mRNA_H-paniculata_contig18734.4645.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18734.4645.1 vs. uniprot
Match: D8LU79_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU79_ECTSI) HSP 1 Score: 208 bits (530), Expect = 5.310e-66 Identity = 98/108 (90.74%), Postives = 104/108 (96.30%), Query Frame = 1
Query: 16 DKECFLQRFWEKTRQLTPADIAQALHDEDELEVVHEEAAQEGQSNQIAREEKINTHFVCLSEVDGTLYELDGRKDGPIPHGPTSPSTLLQDACAVVKQFMDRDPGELR 339
DKECFL RFWEKTRQLTPA IAQALHDEDELE VHEEAAQEGQS+QIAREEKINTHFVCL+E+DGTLYELDGRK+GP+PHG TSP+TLLQDACAVVKQFMDRDPGELR
Sbjct: 133 DKECFLHRFWEKTRQLTPAQIAQALHDEDELEEVHEEAAQEGQSDQIAREEKINTHFVCLTEMDGTLYELDGRKEGPVPHGSTSPATLLQDACAVVKQFMDRDPGELR 240
BLAST of mRNA_H-paniculata_contig18734.4645.1 vs. uniprot
Match: A0A1V9YLF7_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YLF7_9STRA) HSP 1 Score: 135 bits (339), Expect = 2.950e-37 Identity = 67/105 (63.81%), Postives = 81/105 (77.14%), Query Frame = 1
Query: 28 FLQRFWEKTRQLTPADIAQALHDEDELEVVHEEAAQEGQSNQIAR-EEKINTHFVCLSEVDGTLYELDGRKDGPIPHGPTSPSTLLQDACAVVKQFMDRDPGELR 339
FLQ F+ KTR TPA+IA+ L ++DELE H AAQEGQS+Q+ ++ INTHFVCLS VDG LYELDGRK PI HGP+S +TLL+DAC VV+ FM RD GE+R
Sbjct: 126 FLQSFFAKTRDKTPAEIAEILEEDDELEETHASAAQEGQSDQLEHIDDPINTHFVCLSVVDGHLYELDGRKAFPINHGPSSSATLLEDACRVVRDFMQRDEGEVR 230
BLAST of mRNA_H-paniculata_contig18734.4645.1 vs. uniprot
Match: A0A6G0W7W6_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W7W6_9STRA) HSP 1 Score: 132 bits (331), Expect = 4.830e-36 Identity = 65/110 (59.09%), Postives = 79/110 (71.82%), Query Frame = 1
Query: 13 PDKECFLQRFWEKTRQLTPADIAQALHDEDELEVVHEEAAQEGQSNQIAR-EEKINTHFVCLSEVDGTLYELDGRKDGPIPHGPTSPSTLLQDACAVVKQFMDRDPGELR 339
P FL F++KT TP +IA+ L D+DELE H AAQEGQS Q+ ++ INTHFVC S V+G LYELDGRK PI HGP+SP TLL+DAC V+K+FM RD GE+R
Sbjct: 122 PRPGSFLATFFDKTHGKTPDEIAEILEDDDELEETHASAAQEGQSEQLEHVDDPINTHFVCFSTVEGHLYELDGRKQFPINHGPSSPETLLEDACRVIKEFMARDEGEVR 231
BLAST of mRNA_H-paniculata_contig18734.4645.1 vs. uniprot
Match: H3H379_PHYRM (Ubiquitin carboxyl-terminal hydrolase n=15 Tax=Phytophthora TaxID=4783 RepID=H3H379_PHYRM) HSP 1 Score: 128 bits (321), Expect = 1.430e-34 Identity = 62/105 (59.05%), Postives = 77/105 (73.33%), Query Frame = 1
Query: 28 FLQRFWEKTRQLTPADIAQALHDEDELEVVHEEAAQEGQSNQIAR-EEKINTHFVCLSEVDGTLYELDGRKDGPIPHGPTSPSTLLQDACAVVKQFMDRDPGELR 339
+L +F+ T+ TP +IAQ L ++DELE H AA+ GQS Q+ ++ INTHFVC S VDGTLYELDGRK PI HGP+SP TLLQDAC +K+FM RD GE+R
Sbjct: 124 YLDKFFNTTKTKTPEEIAQYLEEDDELEETHGSAAEAGQSEQLESVDDPINTHFVCFSCVDGTLYELDGRKKRPINHGPSSPDTLLQDACQAIKKFMARDEGEMR 228
BLAST of mRNA_H-paniculata_contig18734.4645.1 vs. uniprot
Match: A0A3F2RNT3_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RNT3_9STRA) HSP 1 Score: 127 bits (319), Expect = 2.850e-34 Identity = 61/105 (58.10%), Postives = 78/105 (74.29%), Query Frame = 1
Query: 28 FLQRFWEKTRQLTPADIAQALHDEDELEVVHEEAAQEGQSNQIAR-EEKINTHFVCLSEVDGTLYELDGRKDGPIPHGPTSPSTLLQDACAVVKQFMDRDPGELR 339
+L +F+ KT+ TP +IAQ L ++DELE H AA+ GQS Q+ ++ INTHFVC S VDG LYELDGRK PI HGP+SP+T+L DACA +K+FM RD GE+R
Sbjct: 124 YLDKFFNKTKTKTPKEIAQYLEEDDELEETHGSAAEAGQSEQLETVDDPINTHFVCFSHVDGHLYELDGRKKHPINHGPSSPTTVLPDACAEIKKFMARDEGEMR 228
BLAST of mRNA_H-paniculata_contig18734.4645.1 vs. uniprot
Match: W4GMT7_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMT7_9STRA) HSP 1 Score: 127 bits (318), Expect = 4.240e-34 Identity = 64/110 (58.18%), Postives = 77/110 (70.00%), Query Frame = 1
Query: 13 PDKECFLQRFWEKTRQLTPADIAQALHDEDELEVVHEEAAQEGQSNQIAR-EEKINTHFVCLSEVDGTLYELDGRKDGPIPHGPTSPSTLLQDACAVVKQFMDRDPGELR 339
P FL F+ KT TP +IA L +DE+E H AAQ+GQS Q+ ++ INTHFVC S VDG LYELDGRK+ PI HGP+SP TLL DACAV++QFM RD GE+R
Sbjct: 121 PRHGSFLSSFFSKTDGKTPDEIAAILQADDEIEETHASAAQDGQSEQLEHVDDPINTHFVCFSVVDGHLYELDGRKEFPINHGPSSPETLLGDACAVIRQFMARDEGEVR 230
BLAST of mRNA_H-paniculata_contig18734.4645.1 vs. uniprot
Match: A0A7S2FEQ2_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FEQ2_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.020e-33 Identity = 55/107 (51.40%), Postives = 75/107 (70.09%), Query Frame = 1
Query: 19 KECFLQRFWEKTRQLTPADIAQALHDEDELEVVHEEAAQEGQSNQIAREEKINTHFVCLSEVDGTLYELDGRKDGPIPHGPTSPSTLLQDACAVVKQFMDRDPGELR 339
K C+++RF TR + P +IA L +DE+E H AA EG + EE + THF+C +EV+G LYELDGRK GP+ HGP++P+TLL DAC V++ F++RDPGE R
Sbjct: 24 KGCYIERFLTATRNMAPEEIAAFLEKDDEIEEQHTTAAFEGSTAPPLPEENVTTHFICFTEVEGILYELDGRKTGPVNHGPSAPTTLLSDACCVIRGFIERDPGEHR 130
BLAST of mRNA_H-paniculata_contig18734.4645.1 vs. uniprot
Match: A0A485KZ13_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZ13_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.550e-33 Identity = 62/110 (56.36%), Postives = 76/110 (69.09%), Query Frame = 1
Query: 13 PDKECFLQRFWEKTRQLTPADIAQALHDEDELEVVHEEAAQEGQSNQIAR-EEKINTHFVCLSEVDGTLYELDGRKDGPIPHGPTSPSTLLQDACAVVKQFMDRDPGELR 339
P + FL F+ KT+ TP ++A L +DELE H AAQ GQS Q+ ++ INTHFVC S VDG LYELDGRK PI HGP+S TLL+DAC V++QFM RD GE+R
Sbjct: 124 PRPDSFLATFFAKTQDKTPEEMAAILEADDELEETHASAAQAGQSEQLEHVDDPINTHFVCFSAVDGHLYELDGRKQFPINHGPSSSDTLLEDACGVIQQFMARDKGEVR 233
BLAST of mRNA_H-paniculata_contig18734.4645.1 vs. uniprot
Match: G4ZZ94_PHYSP (Ubiquitinyl hydrolase 1 n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZZ94_PHYSP) HSP 1 Score: 129 bits (325), Expect = 1.420e-32 Identity = 62/105 (59.05%), Postives = 78/105 (74.29%), Query Frame = 1
Query: 28 FLQRFWEKTRQLTPADIAQALHDEDELEVVHEEAAQEGQSNQIAR-EEKINTHFVCLSEVDGTLYELDGRKDGPIPHGPTSPSTLLQDACAVVKQFMDRDPGELR 339
+L +F+ KT+ TP +IAQ L ++DELE H AA+ GQS Q+ ++ INTHFVC S VDG LYELDGRK PI HGP+SP T+LQDAC V+K+FM RD GE+R
Sbjct: 219 YLDKFFNKTKTKTPEEIAQYLEEDDELEETHSSAAEAGQSEQLESVDDPINTHFVCFSCVDGNLYELDGRKKRPINHGPSSPDTVLQDACQVIKKFMARDEGEMR 323
BLAST of mRNA_H-paniculata_contig18734.4645.1 vs. uniprot
Match: A0A0P1AL29_PLAHL (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AL29_PLAHL) HSP 1 Score: 120 bits (301), Expect = 1.040e-31 Identity = 60/103 (58.25%), Postives = 72/103 (69.90%), Query Frame = 1
Query: 28 FLQRFWEKTRQLTPADIAQALHDEDELEVVHEEAAQEGQSNQIAR-EEKINTHFVCLSEVDGTLYELDGRKDGPIPHGPTSPSTLLQDACAVVKQFMDRDPGE 333
+L F+ +T TP +IAQ L +DELE H AA GQS Q+ ++ INTHFVC S VDG LYELDGRK PI HGP+SP T+LQDAC V+K+FM RD GE
Sbjct: 124 YLDNFFHETETKTPMEIAQYLEKDDELEKTHSSAAVAGQSEQLESVDDPINTHFVCFSCVDGHLYELDGRKKRPINHGPSSPETVLQDACQVIKKFMARDEGE 226 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18734.4645.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18734.4645.1 >prot_H-paniculata_contig18734.4645.1 ID=prot_H-paniculata_contig18734.4645.1|Name=mRNA_H-paniculata_contig18734.4645.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp MFWFPDKECFLQRFWEKTRQLTPADIAQALHDEDELEVVHEEAAQEGQSNback to top mRNA from alignment at H-paniculata_contig18734:2765..4590- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18734.4645.1 ID=mRNA_H-paniculata_contig18734.4645.1|Name=mRNA_H-paniculata_contig18734.4645.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1826bp|location=Sequence derived from alignment at H-paniculata_contig18734:2765..4590- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18734:2765..4590- >mRNA_H-paniculata_contig18734.4645.1 ID=mRNA_H-paniculata_contig18734.4645.1|Name=mRNA_H-paniculata_contig18734.4645.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=684bp|location=Sequence derived from alignment at H-paniculata_contig18734:2765..4590- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |