prot_H-paniculata_contig18698.4625.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18698.4625.1
Unique Nameprot_H-paniculata_contig18698.4625.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length76
Homology
BLAST of mRNA_H-paniculata_contig18698.4625.1 vs. uniprot
Match: D8LEU4_ECTSI (Structural maintenance of chromosomes protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU4_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 8.110e-36
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0
Query:    1 DGDEVVLRRSIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            DGDEVVLRR+IG+KKDEFFLN KRVTKQEVSSLLESAGFSK+NPYYIVQQGKVS LTLMKDAERLNLLKEVAGTKV
Sbjct:   93 DGDEVVLRRNIGMKKDEFFLNLKRVTKQEVSSLLESAGFSKANPYYIVQQGKVSALTLMKDAERLNLLKEVAGTKV 168          
BLAST of mRNA_H-paniculata_contig18698.4625.1 vs. uniprot
Match: A0A836CH46_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH46_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.330e-34
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 0
Query:    1 DGDEVVLRRSIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            DGDEVVLRR+IGLKKDEFFLNRKRVTK +VSSLLESAGFSKSNPYYIVQQGKVS LT+M D ERLNLLKEVAGTKV
Sbjct:   93 DGDEVVLRRTIGLKKDEFFLNRKRVTKADVSSLLESAGFSKSNPYYIVQQGKVSALTMMHDTERLNLLKEVAGTKV 168          
BLAST of mRNA_H-paniculata_contig18698.4625.1 vs. uniprot
Match: A0A6H5KK26_9PHAE (SMC_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK26_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 5.230e-34
Identity = 71/93 (76.34%), Postives = 74/93 (79.57%), Query Frame = 0
Query:    1 DGDEVVLRRSIGLKKDEFFLNRKRVTKQEV-----------------SSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            DGDEVVLRR+IG+KKDEFFLN KRVTKQEV                 SSLLESAGFSK+NPYYIVQQGKVS LTLMKDAERLNLLKEVAGTKV
Sbjct:   93 DGDEVVLRRNIGMKKDEFFLNLKRVTKQEVGGKEEEFDRGVIGALKVSSLLESAGFSKANPYYIVQQGKVSALTLMKDAERLNLLKEVAGTKV 185          
BLAST of mRNA_H-paniculata_contig18698.4625.1 vs. uniprot
Match: A0A7S1U8S3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8S3_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.170e-33
Identity = 66/76 (86.84%), Postives = 72/76 (94.74%), Query Frame = 0
Query:    1 DGDEVVLRRSIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            DGDE+VLRR++GLKKDEFFLNR+RVTK EV SLLESAGFSKSNPYYIVQQGKV+ L LMKD+ERLNLLKEVAGTKV
Sbjct:   93 DGDEIVLRRTVGLKKDEFFLNRRRVTKGEVGSLLESAGFSKSNPYYIVQQGKVNALCLMKDSERLNLLKEVAGTKV 168          
BLAST of mRNA_H-paniculata_contig18698.4625.1 vs. uniprot
Match: A0A7S2F438_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F438_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.940e-33
Identity = 67/76 (88.16%), Postives = 70/76 (92.11%), Query Frame = 0
Query:    1 DGDEVVLRRSIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            DGDEVVLRR+IGLKKDEFFLNRKRVTK EVSSLLESAGFSKSNPYYIVQQGKV+ L LMKD ERL LLKEV GT+V
Sbjct:  113 DGDEVVLRRTIGLKKDEFFLNRKRVTKSEVSSLLESAGFSKSNPYYIVQQGKVNALCLMKDQERLQLLKEVGGTRV 188          
BLAST of mRNA_H-paniculata_contig18698.4625.1 vs. uniprot
Match: W7T3Q8_9STRA (Structural maintenance of chromosomes protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3Q8_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.970e-33
Identity = 66/76 (86.84%), Postives = 74/76 (97.37%), Query Frame = 0
Query:    1 DGDEVVLRRSIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            +GDEVVLRR+IG+KKDEFFLNRKRVTKQEVSSLLESAGFS+SNPYYIVQQGKV+ LTLM+D +RL+LLKEVAGTKV
Sbjct:   93 EGDEVVLRRTIGVKKDEFFLNRKRVTKQEVSSLLESAGFSRSNPYYIVQQGKVNMLTLMRDDQRLDLLKEVAGTKV 168          
BLAST of mRNA_H-paniculata_contig18698.4625.1 vs. uniprot
Match: A0A7R9U6Y3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6Y3_9STRA)

HSP 1 Score: 127 bits (318), Expect = 2.600e-32
Identity = 64/76 (84.21%), Postives = 70/76 (92.11%), Query Frame = 0
Query:    1 DGDEVVLRRSIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            DGDE+VLRR++GLKKDEFFLNR+RV K EV SLLESAGFSKSNPYYIV+QGKV+ L LMKD ERLNLLKEVAGTKV
Sbjct:   93 DGDEIVLRRTVGLKKDEFFLNRRRVRKGEVESLLESAGFSKSNPYYIVEQGKVNALCLMKDTERLNLLKEVAGTKV 168          
BLAST of mRNA_H-paniculata_contig18698.4625.1 vs. uniprot
Match: A0A397B2P4_9STRA (SMC_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397B2P4_9STRA)

HSP 1 Score: 118 bits (296), Expect = 5.720e-31
Identity = 59/76 (77.63%), Postives = 69/76 (90.79%), Query Frame = 0
Query:    1 DGDEVVLRRSIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            D ++VVLRR+IG+KKDEFFLNRK +TKQ+V+ LLESAGFS+SNPYYIVQQGKV+ L LMKD ERL LLK+VAGTKV
Sbjct:   93 DTEDVVLRRTIGVKKDEFFLNRKHITKQDVNHLLESAGFSRSNPYYIVQQGKVNALALMKDKERLELLKDVAGTKV 168          
BLAST of mRNA_H-paniculata_contig18698.4625.1 vs. uniprot
Match: A0A7S1UX63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UX63_9STRA)

HSP 1 Score: 114 bits (286), Expect = 2.920e-30
Identity = 59/76 (77.63%), Postives = 65/76 (85.53%), Query Frame = 0
Query:    1 DGDEVVLRRSIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            + DEVVLRR++G KKDEFFL RKR TK EV SLLE AGFSKSNPYYIVQQGKV+ L +M D+ERLNLLKEVAGT V
Sbjct:   70 NSDEVVLRRTVGHKKDEFFLQRKRATKSEVLSLLEGAGFSKSNPYYIVQQGKVNALCVMNDSERLNLLKEVAGTTV 145          
BLAST of mRNA_H-paniculata_contig18698.4625.1 vs. uniprot
Match: A0A7S1CD09_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CD09_9STRA)

HSP 1 Score: 112 bits (281), Expect = 5.690e-30
Identity = 57/76 (75.00%), Postives = 66/76 (86.84%), Query Frame = 0
Query:    1 DGDEVVLRRSIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            D +EVVLRR+IGLKKDE+F+NRKR+ K +V +LLESAGFS+SNPYYIVQQGKV+ L  MKD ERL LLKEVAGT V
Sbjct:   28 DHEEVVLRRTIGLKKDEYFMNRKRIRKSDVVNLLESAGFSRSNPYYIVQQGKVAALCTMKDRERLQLLKEVAGTTV 103          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18698.4625.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEU4_ECTSI8.110e-3693.42Structural maintenance of chromosomes protein n=1 ... [more]
A0A836CH46_9STRA1.330e-3490.79Structural maintenance of chromosomes protein n=1 ... [more]
A0A6H5KK26_9PHAE5.230e-3476.34SMC_N domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S1U8S3_9STRA1.170e-3386.84Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2F438_9STRA1.940e-3388.16Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
W7T3Q8_9STRA2.970e-3386.84Structural maintenance of chromosomes protein n=2 ... [more]
A0A7R9U6Y3_9STRA2.600e-3284.21Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A397B2P4_9STRA5.720e-3177.63SMC_N domain-containing protein (Fragment) n=1 Tax... [more]
A0A7S1UX63_9STRA2.920e-3077.63Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S1CD09_9STRA5.690e-3075.00Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..76
e-value: 4.3E-12
score: 48.6
NoneNo IPR availablePANTHERPTHR43977FAMILY NOT NAMEDcoord: 1..76
NoneNo IPR availablePANTHERPTHR43977:SF1STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3coord: 1..76
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18698contigH-paniculata_contig18698:1046..1273 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18698.4625.1mRNA_H-paniculata_contig18698.4625.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18698 1046..1273 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18698.4625.1 ID=prot_H-paniculata_contig18698.4625.1|Name=mRNA_H-paniculata_contig18698.4625.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=76bp
DGDEVVLRRSIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQ
GKVSTLTLMKDAERLNLLKEVAGTKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase