prot_H-paniculata_contig1872.4636.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1872.4636.1
Unique Nameprot_H-paniculata_contig1872.4636.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length464
Homology
BLAST of mRNA_H-paniculata_contig1872.4636.1 vs. uniprot
Match: A0A6H5KFU2_9PHAE (Sin3a_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU2_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 9.710e-66
Identity = 132/222 (59.46%), Postives = 161/222 (72.52%), Query Frame = 0
Query:    1 MCTQELYVLMRLHHVLCERMGKAVRLAEGAKALKAQQKEHPQNPTVREGADTEEEKLSRALGMA--KSP-------------KGEALRGYDGFLALLYAFMEQPASTEHKLEEAIQLSVGNEGYMLFTLDKVIGGFLRQLKSVVEDSCSFKMLQLFKVQAAQGTFAPAKYMEECRKVFNGKMDNLYRLQWSQAGESS-------AG---GPSLLMEQIVPSN 197
            +CTQELYVLMR+HHVLC+R+GKAV+LAE AKALKA QK+HPQNP +RE  +T+EEKL R+LG+    SP             KG  LRGY GFLALLYAF +Q +++E KLE+A+QL+VGNE YMLF+ DKVI  FLRQLK VV+D  S KMLQLF+ QAA G F PA+ + ECRKV   K+DNL+RLQWS A  SS       AG   G SLL+E +VP++
Sbjct:  511 LCTQELYVLMRIHHVLCDRLGKAVKLAEDAKALKAGQKDHPQNPIIRESCETDEEKLMRSLGLGGGDSPLAFSLAPPPSSDGKGGGLRGYSGFLALLYAFTDQ-SNSELKLEDAVQLTVGNEAYMLFSYDKVINAFLRQLKLVVDDDSSLKMLQLFEHQAALGAFQPARLLSECRKVLKSKVDNLFRLQWSTAPSSSXXXXXSTAGEDEGASLLIELVVPNS 731          
BLAST of mRNA_H-paniculata_contig1872.4636.1 vs. uniprot
Match: D7G0X2_ECTSI (HDAC_interact domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X2_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 1.060e-61
Identity = 126/224 (56.25%), Postives = 156/224 (69.64%), Query Frame = 0
Query:    1 MCTQELYVLMRLHHVLCERMGKAVRLAEGAKALKAQQKEHPQNPTVREGADTEEEKLSRALGMAK--SP-------------KGEALRGYDGFLALLYAFMEQPASTEHKLEEAIQLSVGNEGYMLFTLDKVIGGFLRQLKSVVEDSCSFKMLQLFKVQAAQGTFAPAKYMEECRKVFNGKMDNLYRLQWSQA------------GESSAGGPSLLMEQIVPSN 197
            +CTQELYVLMR+HHVLC+R+GKAV+LAE AKALKA QK+HPQNP +RE  +T+EEK+ R+LG+    SP             KG  LRGY GFLALLYAF +Q +++E KLE+A+QL+VGNE YMLF+ DKVI  FLRQLK VV+D  S KMLQLF+ QAA G F PA+ + ECRKV   K+DNL+RLQWS A                    SLL+E +VP++
Sbjct:  915 LCTQELYVLMRIHHVLCDRLGKAVKLAEDAKALKAGQKDHPQNPIIRESCETDEEKVMRSLGLGVGGSPPASSGAXXXSSHGKGGGLRGYSGFLALLYAFTDQ-SNSELKLEDAVQLTVGNEAYMLFSYDKVINAFLRQLKLVVDDDSSLKMLQLFEHQAALGAFQPARLLSECRKVLKSKVDNLFRLQWSTAPXXXXXXXXXXXXXXXXXXASLLIELVVPNS 1137          
BLAST of mRNA_H-paniculata_contig1872.4636.1 vs. uniprot
Match: A0A7S2D3V2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D3V2_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.750e-11
Identity = 55/184 (29.89%), Postives = 95/184 (51.63%), Query Frame = 0
Query:    3 TQELYVLMRLHHVLCERMGKAVRLAEGAKALKAQQKEHPQNPTVREGADTEEEKLSRALGMAKSPKGEALR----------GYDGFLALLYAFMEQPASTEHKLEEAIQLSVGNEGYMLFTLDKVIGGFLRQLKSVVEDSCSFKMLQLFKVQAAQGT-FAPAKYMEECRKVFNGKMDNLYRLQW 175
            TQ LYV +RLH +L +R+ +A  L+E  +   A + EHP    V+E    +EEK+++A G  +    ++L           GY GF  LLYA +      +   E+  +  +G++ Y L T+DK+IG  ++ L+ +V D    K+  L++ + +Q T   PA+Y+   + +       L+R Q+
Sbjct:   69 TQTLYVFLRLHEMLYQRLCQAKELSEAGRGPGAIE-EHPVKALVKEDR-VDEEKMTQA-GEDEGTSSDSLEEEDVKPHLKNGYKGFRWLLYAMLSGDLELQ-AYEDYCRQMIGSDSYRLCTMDKLIGSVVKTLQQLVHDKSFTKLAALYQWERSQPTGLCPARYLCHTKHLLKRSPTELFRAQY 248          
BLAST of mRNA_H-paniculata_contig1872.4636.1 vs. uniprot
Match: D7G470_ECTSI (HDAC_interact domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G470_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 8.090e-11
Identity = 57/195 (29.23%), Postives = 94/195 (48.21%), Query Frame = 0
Query:    3 TQELYVLMRLHHVLCERMGKAVRLAEGAKALKAQQKEHPQNPTVREGADTEEEKLSRALGMAKSPKGEALRGYDGFLALLYAFMEQPASTEHKLEEAIQLSVGNEGYMLFTLDKVIGGFLRQLKSVVEDSCSFKMLQLFKVQAAQGT--FAPAKYMEECRKVFNGKMDNLYRLQWSQAGESSAGG----PSLLME 191
            T + Y+++R+HH+L ER+ +A +L   A   +      PQ   +R  A          +  A   K E   GY  FL  LY  +E+  +TE + EE ++  VGN+GY+L +LDK++ G L+ L     D    K+ QL+  +    T    PA Y    +++ +     + R+Q+    +  +GG    P+L ME
Sbjct: 1001 TTDFYLVLRMHHLLAERLAEAKKLCSEAGLSRQTVVASPQE-VLRASAGV----TGTGMHAANGDKEEI--GYKTFLGHLYDLLEEKINTE-RYEEGVRQLVGNQGYVLCSLDKLVVGLLQNLYRASADKVFHKLTQLYYYERTTQTEGVVPAIYRGHVQELLSRSEKEVVRVQYHPGAQKPSGGWLLEPALKME 1187          
BLAST of mRNA_H-paniculata_contig1872.4636.1 vs. uniprot
Match: A0A7S1BCU2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCU2_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 4.770e-10
Identity = 53/181 (29.28%), Postives = 95/181 (52.49%), Query Frame = 0
Query:    3 TQELYVLMRLHHVLCERMGKAVRLAEGAKALKAQQKEHPQNPTVREGADTEEEKLSRALGMAKSPKGEALRGYDGFLALLYAFME-QPASTEH-KLEEAIQLSVGNEGYMLFTLDKVIGGFLRQLKSVVEDSCSFKMLQLFKVQAAQGTFAPAKYMEECRKVFNGKMDNLYRLQWSQAGES 181
            TQ LY+ +RLHH+L ER+ KA   AEG        +     P +  G  +  EK  R L   ++  G+    YD +L++LY  ++   AS E+ + EE ++  +GN+   L+T+DK+I   L+ L+++  D    +M+Q+++  A  G F P  + +E   +     D++Y  Q+ +  ++
Sbjct:  299 TQSLYLFLRLHHLLVERLAKARSYAEGRGG-----EVQVVTPGLALGTASPVEK--RLLEDTRTEYGQ--ERYDAYLSILYGLVDGHNASGENLRYEEKVRSLLGNDSCELYTMDKLINHTLKHLQAMSSDETFSQMVQVYRRHAKTGVFKPTAFRQEIATL---SYDDVYAFQFCKVKDA 467          
BLAST of mRNA_H-paniculata_contig1872.4636.1 vs. uniprot
Match: A0A7S1BBZ8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BBZ8_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 6.550e-10
Identity = 53/181 (29.28%), Postives = 95/181 (52.49%), Query Frame = 0
Query:    3 TQELYVLMRLHHVLCERMGKAVRLAEGAKALKAQQKEHPQNPTVREGADTEEEKLSRALGMAKSPKGEALRGYDGFLALLYAFME-QPASTEH-KLEEAIQLSVGNEGYMLFTLDKVIGGFLRQLKSVVEDSCSFKMLQLFKVQAAQGTFAPAKYMEECRKVFNGKMDNLYRLQWSQAGES 181
            TQ LY+ +RLHH+L ER+ KA   AEG        +     P +  G  +  EK  R L   ++  G+    YD +L++LY  ++   AS E+ + EE ++  +GN+   L+T+DK+I   L+ L+++  D    +M+Q+++  A  G F P  + +E   +     D++Y  Q+ +  ++
Sbjct:  588 TQSLYLFLRLHHLLVERLAKARSYAEGRGG-----EVQVVTPGLALGTASPVEK--RLLEDTRTEYGQ--ERYDAYLSILYGLVDGHNASGENLRYEEKVRSLLGNDSCELYTMDKLINHTLKHLQAMSSDETFSQMVQVYRRHAKTGVFKPTAFRQEIATL---SYDDVYAFQFCKVKDA 756          
BLAST of mRNA_H-paniculata_contig1872.4636.1 vs. uniprot
Match: A0A565B3B8_9BRAS (HDAC_interact domain-containing protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565B3B8_9BRAS)

HSP 1 Score: 72.4 bits (176), Expect = 1.040e-9
Identity = 54/194 (27.84%), Postives = 91/194 (46.91%), Query Frame = 0
Query:    5 ELYVLMRLHHVLCERMGKAVRLAEGAKALKAQQKEHPQNPTVREGADTEEEKLSRALGMAKSPKGEALRGYDGFLALLYAFMEQPASTEHKLEEAIQLSVGNEGYMLFTLDKVIGGFLRQLKSVVEDSCSFKMLQLFKVQAAQ--GTFAPAKYMEECRKVFNGKMDNLYRLQWSQAGESSAGGPSLLMEQIVPS 196
            + YVL RLH +L ER+  A R   G++                             L    S   +++  Y  F  +LY  ++  A    K E+  +  +GN+ Y+LFTLDK+I   ++QL+++V D    K+LQL++ + ++  G    + Y E  R + +   +N+YRL+WS +       PS L  Q++ S
Sbjct: 1101 DFYVLFRLHQILYERILSAKRNCSGSE-----------------------------LESKSSKDTDSVDPYARFTRVLYGLLDGSADNT-KFEDECRAIIGNQSYVLFTLDKLIYKLVKQLQAIVADDMDNKLLQLYEYEKSRKSGKVIDSVYYENARVLLH--EENIYRLEWSSS-------PSRLSIQLMDS 1255          
BLAST of mRNA_H-paniculata_contig1872.4636.1 vs. uniprot
Match: A0A540L7I1_MALBA (HDAC_interact domain-containing protein n=3 Tax=Malus TaxID=3749 RepID=A0A540L7I1_MALBA)

HSP 1 Score: 70.5 bits (171), Expect = 4.290e-9
Identity = 55/192 (28.65%), Postives = 90/192 (46.88%), Query Frame = 0
Query:    7 YVLMRLHHVLCERMGKAVRLAEGAKALKAQQKEHPQNPTVREGADTEEEKLSRALGMAKSPKGEALRGYDGFLALLYAFMEQPASTEHKLEEAIQLSVGNEGYMLFTLDKVIGGFLRQLKSVVEDSCSFKMLQLFKVQAAQ--GTFAPAKYMEECRKVFNGKMDNLYRLQWSQAGESSAGGPSLLMEQIVPS 196
            YVL RLH +L ER+  A   + GA+                             +    S  G +   YD F++ LY  ++       K E+  +  +GN+ Y+LFTLDK+I  F++QL++V  D    K+LQL++ + ++  G    + Y E  R + +   +N+YRL++S A       PS L  Q++ S
Sbjct: 1191 YVLYRLHQILYERILSAKTSSTGAE-----------------------------MKWRTSKDGSSPDLYDRFMSALYNLLDGSVDNA-KFEDECRAIIGNQSYILFTLDKLIYKFVKQLQTVASDETDNKLLQLYEYEKSRKTGKLIDSVYHENARVLIH--EENIYRLEFSSA-------PSRLSIQLMDS 1343          
BLAST of mRNA_H-paniculata_contig1872.4636.1 vs. uniprot
Match: UPI000901703E (paired amphipathic helix protein Sin3-like 1 n=4 Tax=Camelina sativa TaxID=90675 RepID=UPI000901703E)

HSP 1 Score: 69.7 bits (169), Expect = 7.370e-9
Identity = 55/194 (28.35%), Postives = 93/194 (47.94%), Query Frame = 0
Query:    5 ELYVLMRLHHVLCERMGKAVRLAEGAKALKAQQKEHPQNPTVREGADTEEEKLSRALGMAKSPKGEALRGYDGFLALLYAFMEQPASTEHKLEEAIQLSVGNEGYMLFTLDKVIGGFLRQLKSVVEDSCSFKMLQLFKVQAAQ--GTFAPAKYMEECRKVFNGKMDNLYRLQWSQAGESSAGGPSLLMEQIVPS 196
            + YVL RLH +L +R+  A R   G + LK++  + P                             +L  Y  F+ +LY  ++  A    K E+  +  +GN+ YMLFTLDK+I   ++QL+++V D    K+LQL++ + ++  G    + Y E  R + +   +N+YRL+ S +       PS L  Q++ S
Sbjct: 1110 DFYVLFRLHQILYQRILSAKRNCSGGE-LKSKNSKDP----------------------------NSLDPYARFMKVLYGLLDGSAENS-KFEDECRAIIGNQSYMLFTLDKLIYKLVKQLQAIVADEMDNKLLQLYEYEKSRKPGRVIDSVYYENARVLLH--EENVYRLECSSS-------PSRLSIQLMDS 1264          
BLAST of mRNA_H-paniculata_contig1872.4636.1 vs. uniprot
Match: A0A251Q6F9_PRUPE (HDAC_interact domain-containing protein n=12 Tax=Prunus TaxID=3754 RepID=A0A251Q6F9_PRUPE)

HSP 1 Score: 68.2 bits (165), Expect = 2.250e-8
Identity = 54/192 (28.12%), Postives = 93/192 (48.44%), Query Frame = 0
Query:    7 YVLMRLHHVLCERMGKAVRLAEGAKALKAQQKEHPQNPTVREGADTEEEKLSRALGMAKSPKGEALRGYDGFLALLYAFMEQPASTEHKLEEAIQLSVGNEGYMLFTLDKVIGGFLRQLKSVVEDSCSFKMLQLFKVQAAQGT--FAPAKYMEECRKVFNGKMDNLYRLQWSQAGESSAGGPSLLMEQIVPS 196
            YVL RLH +L ER+  A   + GA+ +K +  +   +P +                            Y  F++ LY+ ++  A    K E+  +  +GN+ Y+LFTLDK+I  F++QL++V  D    K+LQL++ + ++ T     + Y E  R + +   +N+YRL++  A       PS L  Q++ S
Sbjct: 1122 YVLYRLHQILYERISSAKTSSTGAE-MKWRSSKDSSSPDL----------------------------YARFMSALYSLLDGSADNA-KFEDECRAIIGNQSYILFTLDKLIYKFVKQLQAVAADEMDNKLLQLYEYEKSRKTEKLIDSVYYENARVLLH--EENIYRLEFFSA-------PSRLSIQLMDS 1274          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1872.4636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFU2_9PHAE9.710e-6659.46Sin3a_C domain-containing protein n=1 Tax=Ectocarp... [more]
D7G0X2_ECTSI1.060e-6156.25HDAC_interact domain-containing protein n=1 Tax=Ec... [more]
A0A7S2D3V2_9STRA1.750e-1129.89Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
D7G470_ECTSI8.090e-1129.23HDAC_interact domain-containing protein n=2 Tax=Ec... [more]
A0A7S1BCU2_9STRA4.770e-1029.28Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S1BBZ8_9STRA6.550e-1029.28Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A565B3B8_9BRAS1.040e-927.84HDAC_interact domain-containing protein n=1 Tax=Ar... [more]
A0A540L7I1_MALBA4.290e-928.65HDAC_interact domain-containing protein n=3 Tax=Ma... [more]
UPI000901703E7.370e-928.35paired amphipathic helix protein Sin3-like 1 n=4 T... [more]
A0A251Q6F9_PRUPE2.250e-828.13HDAC_interact domain-containing protein n=12 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031693Sin3, C-terminalPFAMPF16879Sin3a_Ccoord: 2..178
e-value: 3.8E-23
score: 82.6
IPR039774Transcriptional regulatory protein Sin3-likePANTHERPTHR12346SIN3B-RELATEDcoord: 2..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1872contigH-paniculata_contig1872:1552..8980 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1872.4636.1mRNA_H-paniculata_contig1872.4636.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1872 1488..9538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1872.4636.1 ID=prot_H-paniculata_contig1872.4636.1|Name=mRNA_H-paniculata_contig1872.4636.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=464bp
MCTQELYVLMRLHHVLCERMGKAVRLAEGAKALKAQQKEHPQNPTVREGA
DTEEEKLSRALGMAKSPKGEALRGYDGFLALLYAFMEQPASTEHKLEEAI
QLSVGNEGYMLFTLDKVIGGFLRQLKSVVEDSCSFKMLQLFKVQAAQGTF
APAKYMEECRKVFNGKMDNLYRLQWSQAGESSAGGPSLLMEQIVPSNGNS
HSSSKQSAAAAASGNVFPTVERALETTARPIETAAMGAEEGKAKSDFPTL
PLSAAGAAPKATGPTTSESSLSSSSSPPPAKAPPSSISAVAAASLSYPSS
SSSSPPCSNNTNSSSKPSATGDNPMKDRDKDSGKGAGVAGAVSSSSASAV
ASSSPANRAVSPAVGAVAGASDESTASGAAMAAFASAKPLPVGPPVPPPA
GVGLAGGGGGDIGLSAEARSLSLKRGPSASGEGHSDAAAANGSEEDGGDL
RGEEKAKKRRKED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031693Sin3_C
IPR039774Sin3-like