prot_H-paniculata_contig187.4627.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig187.4627.1
Unique Nameprot_H-paniculata_contig187.4627.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length197
Homology
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BLAST of mRNA_H-paniculata_contig187.4627.1 vs. uniprot
Match: D8LEM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM9_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 2.200e-48
Identity = 99/187 (52.94%), Postives = 117/187 (62.57%), Query Frame = 0 
Query:    4 REVDWRELTRNLNVLLLKEEAGLSARDLHIGFTQRFRKSPFLDGVPIRYAVTSGWLKGVCFDAVNRVFNLVVRVPHGNREAPPDDDDHEDSKRARSLPSSTDRQGMEGRGEGSPPSSGPAVVAWKLLSREFREILASGPLEPREVHVRYTREVKKRLILGDT-TMRDAVHDGLLEGITVERTTRRLM 189
            R VDWREL  NLN  LLKEE  L+ RDL+  F QRF KSPFLDG P+RYAV++GWLKGVC+D  N+ FNL VRVP G RE PPD         A + P +  +          P S  P    W  LS EFR++L  G LEP+EVHV+Y RE +K LILG+   MR AV  GLL GIT +  +RRLM
Sbjct:  129 RGVDWRELKGNLN-FLLKEEGELTGRDLNHAFQQRFGKSPFLDGTPLRYAVSAGWLKGVCYDLTNKCFNLTVRVPAGRREDPPDG--------APTFPPTGSQLRAGAPRRDVPRSLSPDDFDWGRLSTEFRQLLLQGALEPKEVHVKYHREFRKPLILGEGYNMRQAVTAGLLIGITFDPGSRRLM 306
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig187.4627.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEM9_ECTSI2.200e-4852.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig187contigH-paniculata_contig187:4456..21116 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig187.4627.1mRNA_H-paniculata_contig187.4627.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig187 2353..21116 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig187.4627.1 ID=prot_H-paniculata_contig187.4627.1|Name=mRNA_H-paniculata_contig187.4627.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=197bp
KRSREVDWRELTRNLNVLLLKEEAGLSARDLHIGFTQRFRKSPFLDGVPI
RYAVTSGWLKGVCFDAVNRVFNLVVRVPHGNREAPPDDDDHEDSKRARSL
PSSTDRQGMEGRGEGSPPSSGPAVVAWKLLSREFREILASGPLEPREVHV
RYTREVKKRLILGDTTMRDAVHDGLLEGITVERTTRRLMVDPGYKS*
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