mRNA_H-paniculata_contig18725.4640.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18725.4640.1 vs. uniprot
Match: A0A7S2WSV1_9STRA (Sulfhydryl oxidase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSV1_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 6.040e-9 Identity = 33/97 (34.02%), Postives = 47/97 (48.45%), Query Frame = 1
Query: 1 CAECRKHFLEMYEGGDNGLLEIPSKQALAAATQEARPARSYRGDVQLALWLWRTHNAVNTRLAKDSGGGVAKAEA-----EVEDKSLWPQAATCPQC 276
C+ CR+HFL+M++ G +I RS LALWLWR HN VN+R+A +S A ++ E++ +LWP CP C
Sbjct: 345 CSHCRQHFLQMFDECWGGRCDIGDD-------------RSEESQRALALWLWRAHNTVNSRVAVESAELAASPDSPLVAPELQAWALWPSTELCPAC 428
BLAST of mRNA_H-paniculata_contig18725.4640.1 vs. uniprot
Match: A0A8C2V6C1_CHILA (Sulfhydryl oxidase n=3 Tax=Chinchilla lanigera TaxID=34839 RepID=A0A8C2V6C1_CHILA) HSP 1 Score: 60.8 bits (146), Expect = 2.190e-8 Identity = 41/118 (34.75%), Postives = 48/118 (40.68%), Query Frame = 1
Query: 1 CAECRKHFLEMYEGGDNGLLEIPSKQALAAATQEARPARSYRGDVQLALWLWRTHNAVNTRLAKDSGGGVAKAEAEVEDKSLWPQAATCPQCWNGYSEAESQPPWHENNVVEFLKATY 354
C EC +HF EM S A+ A Q LWLWR HNAVN+RLA +E K LWP CP C + E + WHE V+ FLK Y
Sbjct: 466 CQECGQHFEEM---------AAESLDAVKTADQAV-------------LWLWRRHNAVNSRLAGQL------SEDPKFPKVLWPTPDLCPAC---HEEIKGLDSWHEGQVLAFLKQHY 552
BLAST of mRNA_H-paniculata_contig18725.4640.1 vs. uniprot
Match: A0A7S2Y5C4_9STRA (Sulfhydryl oxidase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y5C4_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 2.960e-8 Identity = 36/119 (30.25%), Postives = 53/119 (44.54%), Query Frame = 1
Query: 1 CAECRKHFLEMYEGGDNGLLEIPSKQALAAATQEARPARSYRGDVQLALWLWRTHNAVNTRLAKDSGGGVAKA-EAEVEDKSLWPQAATCPQCWNGYSEAESQPPWHENNVVEFLKATY 354
C ECR +F+ Y D + + + A + + ++L LWL+ THNAVN RL K+ +A + E S WP CP+CW W + NV +FL+ Y
Sbjct: 35 CNECRLNFVNAY---DQCMFDRCHRLKEADDPSAEQTQEEW---MELPLWLFETHNAVNLRLMKEKATREKRAWNHQDEVNSRWPSTEDCPRCWR------EDGAWDDLNVYKFLRTEY 141
BLAST of mRNA_H-paniculata_contig18725.4640.1 vs. uniprot
Match: A0A7S2V2Z3_9STRA (Sulfhydryl oxidase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Z3_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 5.320e-8 Identity = 33/117 (28.21%), Postives = 48/117 (41.03%), Query Frame = 1
Query: 1 CAECRKHFLEMYEGGDNGLLEIPSKQALAAATQEARPARSYRGDVQLALWLWRTHNAVNTRLAKDSGGGVAKAEAEVEDKSLWPQAATCPQCWNGYSEAESQPPWHENNVVEFLKAT 351
C CR HF+E ++ +I ++ D +L LWLWR HN VN R A+ G E E + LWP CPQC S W++ V+ ++ +
Sbjct: 28 CRHCRDHFMEGHKSCKFRQCDIREEE---------------EDDQELVLWLWRVHNDVNERTARQKG-----VEDEELPRHLWPAEIHCPQC-RDQVHPNSTVSWNQGQVLRHIQTS 123
BLAST of mRNA_H-paniculata_contig18725.4640.1 vs. uniprot
Match: UPI00034FF448 (sulfhydryl oxidase 2 isoform X1 n=2 Tax=Heterocephalus glaber TaxID=10181 RepID=UPI00034FF448) HSP 1 Score: 58.5 bits (140), Expect = 1.430e-7 Identity = 39/118 (33.05%), Postives = 49/118 (41.53%), Query Frame = 1
Query: 1 CAECRKHFLEMYEGGDNGLLEIPSKQALAAATQEARPARSYRGDVQLALWLWRTHNAVNTRLAKDSGGGVAKAEAEVEDKSLWPQAATCPQCWNGYSEAESQPPWHENNVVEFLKATY 354
C EC +HF EM AT+ ++ Q LWLWR+HNAVN+RLA +E K WP CP C + E + WHE V+ FLK Y
Sbjct: 469 CRECGQHFEEM-------------------ATESLDSVKTAD---QAVLWLWRSHNAVNSRLAGQL------SEDPKFPKVPWPTPDLCPAC---HEEIKGLDSWHEGQVLAFLKRHY 555
BLAST of mRNA_H-paniculata_contig18725.4640.1 vs. uniprot
Match: A0A6P6D7E9_OCTDE (Sulfhydryl oxidase n=1 Tax=Octodon degus TaxID=10160 RepID=A0A6P6D7E9_OCTDE) HSP 1 Score: 58.5 bits (140), Expect = 1.430e-7 Identity = 39/118 (33.05%), Postives = 47/118 (39.83%), Query Frame = 1
Query: 1 CAECRKHFLEMYEGGDNGLLEIPSKQALAAATQEARPARSYRGDVQLALWLWRTHNAVNTRLAKDSGGGVAKAEAEVEDKSLWPQAATCPQCWNGYSEAESQPPWHENNVVEFLKATY 354
C EC +HF EM + S + A Q LWLWR HNAVN+RLA +E K WP CP C + E + WHE V+ FLK Y
Sbjct: 462 CEECGQHFEEM---------AVESLDTVKTADQAV-------------LWLWRRHNAVNSRLAGQL------SEDPKFPKVPWPTPDLCPAC---HEEVKGLDSWHEGQVLAFLKQHY 548
BLAST of mRNA_H-paniculata_contig18725.4640.1 vs. uniprot
Match: A0A5N6Q2L0_9ASTR (Sulfhydryl oxidase n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6Q2L0_9ASTR) HSP 1 Score: 58.2 bits (139), Expect = 1.890e-7 Identity = 35/120 (29.17%), Postives = 47/120 (39.17%), Query Frame = 1
Query: 1 CAECRKHFLEMYEGGDNGLLEIPSKQALAAATQEARPARSYRGDVQLALWLWRTHNAVNTRLAKDSGGGVAKAEAEVEDKSLWPQAATCPQCWNG--YSEAESQPPWHENNVVEFLKATY 354
C ECR+HF M +R + S+ LWLW +HN VNTRL K K K+ WP CP C+N +E + W+ + V +FL Y
Sbjct: 353 CEECREHFYNMC----------------------SRVSSSFSSTRDFVLWLWTSHNEVNTRLKKTEES--LKTGDPKFPKTTWPTKHLCPACYNNPNQNEESNSIDWNRDEVFKFLTGYY 448
BLAST of mRNA_H-paniculata_contig18725.4640.1 vs. uniprot
Match: A0A2P6VDM8_9CHLO (Sulfhydryl oxidase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VDM8_9CHLO) HSP 1 Score: 58.2 bits (139), Expect = 2.020e-7 Identity = 39/121 (32.23%), Postives = 52/121 (42.98%), Query Frame = 1
Query: 1 CAECRKHFLEMYEGGDNGLLEIPSKQALAAATQEARPARSYRGDVQLALWLWRTHNAVNTRLAKDSGGGVAKAEAEVEDKSLWPQAATCPQCW--NGYSEAESQP-PWHENNVVEFLKATY 354
C C KHF+ A+++EA R R V LW+WRTHN VN RLA + G +KA+ +P A CP C +G A+ + PW E + FL Y
Sbjct: 377 CTACAKHFVRH------------------ASSEEAAAVRLRRDAV---LWMWRTHNIVNRRLAAEDKAGPSKADP-ASPHEQFPPAELCPGCRKADGQGPAKDEAVPWDEEEIYAFLLDYY 475
BLAST of mRNA_H-paniculata_contig18725.4640.1 vs. uniprot
Match: H0VLJ8_CAVPO (Sulfhydryl oxidase n=1 Tax=Cavia porcellus TaxID=10141 RepID=H0VLJ8_CAVPO) HSP 1 Score: 57.4 bits (137), Expect = 3.630e-7 Identity = 38/118 (32.20%), Postives = 50/118 (42.37%), Query Frame = 1
Query: 1 CAECRKHFLEMYEGGDNGLLEIPSKQALAAATQEARPARSYRGDVQLALWLWRTHNAVNTRLAKDSGGGVAKAEAEVEDKSLWPQAATCPQCWNGYSEAESQPPWHENNVVEFLKATY 354
C EC +HF +A+AA + + + + Q LWLWR HNAVN+RLA +E K WP CP C + E + WHE V+ FLK Y
Sbjct: 469 CQECGQHF-----------------EAMAAESLD-----TVKTPDQAVLWLWRRHNAVNSRLAGQL------SEDPKFPKVPWPTPDLCPAC---HEEIKGLDSWHEGQVLAFLKQHY 555
BLAST of mRNA_H-paniculata_contig18725.4640.1 vs. uniprot
Match: UPI001FB0AA0B (sulfhydryl oxidase 2-like isoform X1 n=2 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0AA0B) HSP 1 Score: 55.5 bits (132), Expect = 1.660e-6 Identity = 38/122 (31.15%), Postives = 53/122 (43.44%), Query Frame = 1
Query: 1 CAECRKHFLEMYEGGDNGLLEIPSKQALAAATQEARPARSYRGDVQLALWLWRTHNAVNTRLAK---DSGGGVAKAEAEVEDKSLWPQAATCPQCWNGYSEAESQP-PWHENNVVEFLKATY 354
C ECR+HF EM + + P ++ R +LWLW THN VN+RL + G G K K+ WP CP C+ SE ++ W+E+ V +FL Y
Sbjct: 348 CEECRQHFHEM-------------------CSSVSTPFKTTR---DFSLWLWSTHNKVNSRLMEVEESLGTGDPKFP-----KTQWPTKQLCPSCYLSSSEKKNDGVQWNEDEVFKFLVNYY 442 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18725.4640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18725.4640.1 >prot_H-paniculata_contig18725.4640.1 ID=prot_H-paniculata_contig18725.4640.1|Name=mRNA_H-paniculata_contig18725.4640.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp MYEGGDNGLLEIPSKQALAAATQEARPARSYRGDVQLALWLWRTHNAVNTback to top mRNA from alignment at H-paniculata_contig18725:1201..1554+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18725.4640.1 ID=mRNA_H-paniculata_contig18725.4640.1|Name=mRNA_H-paniculata_contig18725.4640.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=354bp|location=Sequence derived from alignment at H-paniculata_contig18725:1201..1554+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18725:1201..1554+ >mRNA_H-paniculata_contig18725.4640.1 ID=mRNA_H-paniculata_contig18725.4640.1|Name=mRNA_H-paniculata_contig18725.4640.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=648bp|location=Sequence derived from alignment at H-paniculata_contig18725:1201..1554+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |