGCTTC
CTCCTACCATTGTTGCCGATGGTGATAGTGGTGGTAATGGTGATGATGGG
AAGTGGATTGGTTATGGTGTTGAGCATGGCGATACGTCATTACTAGATGA
ATATGGAGAGCAAGAGGTGGCTGCTACTGGTCAGTCATTGGCGGAAAATG
ATCAGGGACGAGAAAGAAGGAGATGATACACAATTTTATCAGGACCGCCA
CGAAGTCGGACGTGGAACTTCGCGAGGAGCTAGGCCGAGAGCCGACAGTT
CACGAACTCGCGAAATACATGGGCGTAGACGTATCGCGTGTCCGCCTTTA
CTCTAACGTCCCCGACGCCCTCTCTATGGAGGCTGCCCCGGGCGTACGGC
GATCACCAGGGGCAGGGAGCGGGGGCGGCGGTGGAGGAGCAGGGGGGGAT
TCCTCCGCGGACGCGGGTTATCGGCACGAAACCGTGGCATGCGGGGGAAT
CACTCCAGAGCAACGCGCGGAGATGTTTCTTTTTCAGAGCAAGCTGGAGG
AGCTGATGAGCGTCTTGAGCCCCGACGAGAGACTAGTGGTGTCACTGAGG
TATGGGCTTGACGGTGCTCAGCCGACGACCCTCACGGAGCTCGCCGAGAT
GGCTGGAGCAAGCAAGTACCGTGTACAGCGGGTGGAGTCGAGGGCTTTGA
ATAAGTTGCGGCGGCCGGCGCGTAGCTCGGGGCACGAGCACTTGCTTCCT
CCTACCATTGTTGCCGATGGTGATAGTGGTGGTAATGGTGATGATGGGAA
GTGGATTGGTTATGGTGTTGAGCATGGCGATACGTCATTACTAGATGAAT
ATGGAGAGCAAGAGGTGGCTGCTACTGGTCAGTCATTGGCGGAAAATGAT
CAGGGACGAGAAAGAAGGAGATGA
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