mRNA_H-paniculata_contig187.4630.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig187.4630.1 vs. uniprot
Match: A0A6H5KRG7_9PHAE (GP-PDE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRG7_9PHAE) HSP 1 Score: 633 bits (1633), Expect = 3.790e-210 Identity = 353/619 (57.03%), Postives = 418/619 (67.53%), Query Frame = 3
Query: 396 ATQLPEELMSSVLVFLRMRDLLGWRLVATSTKTMWATENHVSHVARRLSADLYNTRDKLKAITLLAPGPSLGGTKPVANRDLPRSKWKKCLNIGHKGAHGHVEGNTMASFHKAVQMGVDMIEFDVLTTQDRVVVCHHDPLIEDTGEWIENLTLSQTRKRLKNHAVPTLEDMLRDQTLLQSGVHLYVDMKHTEIVRAVLAAVKQAVDGWGWTADRFVIAGFRQLDLLQVNAHRQAFPELAKLRTACITDGFPLTLARDFEALKVDALSTGKDHVSPDLVADCQRRGIQVWAWTVNNVHFMKRLMKMGVDGICTDYPELVHEANKKFRPQQQHHQQVKASGGRSAXAGSSAPASAPASFISPVEEEPLEADKLHGPATAPTSSHSVTTSDNMNDAGGEDQSDIPAAASTATIGIPMP------------TALLASCDMDTQALGGWYERSPSQHCHRKCPRKAEGDRAGEEDTVGGGCGRDPPATQYSDEERLWIAVYGDLSGVRDFSVAAVHEAKVFLKACSGAAAVEAFMSRQHITSQTVPRELEGVALLCEEAETEAQQALRPVVSSAETFQWSVDLISTKEGGEFLANLQKSMARDDEPQPMLSFEKAFVSDLFGMV 2216
A LPEELMSSVLVFLRM+D+L WR+V++STK MWA+E+ VS VARR+S DL+ T KLKAI+LLAP P L GT+PVANRD+ SKW K LNIGHKGA GHVEGNTM SF +AV++GVD+IEFDVLTT D VV+CHHDPLIE++GEWIENLTL+QTR+RLK H V T E+ML+++ L +SGVHLY+DMKHTEIVR VL AV QAVD WGWTADR V+A FRQLDLLQVNA+RQA PELA LRTACI DG PLTLARDF+ALKVD LSTGKDHVSPDLVADCQRRGIQVW WTVN++HFM+RL+KMGVDG+CTDYP LVHE+N++ RPQ A + A+F P L G A AP SS D+ G + S + + + T A D LGGWY R + C AEG SD++RL A+YGDL+GVRDF+V V +AKV +K CS A AVE+F++ + + REL L +EAET A+Q LRP VSSAETF+WSVDLIST +G EF++ L +SM RD E PML FEKAFV DL GMV
Sbjct: 28 AMPLPEELMSSVLVFLRMKDMLQWRVVSSSTKAMWASESQVSRVARRVSVDLHLTLSKLKAISLLAPSPRLDGTQPVANRDVHSSKWGKALNIGHKGAAGHVEGNTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEESGEWIENLTLAQTRERLK-HNVSTFEEMLQEKVLSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAYRQAIPELANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPGLVHESNRRLRPQ--------------------ASQTDAATFPFPQGPGAYSGVDLRGLA-APASSEGKAVGSTALDSDGNNSSSTASMSGSXXXXXXXXXXXXXXXXXXXXTTNKAEDSTDATVLGGWYSRCDT------CEESAEG----------------------SDQQRLIAALYGDLAGVRDFAVRTVEDAKVLVKVCSRAVAVESFLAGDAMKGKRATRELAAATALSKEAETLAEQTLRPFVSSAETFKWSVDLISTAQGREFMSQLTRSMKRD-EVLPMLPFEKAFVKDLLGMV 595
BLAST of mRNA_H-paniculata_contig187.4630.1 vs. uniprot
Match: A0A835YQF6_9STRA (PLC-like phosphodiesterase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF6_9STRA) HSP 1 Score: 298 bits (763), Expect = 1.870e-87 Identity = 155/334 (46.41%), Postives = 216/334 (64.67%), Query Frame = 3
Query: 405 LPEELMSSVLVFLRMRDLLGWRLVATSTKT-----------MWATENHVSHVARRLSADLYNTRDKLKAITLLA-----PGPSLGGTKPVANRDLPRSKWKKCLNIGHKGAHGHVEGNTMASFHKAVQMGVDMIEFDVLTTQDRVVVCHHDPLIEDTGEWIENLTLSQTRKRLKNHAVPTLEDMLRDQTLLQSGVHLYVDMKHTEIVRAVLAAVKQAVDGWGWTADRFVIAGFRQLDLLQVNAHRQAFPELAKLRTACITDGFPLTLARDFEALKVDALSTGKDHVSPDLVADCQRRGIQVWAWTVNNVHFMKRLMKMGVDGICTDYPELVHEA 1358
L +L + L++L R LL W V+ + + ++A++ H +RL +L++++D L ++ LA P P T A P K+ LNIGHKGA GHV+GNT+ SFH+AV++GVDMIEFDV+ D ++ CHHDPL E +G+W +++T+++ R L PTL++ML D+ L SGVHLY D+KHT IVR + ++ AV GW A RFV+A F+Q++LL++NA RQA PEL LRTA I D PL+LARDFEAL A+S G+ V P+ VADC RRG+++WAWTVN+ + L ++G+DGICTDYPELVH A
Sbjct: 1 LHADLQGACLLYLDTRSLLRWAAVSRGSFSTGSSSNRNFNGIFASQGHAQRHIQRLLLELHHSKDHLHHVSQLAGHSIKPAPPAWATAAGATATPP----KRVLNIGHKGAEGHVKGNTLDSFHRAVELGVDMIEFDVVACADGIL-CHHDPLHEASGKWYQDMTIAKVRSLL-GRPHPTLDEMLADRRLRDSGVHLYFDLKHTNIVRPTMRSIVAAVTRGGWHASRFVVATFKQVELLEINAFRQAIPELRGLRTAAILDAIPLSLARDFEALGCCAVSVGQYCVCPEFVADCHRRGLEMWAWTVNHKSMVDELFRLGIDGICTDYPELVHAA 328
BLAST of mRNA_H-paniculata_contig187.4630.1 vs. uniprot
Match: A0A4D9D615_9STRA (GP-PDE domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D615_9STRA) HSP 1 Score: 190 bits (483), Expect = 7.020e-47 Identity = 120/340 (35.29%), Postives = 180/340 (52.94%), Query Frame = 3
Query: 405 LPEELMSSVLVFLRMRDLLGWRLVATSTKTMWATENHVSHVARRLSADLYNTRDKLK-AITLLAPG--PSLGGTKPVAN--RDLPRSKWK---------------------KCLNIGHKGAHGHVEGNTMASFHKAVQMGVDMIEFDVLTTQDRVVVCHHDPLIEDTGEWIENLTLSQTRKRLKNHAVPTLEDMLRDQTLLQSGVHLYVDMKHTEIVRAVLAAVKQAVDGWGWTADRFVIAGFRQLDLLQVNAHRQAFPE-LAKLRTACITDGFPLTLARDFEALKVDALSTGKDHVSPDLVADCQRRGIQVWAWTVNNVHFMKRLMKMGVDGICTDYPE 1343
+P +LM + L LL R + + EN V++RL+ +L+ +R +L+ A + P PS G + + D + W + L++GH+GA GHV+GN++ASF +AV +G DMIE DV + V+ HHD + D G +ENL L+Q ++ + AV L +L D L SGV LY+D+K +V ++ + +A+ GW R ++A F Q D+++VNAHR A+P LA L+T I DG P++ A+++ AL V S G V P + D RRGI V WTVNN M+R +GVD + TD+PE
Sbjct: 38 MPPKLMGLLYSLLPTSSLLALRCCSKGHLVRFHAENIWEPVSKRLTVELHASRLRLETASDVCGPPQPPSADGDEDDTDVGEDTDLAGWTHDPSRFRGHPHLFQTPPRLVPRPLSVGHRGASGHVKGNSLASFQRAVALGADMIELDVCLDRSGEVIVHHDRYLPD-GRLLENLALAQIKR--VDPAVEPLSRVLAD--LRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVNNASAMRRYADLGVDALVTDFPE 372
BLAST of mRNA_H-paniculata_contig187.4630.1 vs. uniprot
Match: A0A6V1WIB7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WIB7_HETAK) HSP 1 Score: 181 bits (460), Expect = 2.840e-45 Identity = 106/312 (33.97%), Postives = 163/312 (52.24%), Query Frame = 3
Query: 405 LPEELMSSVLVFLRMRDLLGWRLVATSTKTMWATENHVSHVARRLSADLYNTRDKLKAITLLAPGPSLGGTKPVANRDLPRSKWKKCLNIGHKGAHGHVEGNTMASFHKAVQMGVDMIEFDVLTTQDRVVVCHHDPLIEDTGEWIENLTLSQTRKRLKNHAVPTLEDMLRDQTLLQSGVHLYVDMKHTEIVRAVLAAVKQAVDGWGWTADRFVIAGFRQLDLLQVNAHRQAFPELAKLRTACITDGFPLTLARDFEALKVDALSTGKDHVSPDLVADCQRRGIQVWAWTVNNVHFMKRLMKMGVDGICTDYP 1340
L E S V FL + +L RLV +++A+E+H V +++ +L K++ L + + A D + + K + I HKG GNTM +F ++V++G +MIE D++ T+DR ++ HHD D +S+ R++ +PTL + L + L +S + +Y D+K +IV +L + +AV W A RF+IA F Q DLL VNA + A +T I D PL A FE L+V +S + + P V D RRG+ V+AWTVN+ + ++MGVDGICTD P
Sbjct: 8 LDGESTSRVFKFLNLSELFKCRLVCRRLTSLFASEHHAKSVLQKVECELGKATYKVRTEGRLHDS-TYQSSLAKAKADKGTNVYHKTITICHKGCSSKFHGNTMPAFKESVRIGAEMIELDLILTRDRNIIIHHDQTTPDGEGLCFETPMSEIRRKFPE--IPTLREFLENDMLRKSDIRIYFDLKCQDIVEPLLELLMEAVHRLQWEASRFLIASFDQYDLLDVNAFKSAHD--VDFQTIVIVDAMPLGYAACFEELEVAYISIAQGRLIPAFVQDAHRRGMGVFAWTVNDPVLWRAFVRMGVDGICTDRP 314
BLAST of mRNA_H-paniculata_contig187.4630.1 vs. uniprot
Match: W7T4I9_9STRA (Glycerophosphoryl diester phosphodiesterase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4I9_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.360e-28 Identity = 72/180 (40.00%), Postives = 103/180 (57.22%), Query Frame = 3
Query: 753 MIEFDVLTTQDRVVVCHHDPLIEDTGEWIENLTLSQTRKRLKNHAVPTLEDMLRDQTLLQSGVHLYVDMKHTEIVRAVLAAVKQAVDGWGWTADRFVIAGFRQLDLLQVNAHRQAFPE-LAKLRTACITDGFPLTLARDFEALKVDALSTGKDHVSPDLVADCQRRGIQVWAWTVNNVHF 1289
MIE DV + V+ HHD + D G +ENL L+Q ++ + AV L +L D L SGV LY+D+K +V ++ + +A+ GW R ++A F Q D+++VNAHR A+P LA L+T I DG P++ A+++ AL V S G V P + D RRGI V WTVNN +
Sbjct: 1 MIELDVCLDRSGEVIVHHDRYLPD-GRLLENLALAQIKR--VDPAVEPLARVLAD--LRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVNNARW 175
BLAST of mRNA_H-paniculata_contig187.4630.1 vs. uniprot
Match: A0A0S8IH52_9BACT (GP-PDE domain-containing protein n=1 Tax=Omnitrophica WOR_2 bacterium SM23_72 TaxID=1703777 RepID=A0A0S8IH52_9BACT) HSP 1 Score: 122 bits (306), Expect = 1.620e-27 Identity = 70/234 (29.91%), Postives = 126/234 (53.85%), Query Frame = 3
Query: 666 LNIGHKGAHGHVEGNTMASFHKAVQMGVDMIEFDVLTTQDRVVVCHHDPLIE----DTGEWIENLTLSQTRKRL--KNHAVPTLEDMLRDQTLLQSGVHLYVDMKHTEIVRAVLAAVKQAVDGWGWTADRFVIAGFRQLDLLQVNAHRQAFPELAKLRTACITDGFPLTLARDFEALKVDALSTGKDHVSPDLVADCQRRGIQVWAWTVNNVHFMKRLMKMGVDGICTDYPELV 1349
L IGH+GA G+ NT+ SF KA+++ VDMIEFDV + VV HD +++ DTG ++ N TL + + K + TLE+ L + V + +++K + AV +K+ V+ GW+ D F+++ F +LL+ N ++++ + G P+ A + +L K+ ++ L+ D +RG++V+ +T N ++++ MGVDGI +D+P+ +
Sbjct: 3 LRIGHRGARGYEPENTILSFKKALELNVDMIEFDVCICKTGEVVLFHDKMVDLVVDDTG-YVANKTLQELKAYDVGKGQRILTLEETL---DFIDKRVRVNIEIKGEGVAGAVFRIIKRCVEEKGWSWDDFLVSSFNHYELLEFNRLT------SRIKIGAVIAGIPIGYAECATRVNAYSLHPSKEFINQALIEDAHKRGLKVFVYTPNATEDIRQMKSMGVDGIFSDFPDRI 226
BLAST of mRNA_H-paniculata_contig187.4630.1 vs. uniprot
Match: A0A7V2GE01_9DELT (Glycerophosphodiester phosphodiesterase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V2GE01_9DELT) HSP 1 Score: 114 bits (286), Expect = 1.320e-24 Identity = 70/236 (29.66%), Postives = 112/236 (47.46%), Query Frame = 3
Query: 672 IGHKGAHGHVEGNTMASFHKAVQMGVDMIEFDVLTTQDRVVVCHHDPLIEDTG----------EWIENLTLSQTRKRLKNHAVPTLEDMLRDQTLLQSGVHLYVDMKHTEIVRAVLAAVKQAVDGWGWTADRFVIAGFRQLDLLQVNAHRQAFPELAKLRTACITDGFPLTLARDFEALKVDALSTGKDHVSPDLVADCQRRGIQVWAWTVNNVHFMKRLMKMGVDGICTDYPELV 1349
H+GA GH NT+ + KA+ MGVD IE DV D ++V H D L T E++ +L K +P L + L+ L +++K T + ++ + GW D F+++ F L+ V +Q P + RT + G PL AR + LK D++ D ++ V D RG+ V+ +T+NN + R++ MGVDG+ T++PE+V
Sbjct: 7 FAHRGASGHEPENTLIAMEKAISMGVDWIELDVRVVDDELIVIHDDRLERTTNGAGCVHEHSLEYLRSLDAG------KGQRIPLLRETF---DLINKRAGLNIELKGTGTAGPTVELIRHYIRNRGWKYDEFIVSSFDHHALVTV---KQIDPAV---RTGALVVGIPLGYARFAQELKADSVHCSLDFINDAFVHDAHARGLNVYVFTINNREDLDRVVTMGVDGVFTNFPEIV 227
BLAST of mRNA_H-paniculata_contig187.4630.1 vs. uniprot
Match: A0A7V6E066_9BACT (Glycerophosphodiester phosphodiesterase n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A7V6E066_9BACT) HSP 1 Score: 112 bits (279), Expect = 6.020e-24 Identity = 78/233 (33.48%), Postives = 128/233 (54.94%), Query Frame = 3
Query: 666 LNIGHKGAHGHVEGNTMASFHKAVQMGVDMIEFDVLTTQDRVVVCHHDPLIED-TGEW--IENLTLSQTRKRLKNHA--VPTLEDMLRDQTLLQSGVHLYVDMKHTEIVRAVLAAVKQAVDGWGWTADRFVIAGFRQLDLLQVNAHRQAFPELAKLRTACITDGFPLTLARDFEALKVDALSTGKDHVSPDLVADCQRRGIQVWAWTVNNVHFMKRLMKMGVDGICTDYPELV 1349
+ IGH+GA GH N+MASF KAVQ+GV+MIEFDV T DR+ + HD TG+ I +TL + K N+ VPTL+++ + + + V Y+++K + R ++ + +A++ + ++F I F + L + H +PE+ RT IT LAR E + D S ++P++V +RR +++AWT N + R+ +G+DGI +D+PE +
Sbjct: 3 IAIGHRGAMGHELENSMASFKKAVQLGVEMIEFDVRLTADRIPIVFHDYFTRRLTGKQGLISRITLDRIPKFPLNNGEKVPTLDEVC--EFISSARVQAYIEVKVRDR-RGII--ISKALEHF--PPEQFYIGSFDRTYLANIERH---YPEV---RTIAITFRKGKELARFIETGEEDCFSVQHRSITPEIVEIVRRRDKKIFAWTANKPEDIARVKSLGIDGIVSDFPERI 222
BLAST of mRNA_H-paniculata_contig187.4630.1 vs. uniprot
Match: A0A3R6ZVH9_9BACT (Glycerophosphodiester phosphodiesterase n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=A0A3R6ZVH9_9BACT) HSP 1 Score: 112 bits (279), Expect = 6.330e-24 Identity = 65/233 (27.90%), Postives = 121/233 (51.93%), Query Frame = 3
Query: 666 LNIGHKGAHGHVEGNTMASFHKAVQMGVDMIEFDVLTTQDRVVVCHHDPLIEDTGE---WIENLTLSQTRKRL--KNHAVPTLEDMLRDQTLLQSGVHLYVDMKHTEIVRAVLAAVKQAVDGWGWTADRFVIAGFRQLDLLQVNAHRQAFPELAKLRTACITDGFPLTLARDFEALKVDALSTGKDHVSPDLVADCQRRGIQVWAWTVNNVHFMKRLMKMGVDGICTDYPELV 1349
L IGH+GA G+ NT+ SF KA+++GVDMIE DV Q +V HD ++ T ++ + T ++ R L + +PTL ++ L+ V + V++K V + Q + WTA+ F+++ F D ++ ++ PE+ R + G P+ ++ E + ++ D +AD +RG +V+ +TVN+ + ++ ++GVDG+ ++YP+ +
Sbjct: 2 LKIGHRGAMGYEPENTLRSFAKALELGVDMIELDVYVCQSGELVVIHDDKVDRTTNGHGYVVDKTFTEIRSLLIAQGEKIPTLSEVF---DLVDKKVPINVELKGEHTAEPVAQLIGQYIKEKDWTAEHFLVSSF---DHYELKRFKELMPEI---RVGALIAGIPIGYSKFAEEVSAYSVHLSLDFARQKYIADAHQRGFKVFVYTVNDKDDINKMKELGVDGLFSNYPDRI 225
BLAST of mRNA_H-paniculata_contig187.4630.1 vs. uniprot
Match: A0A4U1M0M4_9FLAO (Glycerophosphodiester phosphodiesterase n=3 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A4U1M0M4_9FLAO) HSP 1 Score: 111 bits (278), Expect = 1.000e-23 Identity = 76/236 (32.20%), Postives = 120/236 (50.85%), Query Frame = 3
Query: 660 KCLNIGHKGAHGHVEGNTMASFHKAVQMGVDMIEFDVLTTQDRVVVCHHDPLIE---DTGEWIENLTLSQTRKRLK--NHAVPTLEDMLRDQTLLQSGVHLYVDMKHTEIVRAVLAAVKQAVDGWGWTADRFVIAGFRQLDLLQVNAHRQAFPELAKLRTACITDGFPLTLARDFEALKVDALSTGKDHVSPDLVADCQRRGIQVWAWTVNNVHFMKRLMKMGVDGICTDYPELVH 1352
K L IGH+GA G+ NT+AS KA+ MGVDMIE DV+ + V HD ++ + G IE L +K + NH +P L+D+L+ L+ + V L +++K V V GW VI+ F +L ++ R+ PE+A A +T+ P+ + L A++ + ++ + V Q G +V WTVN +K++ + GVDGI T+YP+ V+
Sbjct: 5 KPLVIGHRGAMGYETENTLASVQKAMDMGVDMIEIDVINIKSGETVVFHDKTLDRLGNAGGNIEEYNLYDLKKVILDGNHRIPLLQDVLK---LINNKVALNIELKGDGTANRVNFITDYYVKNGGWEWKNIVISSFNWEELRRL---RKLNPEIA---IAVLTEEDPVAAIAVAKELNAVAINPYFEELTQEKVDKIQSEGFKVLTWTVNEPAAIKKMQEFGVDGIITNYPDRVN 231 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig187.4630.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig187.4630.1 >prot_H-paniculata_contig187.4630.1 ID=prot_H-paniculata_contig187.4630.1|Name=mRNA_H-paniculata_contig187.4630.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=645bp MGELEAQSADKGANNVDHHREDKRALAQHHDKSMRATQLPEELMSSVLVFback to top mRNA from alignment at H-paniculata_contig187:34008..44224+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig187.4630.1 ID=mRNA_H-paniculata_contig187.4630.1|Name=mRNA_H-paniculata_contig187.4630.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10217bp|location=Sequence derived from alignment at H-paniculata_contig187:34008..44224+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig187:34008..44224+ >mRNA_H-paniculata_contig187.4630.1 ID=mRNA_H-paniculata_contig187.4630.1|Name=mRNA_H-paniculata_contig187.4630.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3870bp|location=Sequence derived from alignment at H-paniculata_contig187:34008..44224+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |