prot_H-paniculata_contig187.4628.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig187.4628.1
Unique Nameprot_H-paniculata_contig187.4628.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length140
Homology
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BLAST of mRNA_H-paniculata_contig187.4628.1 vs. uniprot
Match: A0A6H5KX85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX85_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 4.010e-22
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 0 
Query:   21 GPAIDIPLLLREKGGHIRVSELWEEYRAMFGATQYTLRDMFAMVQGGSIPGVVHEPPAGIRLLPSS 86
            GPAIDIP LL E+GG IR++ LWE Y+A FG T+YTL+D+FAMV+ G IP VVHEPPAGIRLLPS+
Sbjct:  248 GPAIDIPQLLLERGGRIRITALWEAYQARFGETRYTLKDLFAMVKAGEIPFVVHEPPAGIRLLPSA 313
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig187.4628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KX85_9PHAE4.010e-2271.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig187contigH-paniculata_contig187:21531..22500 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig187.4628.1mRNA_H-paniculata_contig187.4628.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig187 21531..22500 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig187.4628.1 ID=prot_H-paniculata_contig187.4628.1|Name=mRNA_H-paniculata_contig187.4628.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=140bp
MLRTGWGAAVGVVPRARQERGPAIDIPLLLREKGGHIRVSELWEEYRAMF
GATQYTLRDMFAMVQGGSIPGVVHEPPAGIRLLPSSAGGLTSPSADNVTT
ITAAAINGAGVAASAGVAAADTAMDGAYGGGDRGGGEGGG
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