prot_H-paniculata_contig1874.4649.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1874.4649.1
Unique Nameprot_H-paniculata_contig1874.4649.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length174
Homology
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BLAST of mRNA_H-paniculata_contig1874.4649.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 2.930e-6
Identity = 58/189 (30.69%), Postives = 73/189 (38.62%), Query Frame = 0 
Query:   44 DGRDGEDED-----GPCPKKQRRVYARPLYSESAWRRMLQSPYSL-----------------------------FVELMKVVQEGQWFPKREGHVDVAGRQMVPVELKVPASLQILGRGNSFDE-------------------------DLFHGWIKLPTEDALVATMKAYDAVDFTEAVDSTDVTHIA 173
            DG   E+E      GPC ++ R    RP YS SAW   L +  SL                             FV+L++ V     FP      DVAGRQ VP+ELKV   LQ+LGRGN F +                          L+H W+ LP  + L      Y  +    AV S D THI+
Sbjct:   15 DGWSDEEEXXXEDFGPCDRETRE---RPDYSSSAWGVRLANLESLRIAGRLVPSSREAKAFRSDFRVPHEFFRHFVDLVRTV-----FPTATR--DVAGRQCVPLELKVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHIS 193
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1874.4649.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JV45_9PHAE2.930e-630.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1874contigH-paniculata_contig1874:17843..19592 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1874.4649.1mRNA_H-paniculata_contig1874.4649.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1874 16739..19756 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1874.4649.1 ID=prot_H-paniculata_contig1874.4649.1|Name=mRNA_H-paniculata_contig1874.4649.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=174bp
MSSLRQNAVEAAVDAAFAVASTVLSQLKDTLACVYLILEQPPRDGRDGED
EDGPCPKKQRRVYARPLYSESAWRRMLQSPYSLFVELMKVVQEGQWFPKR
EGHVDVAGRQMVPVELKVPASLQILGRGNSFDEDLFHGWIKLPTEDALVA
TMKAYDAVDFTEAVDSTDVTHIA*
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