prot_H-paniculata_contig18743.4650.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18743.4650.1
Unique Nameprot_H-paniculata_contig18743.4650.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length126
Homology
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BLAST of mRNA_H-paniculata_contig18743.4650.1 vs. uniprot
Match: A0A6H5JSK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSK9_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 7.630e-46
Identity = 88/120 (73.33%), Postives = 102/120 (85.00%), Query Frame = 0 
Query:    9 PRQTAISLTCDLVDRVGRGHWRH--ESGEDDEANCLSVLVECREAFWSMDKVTERLVLATAGLAVRAWRAGSDATTRAALCFCATTVPSVPSALRRLALLQLCANAALQVGKPALADALF 126
            PRQ+A++LTCD+VDRVGRG W    + G   EA+ L VL ECR+AFW MD+VT+RLVLA AGL++RAWRAGS AT RAALCFC+ TVPSVPSALRRLALLQLCA+ ALQ+GKPALADALF
Sbjct:  658 PRQSAVALTCDMVDRVGRG-WAQPPQPGGTGEASRLEVLAECRQAFWGMDEVTDRLVLAAAGLSLRAWRAGSTATARAALCFCSLTVPSVPSALRRLALLQLCASTALQIGKPALADALF 776
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BLAST of mRNA_H-paniculata_contig18743.4650.1 vs. uniprot
Match: D8LLV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV5_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 3.330e-42
Identity = 86/130 (66.15%), Postives = 99/130 (76.15%), Query Frame = 0 
Query:   10 RQTAISLTCDLVDRVGRGHWRHES-------------GEDDEANCLSVLVECREAFWSMDKVTERLVLATAGLAVRAWRAGSDATTRAALCFCATTVPSVPSALRRLALLQLCANAALQVGKPALADALF 126
            RQ+A++LTCD+VDRVGRG W                     EA+ L VL ECR+AFW MD+VT+RLVLA AGL++RAWRAGS AT RAALCFC+ TVPSVPSALRRLALLQLCA+ ALQ+GKPALADALF
Sbjct:  945 RQSAVALTCDMVDRVGRG-WAEPPQXXXXXXXXXXXXXXXXEASRLEVLAECRQAFWGMDEVTDRLVLAAAGLSLRAWRAGSTATARAALCFCSLTVPSVPSALRRLALLQLCASTALQIGKPALADALF 1073
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BLAST of mRNA_H-paniculata_contig18743.4650.1 vs. uniprot
Match: A0A067C8Y7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C8Y7_SAPPC)

HSP 1 Score: 55.5 bits (132), Expect = 2.290e-6
Identity = 39/106 (36.79%), Postives = 54/106 (50.94%), Query Frame = 0 
Query:   13 AISLTCDLVDRVGRGHWRHESGEDDEANCLSVLVECREAFWSMDKVTERLVLATAGLAVRAWRAGSDATTR----AALCFCATTVPSVPSALRRLALLQLCANAAL 114
            A SL C+ V  +     R     D E   L +LV+CR AF+ +DKV   L+     LAVRA+      +TR      L +C  T+PS+P  L +L+L+  CA  AL
Sbjct:  667 AASLLCNFVLALDAALTR-----DGEDALLQLLVDCRSAFYKLDKVKACLIRRVLALAVRAYPRIHMTSTRNFVKGCLAYCHITIPSLPDPLEKLSLMTACAKVAL 767
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18743.4650.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JSK9_9PHAE7.630e-4673.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLV5_ECTSI3.330e-4266.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A067C8Y7_SAPPC2.290e-636.79Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029705VPS35 endosomal protein sorting factor-likePANTHERPTHR13673ESOPHAGEAL CANCER ASSOCIATED PROTEINcoord: 10..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18743contigH-paniculata_contig18743:2570..3936 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18743.4650.1mRNA_H-paniculata_contig18743.4650.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18743 2276..3936 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18743.4650.1 ID=prot_H-paniculata_contig18743.4650.1|Name=mRNA_H-paniculata_contig18743.4650.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bp
MQLYLTKTPRQTAISLTCDLVDRVGRGHWRHESGEDDEANCLSVLVECRE
AFWSMDKVTERLVLATAGLAVRAWRAGSDATTRAALCFCATTVPSVPSAL
RRLALLQLCANAALQVGKPALADALF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029705VPS35L