prot_H-paniculata_contig18711.4634.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18711.4634.1
Unique Nameprot_H-paniculata_contig18711.4634.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length58
Homology
BLAST of mRNA_H-paniculata_contig18711.4634.1 vs. uniprot
Match: A0A0D2M0U8_9CHLO (Isoleucyl-tRNA synthetase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2M0U8_9CHLO)

HSP 1 Score: 99.8 bits (247), Expect = 6.590e-25
Identity = 43/57 (75.44%), Postives = 49/57 (85.96%), Query Frame = 0
Query:    2 RANAVVREPELQAYWQQERIYEQLAERNTGEKYVLHDGPPYANGDLHMGHAMNKVTK 58
            RAN+VVREPE+Q+YW Q R+YE LAE NTGE Y LHDGPPYANGDLH GHA+NK+ K
Sbjct:   64 RANSVVREPEIQSYWAQNRVYESLAETNTGEPYTLHDGPPYANGDLHTGHALNKILK 120          
BLAST of mRNA_H-paniculata_contig18711.4634.1 vs. uniprot
Match: A0A835YNF4_9STRA (Isoleucine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNF4_9STRA)

HSP 1 Score: 101 bits (252), Expect = 9.950e-24
Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = 0
Query:    1 QRANAVVREPELQAYWQQERIYEQLAERNTGEKYVLHDGPPYANGDLHMGHAMNKVTK 58
            QRANAVVREPELQ YW + R+YEQLAE N G+ YVLHDGPPYANGDLH+GHA+NK+ K
Sbjct:   52 QRANAVVREPELQQYWAENRVYEQLAESNPGDVYVLHDGPPYANGDLHIGHALNKILK 109          
BLAST of mRNA_H-paniculata_contig18711.4634.1 vs. uniprot
Match: A0A6H5L2M1_9PHAE (Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2M1_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.850e-23
Identity = 44/58 (75.86%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 QRANAVVREPELQAYWQQERIYEQLAERNTGEKYVLHDGPPYANGDLHMGHAMNKVTK 58
            QRANAV REPELQA+W +ERIYE++ + NTGEK+VLHDGPPYANGDLH+GHA+NK+ K
Sbjct:  121 QRANAVKREPELQAFWDEERIYERVLDDNTGEKFVLHDGPPYANGDLHIGHALNKILK 178          
BLAST of mRNA_H-paniculata_contig18711.4634.1 vs. uniprot
Match: B4WPD1_SYNS7 (Isoleucine--tRNA ligase n=4 Tax=Cyanobacteria TaxID=1117 RepID=B4WPD1_SYNS7)

HSP 1 Score: 100 bits (249), Expect = 2.530e-23
Identity = 43/57 (75.44%), Postives = 52/57 (91.23%), Query Frame = 0
Query:    2 RANAVVREPELQAYWQQERIYEQLAERNTGEKYVLHDGPPYANGDLHMGHAMNKVTK 58
            RANAV REPELQAYWQ+++IYE LA++N GE ++LHDGPPYANGDLHMGHA+NK+ K
Sbjct:   10 RANAVKREPELQAYWQEKKIYETLAQKNPGEPFILHDGPPYANGDLHMGHALNKILK 66          
BLAST of mRNA_H-paniculata_contig18711.4634.1 vs. uniprot
Match: A0A087SEW6_AUXPR (Isoleucine-tRNA ligase n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SEW6_AUXPR)

HSP 1 Score: 92.0 bits (227), Expect = 3.250e-23
Identity = 37/57 (64.91%), Postives = 50/57 (87.72%), Query Frame = 0
Query:    2 RANAVVREPELQAYWQQERIYEQLAERNTGEKYVLHDGPPYANGDLHMGHAMNKVTK 58
            RAN+VVREP++QA+W+++ +Y++L+  N GE Y LHDGPPYANGDLHMGHA+NK+ K
Sbjct:    2 RANSVVREPQIQAFWEEKGVYQKLSRNNPGEVYTLHDGPPYANGDLHMGHALNKILK 58          
BLAST of mRNA_H-paniculata_contig18711.4634.1 vs. uniprot
Match: A0A6P0X3V6_9CYAN (Class I tRNA ligase family protein (Fragment) n=1 Tax=Caldora sp. SIO3E6 TaxID=2607806 RepID=A0A6P0X3V6_9CYAN)

HSP 1 Score: 92.8 bits (229), Expect = 4.240e-23
Identity = 40/57 (70.18%), Postives = 50/57 (87.72%), Query Frame = 0
Query:    2 RANAVVREPELQAYWQQERIYEQLAERNTGEKYVLHDGPPYANGDLHMGHAMNKVTK 58
            RANAV REPELQ YW++++IY++L++ N GE +VLHDGPPYANG LHMGHA+NKV K
Sbjct:   21 RANAVKREPELQKYWEEQQIYDRLSQNNPGEIFVLHDGPPYANGSLHMGHALNKVLK 77          
BLAST of mRNA_H-paniculata_contig18711.4634.1 vs. uniprot
Match: A0A6T8JN82_HEMAN (Isoleucine--tRNA ligase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8JN82_HEMAN)

HSP 1 Score: 99.4 bits (246), Expect = 6.440e-23
Identity = 43/58 (74.14%), Postives = 52/58 (89.66%), Query Frame = 0
Query:    1 QRANAVVREPELQAYWQQERIYEQLAERNTGEKYVLHDGPPYANGDLHMGHAMNKVTK 58
            QRANAVVREPELQA+W+ E++YE+  E NTG K+VLHDGPPYANGDLH+GHA+NK+ K
Sbjct:  114 QRANAVVREPELQAFWKDEKVYEKAYEDNTGSKFVLHDGPPYANGDLHIGHALNKILK 171          
BLAST of mRNA_H-paniculata_contig18711.4634.1 vs. uniprot
Match: A0A7S1TNG1_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TNG1_9RHOD)

HSP 1 Score: 92.0 bits (227), Expect = 6.850e-23
Identity = 42/58 (72.41%), Postives = 49/58 (84.48%), Query Frame = 0
Query:    1 QRANAVVREPELQAYWQQERIYEQLAERNTGEKYVLHDGPPYANGDLHMGHAMNKVTK 58
            QRANAV REPELQA W++  +YE+L+  N GEK+VLHDGPPYANG LHMGHA+NKV K
Sbjct:   48 QRANAVSREPELQALWEKLGVYEKLSRNNPGEKFVLHDGPPYANGALHMGHALNKVLK 105          
BLAST of mRNA_H-paniculata_contig18711.4634.1 vs. uniprot
Match: UPI001F0A339D (isoleucine--tRNA ligase n=1 Tax=Leptolyngbya sp. BC1307 TaxID=2029589 RepID=UPI001F0A339D)

HSP 1 Score: 98.2 bits (243), Expect = 1.640e-22
Identity = 41/57 (71.93%), Postives = 51/57 (89.47%), Query Frame = 0
Query:    2 RANAVVREPELQAYWQQERIYEQLAERNTGEKYVLHDGPPYANGDLHMGHAMNKVTK 58
            RANA+ REPELQAYWQ++ +YE+LAE N G+ ++LHDGPPYANGDLHMGHA+NK+ K
Sbjct:    2 RANAIKREPELQAYWQEKALYERLAEENPGDPFILHDGPPYANGDLHMGHALNKILK 58          
BLAST of mRNA_H-paniculata_contig18711.4634.1 vs. uniprot
Match: A0A7S2RFV7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFV7_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.960e-22
Identity = 40/58 (68.97%), Postives = 47/58 (81.03%), Query Frame = 0
Query:    1 QRANAVVREPELQAYWQQERIYEQLAERNTGEKYVLHDGPPYANGDLHMGHAMNKVTK 58
            QRANAVVREPE+QA+W  E IYE   + NTG  + LHDGPPYANGDLH+GHA+NK+ K
Sbjct:    9 QRANAVVREPEIQAFWDTEGIYEAAFKENTGPTFTLHDGPPYANGDLHIGHALNKILK 66          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18711.4634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2M0U8_9CHLO6.590e-2575.44Isoleucyl-tRNA synthetase n=1 Tax=Monoraphidium ne... [more]
A0A835YNF4_9STRA9.950e-2477.59Isoleucine--tRNA ligase n=1 Tax=Tribonema minus Ta... [more]
A0A6H5L2M1_9PHAE1.850e-2375.86Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2... [more]
B4WPD1_SYNS72.530e-2375.44Isoleucine--tRNA ligase n=4 Tax=Cyanobacteria TaxI... [more]
A0A087SEW6_AUXPR3.250e-2364.91Isoleucine-tRNA ligase n=1 Tax=Auxenochlorella pro... [more]
A0A6P0X3V6_9CYAN4.240e-2370.18Class I tRNA ligase family protein (Fragment) n=1 ... [more]
A0A6T8JN82_HEMAN6.440e-2374.14Isoleucine--tRNA ligase n=1 Tax=Hemiselmis anderse... [more]
A0A7S1TNG1_9RHOD6.850e-2372.41Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
UPI001F0A339D1.640e-2271.93isoleucine--tRNA ligase n=1 Tax=Leptolyngbya sp. B... [more]
A0A7S2RFV7_9STRA1.960e-2268.97Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002300Aminoacyl-tRNA synthetase, class IaPFAMPF00133tRNA-synt_1coord: 13..56
e-value: 8.3E-12
score: 44.1
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 9..58
e-value: 1.1E-17
score: 65.6
NoneNo IPR availablePANTHERPTHR42765:SF3coord: 2..58
NoneNo IPR availablePANTHERPTHR42765FAMILY NOT NAMEDcoord: 2..58
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 2..57
IPR001412Aminoacyl-tRNA synthetase, class I, conserved sitePROSITEPS00178AA_TRNA_LIGASE_Icoord: 41..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18711contigH-paniculata_contig18711:4578..4751 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18711.4634.1mRNA_H-paniculata_contig18711.4634.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18711 4578..4751 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18711.4634.1 ID=prot_H-paniculata_contig18711.4634.1|Name=mRNA_H-paniculata_contig18711.4634.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=58bp
QRANAVVREPELQAYWQQERIYEQLAERNTGEKYVLHDGPPYANGDLHMG
HAMNKVTK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002300aa-tRNA-synth_Ia
IPR014729Rossmann-like_a/b/a_fold
IPR001412aa-tRNA-synth_I_CS