prot_H-paniculata_contig1862.4605.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1862.4605.1
Unique Nameprot_H-paniculata_contig1862.4605.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length122
Homology
BLAST of mRNA_H-paniculata_contig1862.4605.1 vs. uniprot
Match: A0A6H5JG45_9PHAE (Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG45_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 9.090e-39
Identity = 69/79 (87.34%), Postives = 73/79 (92.41%), Query Frame = 0
Query:   44 RPENVGILAADVYFPSTFVTQEDLETANGVSAGKYTIGLGQEAMSFTGDREDINSVCLTVVAQLLEKYSVSKESIGRIE 122
            RP NVGILAADVYFPSTFV+QEDLE AN VSAGKYTIGLGQEAM+FTGDREDINS+CLTVVAQLLEKY V K+ IGRIE
Sbjct:   46 RPANVGILAADVYFPSTFVSQEDLEVANSVSAGKYTIGLGQEAMAFTGDREDINSMCLTVVAQLLEKYDVPKDRIGRIE 124          
BLAST of mRNA_H-paniculata_contig1862.4605.1 vs. uniprot
Match: D7FXY3_ECTSI (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY3_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 2.830e-38
Identity = 71/80 (88.75%), Postives = 76/80 (95.00%), Query Frame = 0
Query:   43 GRPENVGILAADVYFPSTFVTQEDLETANGVSAGKYTIGLGQEAMSFTGDREDINSVCLTVVAQLLEKYSVSKESIGRIE 122
            GRP+NVGILAADVYFPSTFV+QEDLE ANGVSAGKYTIGLGQEAM+FTGDREDINS+CLTVVAQLLEKY V K+ IGRIE
Sbjct:   14 GRPDNVGILAADVYFPSTFVSQEDLEVANGVSAGKYTIGLGQEAMAFTGDREDINSMCLTVVAQLLEKYDVPKDRIGRIE 93          
BLAST of mRNA_H-paniculata_contig1862.4605.1 vs. uniprot
Match: A0A7S3HLA9_9STRA (Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLA9_9STRA)

HSP 1 Score: 119 bits (297), Expect = 2.350e-30
Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 0
Query:   47 NVGILAADVYFPSTFVTQEDLETANGVSAGKYTIGLGQEAMSFTGDREDINSVCLTVVAQLLEKYSVSKESIGRIE 122
            NVGILA +VYFPS++VTQ DLE A GVSAGKYTIGLGQE+M+FTGD+EDINSV LTVV  LLEKYS+S   IGR+E
Sbjct:    8 NVGILAMEVYFPSSYVTQTDLEVAFGVSAGKYTIGLGQESMAFTGDQEDINSVALTVVHNLLEKYSISPSEIGRLE 83          
BLAST of mRNA_H-paniculata_contig1862.4605.1 vs. uniprot
Match: A0A7R9YEV4_9STRA (Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEV4_9STRA)

HSP 1 Score: 115 bits (289), Expect = 5.420e-30
Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 0
Query:   44 RPENVGILAADVYFPSTFVTQEDLETANGVSAGKYTIGLGQEAMSFTGDREDINSVCLTVVAQLLEKYSVSKESIGRIE 122
            RP+NVGILAA+VYFP+  V Q DLE ANGVSAGKYT GLGQE M+FTGDREDINS+ LTV+  LLEKY +    +GR+E
Sbjct:   35 RPKNVGILAAEVYFPNYCVQQSDLEEANGVSAGKYTKGLGQEMMAFTGDREDINSISLTVLQNLLEKYDIDPRDVGRLE 113          
BLAST of mRNA_H-paniculata_contig1862.4605.1 vs. uniprot
Match: L8GE89_ACACA (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GE89_ACACA)

HSP 1 Score: 119 bits (298), Expect = 3.890e-29
Identity = 60/110 (54.55%), Postives = 76/110 (69.09%), Query Frame = 0
Query:   19 TVSCGRNGGFVSRAMSCAAGLIDGGR------PENVGILAADVYFPSTFVTQEDLETANGVSAGKYTIGLGQEAMSFTGDREDINSVCLTVVAQLLEKYSVSKESIGRIE 122
            T +CGR G     A S       G        P +VGI+A DVYFPST+V+Q DLET +GV+AGKYT+GLGQ +M+FTGDREDINS+CLT V  LLEKY++  + +GR+E
Sbjct:   33 TTACGRGGIATMLATSPTTSARRGVATDFSHYPRDVGIVALDVYFPSTYVSQADLETHDGVAAGKYTVGLGQTSMAFTGDREDINSICLTAVQSLLEKYNIDPKDVGRVE 142          
BLAST of mRNA_H-paniculata_contig1862.4605.1 vs. uniprot
Match: A0A836C9U2_9STRA (Hydroxymethylglutaryl-coenzyme A synthase N terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9U2_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.150e-28
Identity = 60/90 (66.67%), Postives = 71/90 (78.89%), Query Frame = 0
Query:   36 AAGLID---GGRPENVGILAADVYFPSTFVTQEDLETANGVSAGKYTIGLGQEAMSFTGDREDINSVCLTVVAQLLEKYSVSKESIGRIE 122
            AAG  D   G RP NVGILAA+VYFPST+V Q ++E ANGVS+GKYTIGLGQ  M+FTGDREDINS+ LT +A LLEK+S+    IGR+E
Sbjct:    8 AAGNSDEGGGSRPTNVGILAAEVYFPSTYVDQAEMEKANGVSSGKYTIGLGQLEMAFTGDREDINSIALTALAGLLEKFSIDPNDIGRLE 97          
BLAST of mRNA_H-paniculata_contig1862.4605.1 vs. uniprot
Match: A0A5D6XM49_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XM49_9STRA)

HSP 1 Score: 117 bits (293), Expect = 3.940e-28
Identity = 55/83 (66.27%), Postives = 66/83 (79.52%), Query Frame = 0
Query:   40 IDGGRPENVGILAADVYFPSTFVTQEDLETANGVSAGKYTIGLGQEAMSFTGDREDINSVCLTVVAQLLEKYSVSKESIGRIE 122
            +D  RP+NVG+LA +VYFP  FV Q DLE  +GV AGKYT+GLGQ+AM+FTGDRED+NS+ LT VA LLEKYSV    IGR+E
Sbjct:    1 MDAERPQNVGVLAMEVYFPRYFVAQSDLERYDGVPAGKYTLGLGQDAMAFTGDREDVNSIALTCVAALLEKYSVDPREIGRLE 83          
BLAST of mRNA_H-paniculata_contig1862.4605.1 vs. uniprot
Match: A0A7R9UCE0_9STRA (Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCE0_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.420e-27
Identity = 54/77 (70.13%), Postives = 65/77 (84.42%), Query Frame = 0
Query:   46 ENVGILAADVYFPSTFVTQEDLETANGVSAGKYTIGLGQEAMSFTGDREDINSVCLTVVAQLLEKYSVSKESIGRIE 122
            E+VGILA +VYFPST+V+Q+DLE ANGVS GKYT GLGQEAM+FT DRED+NSV LTV  +LLEKY +  + IGR+E
Sbjct:   38 EDVGILAMEVYFPSTYVSQKDLEKANGVSEGKYTKGLGQEAMAFTSDREDVNSVALTVFHRLLEKYEIDPKDIGRVE 114          
BLAST of mRNA_H-paniculata_contig1862.4605.1 vs. uniprot
Match: A0A482SR24_9ARCH (Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SR24_9ARCH)

HSP 1 Score: 113 bits (283), Expect = 5.290e-27
Identity = 56/89 (62.92%), Postives = 67/89 (75.28%), Query Frame = 0
Query:   34 SCAAGLIDGGRPENVGILAADVYFPSTFVTQEDLETANGVSAGKYTIGLGQEAMSFTGDREDINSVCLTVVAQLLEKYSVSKESIGRIE 122
            +CA+  +D      VGIL  +VYFPST+VTQ DLE AN VSAGKYTIGLGQE M+FTGD EDINS+ LTVV  LLEKY++    +GR+E
Sbjct:   26 NCASEPVD----NYVGILGMEVYFPSTYVTQADLEKANNVSAGKYTIGLGQEIMAFTGDHEDINSIALTVVHSLLEKYNIDPRDVGRLE 110          
BLAST of mRNA_H-paniculata_contig1862.4605.1 vs. uniprot
Match: A0A4V1IWB7_9FUNG (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4V1IWB7_9FUNG)

HSP 1 Score: 112 bits (279), Expect = 1.180e-26
Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = 0
Query:   42 GGRPENVGILAADVYFPSTFVTQEDLETANGVSAGKYTIGLGQEAMSFTGDREDINSVCLTVVAQLLEKYSVSKESIGRIE 122
            G RPENVGILA DVYFP T V Q +LE  +G S GKYTIGLGQ  M+F  DREDI+S+CLTVV+ L+EKY VS   IGR+E
Sbjct:    8 GARPENVGILAMDVYFPKTCVDQAELEKHDGASTGKYTIGLGQTKMAFVDDREDIHSICLTVVSSLMEKYGVSYSDIGRME 88          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1862.4605.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JG45_9PHAE9.090e-3987.34Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 ... [more]
D7FXY3_ECTSI2.830e-3888.75Hydroxymethylglutaryl-CoA synthase n=1 Tax=Ectocar... [more]
A0A7S3HLA9_9STRA2.350e-3076.32Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 ... [more]
A0A7R9YEV4_9STRA5.420e-3069.62Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 ... [more]
L8GE89_ACACA3.890e-2954.55Hydroxymethylglutaryl-CoA synthase n=1 Tax=Acantha... [more]
A0A836C9U2_9STRA1.150e-2866.67Hydroxymethylglutaryl-coenzyme A synthase N termin... [more]
A0A5D6XM49_9STRA3.940e-2866.27Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7R9UCE0_9STRA2.420e-2770.13Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 ... [more]
A0A482SR24_9ARCH5.290e-2762.92Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 ... [more]
A0A4V1IWB7_9FUNG1.180e-2666.67Hydroxymethylglutaryl-CoA synthase n=1 Tax=Thamnoc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016039Thiolase-likeGENE3D3.40.47.10coord: 42..122
e-value: 1.3E-26
score: 95.4
IPR016039Thiolase-likeSUPERFAMILY53901Thiolase-likecoord: 47..121
IPR013528Hydroxymethylglutaryl-coenzyme A synthase, N-terminalPFAMPF01154HMG_CoA_synt_Ncoord: 44..122
e-value: 4.3E-29
score: 101.6
NoneNo IPR availablePANTHERPTHR43323FAMILY NOT NAMEDcoord: 35..122
NoneNo IPR availablePANTHERPTHR43323:SF23-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASEcoord: 35..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1862contigH-paniculata_contig1862:4904..8583 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1862.4605.1mRNA_H-paniculata_contig1862.4605.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1862 4902..8583 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1862.4605.1 ID=prot_H-paniculata_contig1862.4605.1|Name=mRNA_H-paniculata_contig1862.4605.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp
LCCAGKLNFCHRLGWESPTVSCGRNGGFVSRAMSCAAGLIDGGRPENVGI
LAADVYFPSTFVTQEDLETANGVSAGKYTIGLGQEAMSFTGDREDINSVC
LTVVAQLLEKYSVSKESIGRIE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016039Thiolase-like
IPR013528HMG_CoA_synth_N