mRNA_H-paniculata_contig1875.4652.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1875.4652.1 vs. uniprot
Match: A0A6H5LKB4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LKB4_9PHAE) HSP 1 Score: 300 bits (769), Expect = 1.630e-93 Identity = 144/248 (58.06%), Postives = 179/248 (72.18%), Query Frame = 3
Query: 252 SAEATKDAMGGAIIPQTDAHTELRELPLVKPTHDHPDLDVPIELVLRFTSENEYEHVTWSPWKHLAEPYREAVLTAESTVGDPLNDVFSWWFPEEGNVALEGRVVKHTFETVGRKAVVLTQTVVATGQKFHLHGHIMVKYVRREIRQLHEADREAFFDAMETLYRLPTKEGNKVYGDIYKGIDFFVQMHLDGAGVKDCDHWHDDAGIMTHHIGYTLQFEQALQVVDPSIAIPYWEYTIDAAEGLDEYG 995
SA +T A+ G T H ++R+ + T VL TS N Y ++WSPW HLAEP+R +VL AES VG+P +DVF W P E + +GR +++TF GRK +VLTQTV +TG++ LH HIMVKYVRREIR LH +DR AFFDA+ETLYRLPT EG + +G YKGID+FVQ+HLDGAGVKDCDHWHDDAGIMTHH+G+TLQFEQA+Q+VDPS+ IPYWEY+I+A + LD YG
Sbjct: 62 SAPSTGAALSGGEEDDTSPHAQIRD----EETS-----------VLSLTSTNGYPDISWSPWAHLAEPHRASVLRAESQVGNPDDDVFLWTLPNENGASFQGREIEYTFTEPGRKDIVLTQTVTSTGERHTLHTHIMVKYVRREIRTLHNSDRVAFFDALETLYRLPTSEGVQQFGSDYKGIDYFVQLHLDGAGVKDCDHWHDDAGIMTHHVGFTLQFEQAMQLVDPSVTIPYWEYSIEATDDLDSYG 294
BLAST of mRNA_H-paniculata_contig1875.4652.1 vs. uniprot
Match: D7G0J8_ECTSI (Putative scytonemin-related tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J8_ECTSI) HSP 1 Score: 295 bits (756), Expect = 4.600e-91 Identity = 134/204 (65.69%), Postives = 162/204 (79.41%), Query Frame = 3
Query: 384 VLRFTSENEYEHVTWSPWKHLAEPYREAVLTAESTVGDPLNDVFSWWFPEEGNVALEGRVVKHTFETVGRKAVVLTQTVVATGQKFHLHGHIMVKYVRREIRQLHEADREAFFDAMETLYRLPTKEGNKVYGDIYKGIDFFVQMHLDGAGVKDCDHWHDDAGIMTHHIGYTLQFEQALQVVDPSIAIPYWEYTIDAAEGLDEYG 995
VL T+ N Y + WSPW HLAEP+R VL AES VG+P +DVF W P E + EGR +++ F GRK +VLTQTV +TG+++ LH +IMVKYVRREIR L+ ADR AFFD +ETLYRLPT +G + +G YKGID+FVQMHLDGAGVKDCDHWHDDAGIMTHH+GYTLQFEQA+Q+V+PS++IPYWEYTI+A EGL YG
Sbjct: 91 VLSLTATNGYPDIVWSPWVHLAEPHRATVLRAESQVGNPNDDVFLWTIPNENGASFEGREIEYIFTDPGRKDIVLTQTVTSTGERYSLHTYIMVKYVRREIRALNNADRVAFFDTLETLYRLPTSQGVEEFGTDYKGIDYFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQAMQLVNPSVSIPYWEYTIEATEGLPSYG 294
BLAST of mRNA_H-paniculata_contig1875.4652.1 vs. uniprot
Match: A0A6H5L3M0_9PHAE (PKD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M0_9PHAE) HSP 1 Score: 287 bits (735), Expect = 2.190e-88 Identity = 139/204 (68.14%), Postives = 158/204 (77.45%), Query Frame = 3
Query: 387 LRFTSENEYEHVTWSP-WKHLAEPYREAVLTAESTVGDPLNDVFSWWFPEEGNVALEGRVVKHTFETVGRKAVVLTQTVVATGQKFHLHGHIMVKYVRREIRQLHEADREAFFDAMETLYRLPTKEGNKVYGDIYKGIDFFVQMHLDGAGVKDCDHWHDDAGIMTHHIGYTLQFEQALQVVDPSIAIPYWEYTIDAAEGLDEYG 995
+ F N Y T S W H+AEP+R LTA STVGDP DVF W F + LEGR V++TF +VG V L Q V+TG + + H+MVKYVRREIRQL + DREAFFDAMETLYRLPT EGN VYGD YKGI+FFVQMHLDGAGVKDCDHWHDDAGIMTHH+GYTLQFEQALQVVDPS++IPYWEYTI++A+GL EYG
Sbjct: 92 ITFQCTNGYPPATTSTKWDHIAEPHRSTTLTASSTVGDPDADVFQWSFGD--GTVLEGRTVEYTFTSVGLHDVALRQIDVSTGNVYRMSSHVMVKYVRREIRQLKDEDREAFFDAMETLYRLPTSEGNAVYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESAQGLTEYG 293
BLAST of mRNA_H-paniculata_contig1875.4652.1 vs. uniprot
Match: D7FSP4_ECTSI (PKD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSP4_ECTSI) HSP 1 Score: 286 bits (733), Expect = 7.770e-88 Identity = 138/202 (68.32%), Postives = 160/202 (79.21%), Query Frame = 3
Query: 387 LRFTSENEYEHVTWSPWKHLAEPYREAVLTAESTVGDPLNDVFSWWFPEEGNVALEGRVVKHTFETVGRKAVVLTQTVVATGQKFHLHGHIMVKYVRREIRQLHEADREAFFDAMETLYRLPTKEGNKVYGDIYKGIDFFVQMHLDGAGVKDCDHWHDDAGIMTHHIGYTLQFEQALQVVDPSIAIPYWEYTIDAAEGLDEY 992
L F S NEY T SPW HLAEP+R+ TA ST+G P DVF W F E+G V LEGR VKH F+T+GR+ V L+Q VV+TG G +MVKYVRREIR L + DREAFFDAMETLYRLPT EG ++YG+ YKGI+FFVQMHL+GAGV DCDHWHDDAGIMTHH+GYTL FEQALQVVDP++ IPYWEYTI+AA GL++Y
Sbjct: 108 LSFVSSNEYLPTTGSPWTHLAEPFRDTTFTASSTLGRPDEDVFKWSF-EDGTV-LEGREVKHNFKTLGRQRVSLSQIVVSTGNTHETVGSVMVKYVRREIRSLTDKDREAFFDAMETLYRLPTVEGRELYGEEYKGINFFVQMHLNGAGVSDCDHWHDDAGIMTHHVGYTLLFEQALQVVDPAVTIPYWEYTIEAAAGLEDY 307
BLAST of mRNA_H-paniculata_contig1875.4652.1 vs. uniprot
Match: D7G0J9_ECTSI (PKD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J9_ECTSI) HSP 1 Score: 266 bits (679), Expect = 4.690e-80 Identity = 128/197 (64.97%), Postives = 152/197 (77.16%), Query Frame = 3
Query: 405 NEYEHVTWSPWKHLAEPYREAVLTAESTVGDPLNDVFSWWFPEEGNVALEGRVVKHTFETVGRKAVVLTQTVVATGQKFHLHGHIMVKYVRREIRQLHEADREAFFDAMETLYRLPTKEGNKVYGDIYKGIDFFVQMHLDGAGVKDCDHWHDDAGIMTHHIGYTLQFEQALQVVDPSIAIPYWEYTIDAAEGLDEYG 995
N Y + S W +LAEP+R+ LTA S+VGDP DVF W F E+G V LEGR V + F+ VG + V L QT+V+TG+ + +MVKYVRRE+RQL DREAF DAME LYRLPT+EG +YGD YKGI FFVQMHLDGAGV DCDHWHDDAGIMTHH+GYT+ FEQALQVVDPS+ IPYWEYTI+ ++GL +YG
Sbjct: 101 NAYPRLANSAWANLAEPFRDTTLTAGSSVGDPDRDVFKWSF-EDGTV-LEGREVTYMFKGVGAQTVSLAQTMVSTGRIVQIEDSVMVKYVRREVRQLKAEDREAFLDAMEKLYRLPTEEGVALYGDDYKGISFFVQMHLDGAGVSDCDHWHDDAGIMTHHVGYTMLFEQALQVVDPSVTIPYWEYTIEYSQGLTDYG 295
BLAST of mRNA_H-paniculata_contig1875.4652.1 vs. uniprot
Match: A0A6H5KFJ6_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ6_9PHAE) HSP 1 Score: 244 bits (623), Expect = 2.350e-73 Identity = 123/200 (61.50%), Postives = 146/200 (73.00%), Query Frame = 3
Query: 405 NEYEHVTWSPWKHLAEPYREAVLTAESTVGDPLNDVFSWWFPEEGNVALEGRVVKHTFETVGRKAVVLTQTVVATGQKFHLHGHIMVKYVRREIRQLHEADREAFFDAMETLYRLPTKEGNKVYGDIYKGIDFFVQMHLDGAGVKDCDHWHDDAGIMTHHIGYTLQFEQALQVVDPSIAIPYWEYTIDA---AEGLDEYG 995
N Y + S W LAEP+RE LTA S+VGDP DVF W F E+G V LEGR V + F+ VG + V L QT+V+TG+ + +MVKYVRRE+RQL DREAF DAMETLYRLPT+EG +YGD YK MHLDGAGV DCDHWHDDAGIMTHH+GYT+ FEQALQVVDP++ IPYWEYTI+ ++GL +YG
Sbjct: 18 NAYPRLANSAWAKLAEPFRETTLTAGSSVGDPDKDVFKWSF-EDGTV-LEGREVTYIFKGVGAQTVFLAQTIVSTGRIVQIEDTVMVKYVRREVRQLRAEDREAFLDAMETLYRLPTEEGVALYGDDYK-------MHLDGAGVSDCDHWHDDAGIMTHHVGYTMLFEQALQVVDPAVTIPYWEYTIECGCHSQGLTDYG 208
BLAST of mRNA_H-paniculata_contig1875.4652.1 vs. uniprot
Match: D7G0K0_ECTSI (Tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K0_ECTSI) HSP 1 Score: 228 bits (582), Expect = 1.080e-67 Identity = 106/146 (72.60%), Postives = 123/146 (84.25%), Query Frame = 3
Query: 558 RVVKHTFETVGRKAVVLTQTVVATGQKFHLHGHIMVKYVRREIRQLHEADREAFFDAMETLYRLPTKEGNKVYGDIYKGIDFFVQMHLDGAGVKDCDHWHDDAGIMTHHIGYTLQFEQALQVVDPSIAIPYWEYTIDAAEGLDEYG 995
R VKH F+ VGR V L Q VV+TG+ +H+ +MVKYVRREIRQL + DREAFFDAMETLYRLPT EG +YG+ YKGI+FFVQMHLDGA VK+CDHWHDDAGI+THH+G+TL FEQALQVVDPS++IPYWEYTI+AA GL YG
Sbjct: 3 RRVKHKFKAVGRHEVSLMQIVVSTGEVYHMSSSVMVKYVRREIRQLTDKDREAFFDAMETLYRLPTGEGVALYGEDYKGIEFFVQMHLDGAAVKECDHWHDDAGIVTHHVGFTLLFEQALQVVDPSVSIPYWEYTIEAALGLANYG 148
BLAST of mRNA_H-paniculata_contig1875.4652.1 vs. uniprot
Match: A0A6V1TYR0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TYR0_HETAK) HSP 1 Score: 175 bits (444), Expect = 3.740e-46 Identity = 94/217 (43.32%), Postives = 136/217 (62.67%), Query Frame = 3
Query: 363 LDVPIELVLRFTSENEYEHVT--WSPWKHLAEPYREAVLTAESTVGD---PLNDVFSWWFPEEGNVA-LEGRVVKHTFETVGRKAVVLTQTVVATGQKFHLHGHIMVKYVRREIRQLHEADREAFFDAMETLYRLPTKEGNKVYGDIYKGIDFFVQMHLDGAGVKDCDHWHDDAGIMTHHIGYTLQFEQALQVVDPSIAIPYWEYTIDAAEGLDEYG 995
+D E L+F S NEY VT + W+H+AEP+R V T E+T P + + + +G V L+ + TF TVG K+V LT ++G + ++VKYVRREIR L + DR+ DA+ET+YR+ + G ++YG+ Y+ I F + HL+GAG CD WHDDAGI+THH+G+T++FE+ +Q++DP I++PYWEYTID D YG
Sbjct: 68 IDYTDETSLKFASSNEYTRVTPIKAVWEHIAEPFR--VTTLEATFDGEVIPNHHHLDFTWEVDGEVQKLKANAIDLTFTTVGLKSVKLTIADSSSGSVGNYESEVVVKYVRREIRSLTDEDRKRTLDAIETIYRVDQQTGEELYGENYRSIVSFSKEHLNGAGRLGCDSWHDDAGIVTHHLGFTIEFEEVMQLIDPMISLPYWEYTIDT----DLYG 278
BLAST of mRNA_H-paniculata_contig1875.4652.1 vs. uniprot
Match: A0A7S2CGQ1_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CGQ1_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.250e-43 Identity = 86/196 (43.88%), Postives = 115/196 (58.67%), Query Frame = 3
Query: 387 LRFTSENEY-EHVTWSPWKHLAEPYREAVLTAESTVGDPLNDVFSWWFPEEGNVALEGRVVKHTFETVGRKAVVLTQTVVATGQKFHLHGHIMVKYVRREIRQLHEADREAFFDAMETLYRLPTKEGNKVYGDIYKGIDFFVQMHLDGAGVKDCDHWHDDAGIMTHHIGYTLQFEQALQVVDPSIAIPYWEYTIDA 971
L+F+ NEY + V W H+ EPYR LTA D + W G+ +V +TF+ VG V ++ T + K + KYVRRE+R + +DRE F D + LY L TK+G YG+ YK I +FV+ HL GA DCDHWHD+AGIMTHH+ +TL+ EQ LQ VDP+I++PYWEYT D+
Sbjct: 80 LKFSVSNEYGQSVKGYKWDHIVEPYRLTTLTAILN-DDDQEGTYIWVV---GDTVSSTKVAYYTFQDVGFNLVNVSWTSLDGETKLSASSQVACKYVRREMRAMTVSDRERFLDTLRLLYDLKTKDGQASYGEKYKDIHYFVKKHLHGAAALDCDHWHDNAGIMTHHLAFTLELEQTLQAVDPAISVPYWEYTKDS 271
BLAST of mRNA_H-paniculata_contig1875.4652.1 vs. uniprot
Match: A0A7S3Y4W0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4W0_HETAK) HSP 1 Score: 163 bits (413), Expect = 1.030e-42 Identity = 86/204 (42.16%), Postives = 118/204 (57.84%), Query Frame = 3
Query: 387 LRFTSENEYEHVTW--SPWKHLAEPYREAVLTAESTVGDPLNDVFSWWFPEEGNVALEGRVVKHTFETVGRKAVVLT-QTVVATGQKFHLHGHIMVKYVRREIRQLHEADREAFFDAMETLYRLPTKEGNKVYGDIYKGIDFFVQMHLDGAGVKDCDHWHDDAGIMTHHIGYTLQFEQALQVVDPSIAIPYWEYTIDAAEGLDE 989
L F + N Y T S W H+AEPYRE A+ D+ W + + + + HTF + G +V +T G+K ++VKYVRREIR L DRE +AME +YRL +G +YG ++ I F HLDGAG +CDHWHDDAG+ HH G+T+QFE+ +Q++DP +++PYWEYT+DA E LDE
Sbjct: 76 LSFATYNSYTKDTPIDSMWTHVAEPYRETTFRAKVPTEWLSADLEIVWEIDGQVLPDKDTTIVHTFTSTGPTSVAVTIANPERFGEKETYRSDVVVKYVRREIRSLTADDRERTLNAMEAIYRLSQTDGEALYGPNFRSIGSFQVQHLDGAGRMECDHWHDDAGLAAHHFGFTIQFEEVMQLIDPLVSLPYWEYTLDA-ENLDE 278 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1875.4652.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1875.4652.1 >prot_H-paniculata_contig1875.4652.1 ID=prot_H-paniculata_contig1875.4652.1|Name=mRNA_H-paniculata_contig1875.4652.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=299bp MRSICGCSLLCCLLLGASNNVTSDSNYARTTGESLGTSTPGESLLHADTLback to top mRNA from alignment at H-paniculata_contig1875:3605..15147+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1875.4652.1 ID=mRNA_H-paniculata_contig1875.4652.1|Name=mRNA_H-paniculata_contig1875.4652.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11543bp|location=Sequence derived from alignment at H-paniculata_contig1875:3605..15147+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1875:3605..15147+ >mRNA_H-paniculata_contig1875.4652.1 ID=mRNA_H-paniculata_contig1875.4652.1|Name=mRNA_H-paniculata_contig1875.4652.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1794bp|location=Sequence derived from alignment at H-paniculata_contig1875:3605..15147+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |