prot_H-paniculata_contig1864.4611.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1864.4611.1
Unique Nameprot_H-paniculata_contig1864.4611.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length116
Homology
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BLAST of mRNA_H-paniculata_contig1864.4611.1 vs. uniprot
Match: D7G7R5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7R5_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 1.880e-42
Identity = 75/117 (64.10%), Postives = 87/117 (74.36%), Query Frame = 0 
Query:    1 MPTVRFRAAAVNVSHHVYLFGGRAANGDLVCTVDRYNAIDRIWETLDVVQENNCYSDHSGVATDDGTIFLFGGYSADYRSHATVVKVEVSGDD-IAFSTSTPMNIDRGDHVCSLVPS 116
            MPT RFRAAAVNVS HVYLFGGR A G+L C VDRY+ +   W  LDV Q  +C+SDHSGVA+DDGTI+LFGGY  DY +  TVVKVEVS DD + FST+  M I RGDH C  +P+
Sbjct:   77 MPTERFRAAAVNVSEHVYLFGGRDAAGNLTCNVDRYSVLTGEWTQLDVSQATDCFSDHSGVASDDGTIYLFGGYDQDYVAQTTVVKVEVSSDDTMTFSTTEAMTIKRGDHSCIRLPA 193
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BLAST of mRNA_H-paniculata_contig1864.4611.1 vs. uniprot
Match: B8C4U8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4U8_THAPS)

HSP 1 Score: 54.3 bits (129), Expect = 3.850e-6
Identity = 37/109 (33.94%), Postives = 53/109 (48.62%), Query Frame = 0 
Query:    1 MPTVRFRAAAVNVSHHVYLFGGRAANGDLVCTVDRYNAIDRIWETLDVVQENNCYSDHSGVATDDGTIFLFGGYSADYRSHATVVKVEVSG-DDIAFSTSTPMNIDRGD 108
            MP  R R  +V V   V L GGR     LV  +D Y+     W +   + E    SD +  A D  T++L GG+ ADY +   VV +++S  DD+ +S    +   RGD
Sbjct:  124 MPRKRARHVSVVVGGMVCLLGGRDETDGLVAEIDCYDPSTNTWSSPASLPEEYRNSDAAAFA-DGNTVYLIGGWDADYTALDRVVLIDMSNMDDVQYSDGPTLLDARGD 231
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1864.4611.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7R5_ECTSI1.880e-4264.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
B8C4U8_THAPS3.850e-633.94Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 1..115
e-value: 1.6E-12
score: 48.8
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 1..106
NoneNo IPR availablePFAMPF13418Kelch_4coord: 57..98
e-value: 5.2E-5
score: 23.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1864contigH-paniculata_contig1864:21577..23640 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1864.4611.1mRNA_H-paniculata_contig1864.4611.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1864 21577..23642 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1864.4611.1 ID=prot_H-paniculata_contig1864.4611.1|Name=mRNA_H-paniculata_contig1864.4611.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp
MPTVRFRAAAVNVSHHVYLFGGRAANGDLVCTVDRYNAIDRIWETLDVVQ
ENNCYSDHSGVATDDGTIFLFGGYSADYRSHATVVKVEVSGDDIAFSTST
PMNIDRGDHVCSLVPS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller