mRNA_H-paniculata_contig18618.4603.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig18618.4603.1
Unique NamemRNA_H-paniculata_contig18618.4603.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig18618.4603.1 vs. uniprot
Match: D8LLX9_ECTSI (Cilia- and flagella-associated protein 36 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX9_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 1.990e-80
Identity = 196/395 (49.62%), Postives = 241/395 (61.01%), Query Frame = 1 
Query:   10 VERLCSTSLAEVGVAVEDFVDALQASRL-HDVSTVVYEQLMALDDFVTFKKLMVKRNVELELEAVRALQGQGVPICRENGDQELSYDDSEPHLKEAATEAELAPANGSKKTAR--------RTTHDRQLKNAMDETLRELELMHKREAVEQAELEQAIAMSLALEKKRAKRTVQQ------------------------KTTERGGGGVEHQDGNSDRASGARVCCGGQKHEQSKVEEAKEIAD-ALAEAKCDFSSGGVGKQLPEDLSTGQQLSA-----NSADSKALPPVSRSRS-GQCLAHFRVGLGG-----------STCVQDSDVESAGRRREARVASEKSRQFLEERRRAQEKLREQSDVSKEDITQREQHLKDLRDRIVQVKRAEREE 1041
            VE LC+ SLAEVGVAV DFVDAL+ASR   D+ST VY+QL+ALDDFVTFKKLMVKRNVELELEAV ALQ QGVPI     D  +S D+    L     E  ++ +NG  K  +        R+  DRQL+ AMD  L+ELELMHKRE VEQAELEQAIAMSLALE KR+++   Q                        K+ + G  G +  DG+ DRA G  V    Q  E+    E  ++AD A AEAK DF   G G +     S+   LS          +KALPP+S++   G+ +A FR G G            +T ++D DVESA RRREAR ASEK+R+FLEERR+AQ+ L+ QS+VS+ED  QRE+HLK++RDRIV  KRA REE
Sbjct:   67 VETLCANSLAEVGVAVGDFVDALEASRFSQDISTAVYQQLLALDDFVTFKKLMVKRNVELELEAVHALQKQGVPIQHGIEDSGVSGDEE---LAGNGEEKSMSASNGESKRDKAAARPGRGRSALDRQLRKAMDANLQELELMHKREEVEQAELEQAIAMSLALEAKRSEQATLQECLDGVGDVSGPRFGSVPTGSQTGKSLQAGCKGGDDPDGDGDRAGGGGVSRRRQSKERDAARELADVADDAPAEAKRDFIGEGGGAEEKHRSSSSSSLSCLGGLKKGTGAKALPPLSKTPVVGEIVAPFRGGSGEGVEGCSISSSTATMIRDPDVESAERRREARAASEKARKFLEERRQAQKALKAQSEVSEEDSAQRERHLKNMRDRIVSAKRAGREE 458
[Close]
BLAST of mRNA_H-paniculata_contig18618.4603.1 vs. uniprot
Match: A0A6S9FTJ7_HETAK (Cilia- and flagella-associated protein 36 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FTJ7_HETAK)

HSP 1 Score: 111 bits (277), Expect = 5.380e-25
Identity = 76/172 (44.19%), Postives = 111/172 (64.53%), Query Frame = 1 
Query:    7 KVERLCSTSLAEVGVAVEDFVDALQASRL-HDVSTVVYEQLMALDDFVTFKKLMVKRNVELELEAVRALQGQGVPICRENGDQELSY---------DDSEP-HLKEAATEAELAPANGSKKTARRTTH-DRQLKNAMDETLRELELMHKREAVEQAELEQAIAMSLALEKKR 486
            +VE+L +  LAE+GV+ + F++A + +R   D++  VY+Q++A++DF+TFKKLMVKRN+ELELEAVR LQ +GVP+     ++  +          D+  P   KEAA E E   A  +K   +       Q+   MD  L E+EL+HK+E +EQ ELE+AIAMSLALE++R
Sbjct:   62 QVEQLLTQHLAELGVSEDMFLEACERARSSRDINQEVYDQIVAMEDFLTFKKLMVKRNMELELEAVRELQKEGVPLIAPADEEAAAAAFQREVKQADELTPAEAKEAAQEGEGEEAAQAKAGPKEGAELHAQVLEEMDGHLMEMELLHKKEEMEQMELERAIAMSLALEEER 233
[Close]
BLAST of mRNA_H-paniculata_contig18618.4603.1 vs. uniprot
Match: F0YGT0_AURAN (Cilia- and flagella-associated protein 36 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGT0_AURAN)

HSP 1 Score: 114 bits (286), Expect = 2.750e-24
Identity = 117/385 (30.39%), Postives = 189/385 (49.09%), Query Frame = 1 
Query:    1 MSKVERLCSTSLAEVGVAVEDFVDALQASRLH-DVSTVVYEQLMALDDFVTFKKLMVKRNVELELEAVRALQGQGVPICRENGDQEL----------SYDDSEPHLKEAATEAELAPANGSKKTARRTTHDRQLKNAMDETLRELELMHKREAVEQAELEQAIAMSLALEKKRAKRTVQQKTTERGGGGVEHQDGNSDRASGARVCCGGQKHEQSKVEEAKEIADALAEAKCDFSSGGVGKQLPEDLSTGQQLSANSADSKALPP-------VSR---SRSGQCLAH----------FRVGLGGSTCVQDSDVE---SAGRRREARVASEKSRQFLEERRRAQEKLREQSDVSKEDITQREQHLKDLRDRIVQVKRAEREEEASK 1053
            + ++E L    L +VG++ +  V A + +R + +++  VYEQ++A+DDF+TFKKLMVKRNVEL  EA++AL    VPI     ++E           S D +   +KE+ TE+++   N S K       D++L +AMD+ L E+E +HKRE +EQ ELEQAIA SLA EK+R K    +         +E     +D +   R                 E  +  ++  C+         +P D   G  + A S  S+ + P       + R   S   +C+             R+G  G   ++   ++      RRR A  A  ++++ L ERR  + +++ Q+ V+  D+ +RE  LK+ RDRI+  K AER++  +K
Sbjct:  105 VDEIEALIDAQLDKVGISNDLLVAACKHARHNREINREVYEQMIAMDDFLTFKKLMVKRNVELGYEALKALHKDQVPIIAPESEEEAEAQFQRAVKESEDTTFAEIKESETESQI---NSSVKGH---LFDKELCDAMDQNLMEIEALHKREEIEQLELEQAIAESLATEKERMKALRNE---------IE-----ADASPNQR----------------DEPCEYNSDYTCNKCESTRKSPVPSDEVVGLSIVAESKLSEIVSPRPSLNAPIERFHASLQDKCVRQPYDVLIYTKLDRIGSSGDNRMKAKQIQIEMHEKRRRVAEAAFNRNQEILRERRLQEREIQGQAGVTAADMLRRELRLKEQRDRIIAKKNAERQQRLTK 453
[Close]
BLAST of mRNA_H-paniculata_contig18618.4603.1 vs. uniprot
Match: A0A1V9YLN4_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YLN4_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 5.580e-16
Identity = 61/172 (35.47%), Postives = 102/172 (59.30%), Query Frame = 1 
Query:   10 VERLCSTSLAEVGVAVEDFVD-ALQASRLHDVSTVVYEQLMALDDFVTFKKLMVKRNVELELEAVRALQGQGVPICRENGDQELSYDDSEPHLKEAATEAELAPANGSKKTARRTTHDRQLKNAMDETLRELELMHKREAVEQAELEQAIAMSLALEKKRAK-RTVQQKTTE 519
            V+ + + +LAE+G+   DF D  ++     ++S  V  Q++A+DDF+TFKKLMVKRN+ELELE + A++ Q          +E + +++   L+  A EAEL               D  +   +++   E++L++K+E +EQAELE AIA+S+A+E++R +  +VQ K  E
Sbjct:   61 VDGVLTANLAEIGITPTDFADICVKCRNSTEISMAVVNQILAIDDFMTFKKLMVKRNLELELEVITAVRDQ----------KEKAAEEARATLEAEAKEAELKSMEDD---------DMDINEYVEDYWMEMDLLYKQEEMEQAELEAAIALSIAVEEERFRLASVQAKAAE 213
[Close]
BLAST of mRNA_H-paniculata_contig18618.4603.1 vs. uniprot
Match: T0R0R9_SAPDV (Cilia- and flagella-associated protein 36 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R0R9_SAPDV)

HSP 1 Score: 88.6 bits (218), Expect = 7.250e-16
Identity = 58/160 (36.25%), Postives = 92/160 (57.50%), Query Frame = 1 
Query:   10 VERLCSTSLAEVGVAVEDFVD-ALQASRLHDVSTVVYEQLMALDDFVTFKKLMVKRNVELELEAVRALQGQGVPICRENGDQELSYDDSEPHLKEAATEAELAPANGSKKTARRTTHDRQLKNAMDETLRELELMHKREAVEQAELEQAIAMSLALEKKR 486
            V+ + + +LAE+G++  DF D  +Q     ++S  V  Q++A+DDF+TFKKLMVKRN+ELELE + A++                 D  E    EA    E     G  KT      D  + + +++   E++L++K+E +EQAELE AIA+S+A+E++R
Sbjct:   61 VDGVLTANLAEIGISAADFADICVQCRNSTEISMAVVNQILAIDDFLTFKKLMVKRNLELELEVITAVR-----------------DQKEKAADEARATLEAETKEGECKTME--DDDMDINDYVEDYWMEMDLLYKQEEMEQAELEAAIALSIAVEEER 201
[Close]
BLAST of mRNA_H-paniculata_contig18618.4603.1 vs. uniprot
Match: A0A1V9ZWG9_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWG9_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.510e-15
Identity = 58/160 (36.25%), Postives = 91/160 (56.88%), Query Frame = 1 
Query:   10 VERLCSTSLAEVGVAVEDFVD-ALQASRLHDVSTVVYEQLMALDDFVTFKKLMVKRNVELELEAVRALQGQGVPICRENGDQELSYDDSEPHLKEAATEAELAPANGSKKTARRTTHDRQLKNAMDETLRELELMHKREAVEQAELEQAIAMSLALEKKR 486
            V+ + + +LAE+G+   DF D  +Q     ++S  V  Q++A+DDFVTFKKLMVKRN+ELELE + A++ Q   IC                  EA  + E        +T      D  +   +++   E++L++K+E +EQAELE AIA+S+A+E++R
Sbjct:  153 VDGVLTANLAEIGITPTDFADICVQCRNSTEISMAVINQILAIDDFVTFKKLMVKRNLELELEVITAVRDQKTTIC------------------EAQAKVE--------ETKCMQEDDTDVNEYVEDYWMEMDLLYKQEEMEQAELEAAIALSIAVEEER 286
[Close]
BLAST of mRNA_H-paniculata_contig18618.4603.1 vs. uniprot
Match: A0A8K1CJL2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJL2_PYTOL)

HSP 1 Score: 87.0 bits (214), Expect = 2.020e-15
Identity = 60/157 (38.22%), Postives = 86/157 (54.78%), Query Frame = 1 
Query:   10 VERLCSTSLAEVGVAVEDFVDALQASRL-HDVSTVVYEQLMALDDFVTFKKLMVKRNVELELEAVRALQGQGVPICRENGDQELSYDDSEPHLKEAATEAELAPANGSKKTARRTTHDRQLKNAMDETLRELELMHKREAVEQAELEQAIAMSLALE 477
            VE +  ++LAE+G+   DF +  + +R   D+S  V  Q++A+DDFVTFKKLMVKRN+ELELEA++AL+ + +        QE + +D E HL E                                    L +++K+E +EQAELE AIAMSLAL+
Sbjct:   60 VETVLCSNLAEIGLTASDFAEICERARTASDISMEVVNQILAMDDFVTFKKLMVKRNLELELEAIKALREETLEA------QEAAENDVETHLME------------------------------------LSVLYKQEEMEQAELETAIAMSLALQ 174
[Close]
BLAST of mRNA_H-paniculata_contig18618.4603.1 vs. uniprot
Match: K3XC66_GLOUD (Cilia- and flagella-associated protein 36 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XC66_GLOUD)

HSP 1 Score: 85.9 bits (211), Expect = 5.550e-15
Identity = 56/157 (35.67%), Postives = 84/157 (53.50%), Query Frame = 1 
Query:   10 VERLCSTSLAEVGVAVEDFVDALQASR-LHDVSTVVYEQLMALDDFVTFKKLMVKRNVELELEAVRALQGQGVPICRENGDQELSYDDSEPHLKEAATEAELAPANGSKKTARRTTHDRQLKNAMDETLRELELMHKREAVEQAELEQAIAMSLALE 477
            VE +  +SLAE+G+   DF +  + SR + D+S  V  Q++A+DDF+TFKKLMVKRN+ELELEA++AL+ + +         ++   D E H  E                                    L +++K+E +EQAELE AIAMS+A++
Sbjct:   63 VEGVLGSSLAEIGITSSDFAEICERSRSVSDISMEVVNQILAMDDFLTFKKLMVKRNLELELEAIKALREEAIDAV------DMDTSDMESHFME------------------------------------LSILYKQEEMEQAELESAIAMSIAVQ 177
[Close]
BLAST of mRNA_H-paniculata_contig18618.4603.1 vs. uniprot
Match: A0A6G0WLL1_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WLL1_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 5.980e-15
Identity = 62/176 (35.23%), Postives = 96/176 (54.55%), Query Frame = 1 
Query:   10 VERLCSTSLAEVGVAVEDFVDALQASRLH-DVSTVVYEQLMALDDFVTFKKLMVKRNVELELEAVRALQGQGVPICRENGDQELSYDDSEPHLKEAATEAELAPANGSKKTARRTTHDRQLKNAMDETLR----ELELMHKREAVEQAELEQAIAMSLALEKKRAK-RTVQQKTTE 519
            V+ + + +LAE+G+   DF D     R   DVS  V  Q++A+DDF+TFKKLMVKRN+EL+LE + A++                             EA  A A     +     +D Q +N +D+ +     E++L++K+E +EQAELE AIA+S+A+E++R +  +VQ K  E
Sbjct:   61 VDGVLTANLAEIGITASDFADICTKCRHSTDVSMAVINQILAIDDFLTFKKLMVKRNLELDLEVITAVR-----------------------------EANQAKATTESDSKEEVENDEQEENDIDDCVEDYWMEMDLLYKQEEMEQAELEAAIALSIAVEEERFRLASVQAKAAE 207
[Close]
BLAST of mRNA_H-paniculata_contig18618.4603.1 vs. uniprot
Match: A0A835YQN8_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQN8_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.360e-14
Identity = 54/145 (37.24%), Postives = 81/145 (55.86%), Query Frame = 1 
Query:   10 VERLCSTSLAEVGVAVEDFVDALQASRLHDVSTVVYEQLMALDDFVTFKKLMVKRNVELELEAVRALQGQGVPIC----RENGDQELSYDDSEPHLKEAATEAELAPANGSKKTARRTTHDRQLKNAMDETLRELELMHKREAVE 432
            ++ L + +L + G+ VE  V AL  ++L  +   V E  +A DDFVTFKK+MVKRN+ELELEA+RALQ QGVP      +E   Q+    +    + + A  +++  +       +    D  L  AMD+   EL+L+HK E +E
Sbjct:   59 IDTLVADTLGDAGIDVEQVVLALATTKLTTIKNSVLEHFVAFDDFVTFKKMMVKRNMELELEAMRALQQQGVPFTAPASKEQAQQKF---ERAVKIADEAETSDMVDSGVDDMGLKGADLDSALLTAMDKNFMELDLLHKEEEIE 200
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18618.4603.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLX9_ECTSI1.990e-8049.62Cilia- and flagella-associated protein 36 n=1 Tax=... [more]
A0A6S9FTJ7_HETAK5.380e-2544.19Cilia- and flagella-associated protein 36 (Fragmen... [more]
F0YGT0_AURAN2.750e-2430.39Cilia- and flagella-associated protein 36 n=1 Tax=... [more]
A0A1V9YLN4_9STRA5.580e-1635.47Cilia- and flagella-associated protein 36 n=1 Tax=... [more]
T0R0R9_SAPDV7.250e-1636.25Cilia- and flagella-associated protein 36 n=2 Tax=... [more]
A0A1V9ZWG9_9STRA1.510e-1536.25Cilia- and flagella-associated protein 36 n=1 Tax=... [more]
A0A8K1CJL2_PYTOL2.020e-1538.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3XC66_GLOUD5.550e-1535.67Cilia- and flagella-associated protein 36 n=1 Tax=... [more]
A0A6G0WLL1_9STRA5.980e-1535.23Cilia- and flagella-associated protein 36 n=1 Tax=... [more]
A0A835YQN8_9STRA1.360e-1437.24Cilia- and flagella-associated protein 36 n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18618contigH-paniculata_contig18618:773..4708 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score273.5
Seed ortholog evalue1.4e-70
Seed eggNOG ortholog2880.D8LLX9
Preferred nameCFAP36
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0032838,GO:0035869,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0047485,GO:0060271,GO:0070925,GO:0071840,GO:0097014,GO:0097546,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038
EggNOG free text desc.protein N-terminus binding
EggNOG OGsKOG4511@1,KOG4511@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1056
Cds size1056
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929438.3834724-CDS-H-paniculata_contig18618:772..8831622929438.3834724-CDS-H-paniculata_contig18618:772..883Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18618 773..883 -
1691480861.4885068-CDS-H-paniculata_contig18618:772..8831691480861.4885068-CDS-H-paniculata_contig18618:772..883Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18618 773..883 -
1622929438.3994691-CDS-H-paniculata_contig18618:1208..14371622929438.3994691-CDS-H-paniculata_contig18618:1208..1437Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18618 1209..1437 -
1691480861.499809-CDS-H-paniculata_contig18618:1208..14371691480861.499809-CDS-H-paniculata_contig18618:1208..1437Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18618 1209..1437 -
1622929438.4127314-CDS-H-paniculata_contig18618:1631..17891622929438.4127314-CDS-H-paniculata_contig18618:1631..1789Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18618 1632..1789 -
1691480861.50756-CDS-H-paniculata_contig18618:1631..17891691480861.50756-CDS-H-paniculata_contig18618:1631..1789Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18618 1632..1789 -
1622929438.425368-CDS-H-paniculata_contig18618:2096..22341622929438.425368-CDS-H-paniculata_contig18618:2096..2234Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18618 2097..2234 -
1691480861.5153265-CDS-H-paniculata_contig18618:2096..22341691480861.5153265-CDS-H-paniculata_contig18618:2096..2234Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18618 2097..2234 -
1622929438.4362636-CDS-H-paniculata_contig18618:2902..30341622929438.4362636-CDS-H-paniculata_contig18618:2902..3034Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18618 2903..3034 -
1691480861.5232422-CDS-H-paniculata_contig18618:2902..30341691480861.5232422-CDS-H-paniculata_contig18618:2902..3034Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18618 2903..3034 -
1622929438.4491968-CDS-H-paniculata_contig18618:3504..36271622929438.4491968-CDS-H-paniculata_contig18618:3504..3627Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18618 3505..3627 -
1691480861.5315328-CDS-H-paniculata_contig18618:3504..36271691480861.5315328-CDS-H-paniculata_contig18618:3504..3627Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18618 3505..3627 -
1622929438.47143-CDS-H-paniculata_contig18618:4543..47081622929438.47143-CDS-H-paniculata_contig18618:4543..4708Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18618 4544..4708 -
1691480861.5428984-CDS-H-paniculata_contig18618:4543..47081691480861.5428984-CDS-H-paniculata_contig18618:4543..4708Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18618 4544..4708 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18618.4603.1prot_H-paniculata_contig18618.4603.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig18618 773..4708 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig18618.4603.1

>prot_H-paniculata_contig18618.4603.1 ID=prot_H-paniculata_contig18618.4603.1|Name=mRNA_H-paniculata_contig18618.4603.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=352bp
MSKVERLCSTSLAEVGVAVEDFVDALQASRLHDVSTVVYEQLMALDDFVT
FKKLMVKRNVELELEAVRALQGQGVPICRENGDQELSYDDSEPHLKEAAT
EAELAPANGSKKTARRTTHDRQLKNAMDETLRELELMHKREAVEQAELEQ
AIAMSLALEKKRAKRTVQQKTTERGGGGVEHQDGNSDRASGARVCCGGQK
HEQSKVEEAKEIADALAEAKCDFSSGGVGKQLPEDLSTGQQLSANSADSK
ALPPVSRSRSGQCLAHFRVGLGGSTCVQDSDVESAGRRREARVASEKSRQ
FLEERRRAQEKLREQSDVSKEDITQREQHLKDLRDRIVQVKRAEREEEAS
KA
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mRNA from alignment at H-paniculata_contig18618:773..4708-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig18618.4603.1 ID=mRNA_H-paniculata_contig18618.4603.1|Name=mRNA_H-paniculata_contig18618.4603.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3936bp|location=Sequence derived from alignment at H-paniculata_contig18618:773..4708- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCAAGGTCGAGAGACTGTGCTCCACCAGCCTGGCAGAAGTGGGGGT
TGCGGTGGAAGATTTTGTGGATGCTCTCCAGGCCTCGAGACTTCATGATG
TTAGCACGGTGGTGTACGAGCAACTAATGGCGCTCGATGACTTCGTGACT
TTCAAGAAGCTAATGGTAAGTGTCACAACACGACAGATCCCCAGTATGGA
CTATGCTGTGGAAGTCGCACCGTCAGAGTGGGCATGCAATTATCGTTCTT
TTCCATACCCAATTCTGAAGGAGGGTAAAATCACATAGCGCGAAATGCAC
GGTAATTTTCGTTGGCAAAGCTTACATCCGGTGTCCACGGAATTTCAATG
ACTATCCATGAAATGCTCTTAACTATTAATATAAAATCCATGACCATTAA
AAGAGTGTCCATGAAGTGTCTGTGGAGTGTCCATGAAGTGTCCATCTATT
CCCATTGATTTGTCACAACCATCCATAAAGTGTATTCATGGACCTTCACG
GAGAGTTCATCGACAATTATTCATGTATATCCATGGTCATGGTACTATCG
GTGGATGTTTATGTGCTATACATAGATTTACTAAATTTCCTACGGCCTAA
AACGATCTCGAGGTACTACCTGTTCTTCTAACTTGACATACTGGAGCCGG
CGCGGCTTTGCATCTCCAAACCATTGGTTTCCTTCCTCGCTTCGAAAACC
TCATTGAAATGTAAACTTCGGAAAACCTCGCAAAAGAAACAAGAGTTTTC
TCTTGGGTTGTAAGCTGTGCCAAAGCTGCGAAACCTAGGAACAACGATCT
CTGGACGCACTAGTACACGAAATATTATTTGTAAGGTCGAAAAGCACCCC
CACGTCTACAGCACTGATTGAATGTTTGCGATACCTTCGCTCCTAATGGA
GTAACATACTGCCGTTTCATTGGGTGGATCACAATTGACACTATTCAGAG
AAGCCTTTCTCTTTGGCGACACTTTTGCTTAGAGCTGTGTGAAACGTGCG
GACAGCTTGACTCGATTTCTAGCCTTTGTTGACTTACGCGAAATTCGTAT
TAAAGTATGCCGTCGTGAACGTGCACGCCAGGTGAAGCGCAATGTGGAAC
TAGAGCTTGAAGCGGTGCGCGCATTACAGGGCCAAGGAGTACCGATCTGC
CGTGAAAACGGAGATCAAGAATTGAGTTATGACGACTCGGAACCCCATCT
CAAGGTACGGGCCACTAGGCTAACCCCTATCACACCAGTCTGTCATGTTT
ATGTGCGGGAGGCGCAACAACTACGTTTAGTTAATATGCTCTTCCTGCAG
TCTCAAGGCATAATGTCAATACTACAGTTCATTACCGTGGAGCAAGGTGT
TGGAGCTTGAAGCTCGTCCATAGAAGTGCGATGCGTGGATGGGACAAAAT
ACTGTGGTGTATTTGTGACCATAATCGACTATTAGTGCGGGACCTATCGA
CCATCGATACGTCGGAGGTGGAGTTCAAACTTCTACTCGTGGCTAATAAT
GGAATCTCAGCTGTGTGATCCACCCGGGCCGATGCTCCATGTGGAGATTA
TGGCGGCTTACCGATTGAACGTAGCTCATATTGACTTATACGATGACCTC
CATTTCGCAATATCTTATCGGACGCCATAATATTCATAATCCCGACCGCG
GCTAAAATATTATTTGGAAGTCAGGAAGCTGCAACAGAAGCCGAGCTTGC
ACCAGCAAACGGATCTAAGAAGACCGCGAGGAGGACCACGCACGATAGGC
AACTGAAAAATGCAATGGACGAGACCCTGCGGGAGCTAGAACTTATGCAC
AAGCGGGTATGTAAATGGAGATCGATCGACACTGATATATCTGCGGTCGC
TGGCATTTAGAGAGTCACATCAATATACACCTCTGATTGTCGAGGTCGAG
GAAGTCGCTGCAAAGGTATGCCTCGCGCAACGATAGAGGGGAGATCGGTC
ATAATCAACGAATTGTCAGGCGCATACCACAGAACGCATCCCCAGAGTTC
CTTTTTATAGTATCCCCGGCACAAGTTGCAACCGCCTCATTGTCCGATAT
AACGCCCAACAAAACGTTGTGTCACAACGCTGAGTAAACTATCCCTGAAG
AGGTGAAAAAGGTCACTTTTCCCTCCCCTCGAAGAACTTTCGGGTATAAC
CCCCCCTCTTAATCTCTTGCCGTCCCTATATCGTTGCATGATTTGTGCCT
GGGTATTGTTTTCTCTGGTTCATATGTTGGCTGGGGATGACAATACAGGG
TGCACCACATACACACCTCGGAGCCATTGATACCATCTGACGGCTTTGTG
AACTTAGTGCGAACTATCCAGTGCGAAGGGTTAAGTCACAAGCTATTGCA
TCAACGCTCTGATCCGCACGCTAACGGAAATACTTTACAAATTTGGTGGA
GGCATGTAACCTTGTTGCTCTTAGCTTTGCCTCCGTCCCTACGCTTTCTC
GCGGAATTGTACGCCACCGAGTAGGAAGCAGTGGAGCAAGCGGAACTAGA
ACAAGCGATCGCGATGTCTCTAGCTCTAGAGAAGAAACGAGCGAAGCGAA
CGGTGCAGCAGAAGACGACCGAACGCGGCGGCGGCGGGGTGGAGCACCAG
GATGGGAACTCTGTTGGAAACCGCCATTTCGAGGTGAAGGCAAAGGTTCG
GTACGGACAGGGACCATAAAACACGCCCAGATCATTCCAAAGACAGCACT
AATAAGCATTTAGCTTGTCCGTGCCACGTTGTGCAGTGCACTCCCACATT
GCAGTTCCTTTCAACCAAAGAGTACCTGATGCGTCTTCGTTGTGAGCACA
AACTACATCACAATCCTTGTTCTGTGTCCCCCCAAGCATGTTGGTCTCAA
CAATGTACACCGAATATACGACTTGCTTGTTGTACTGCGACGTGAACACG
GCAGTCCGACTGTAAGGAGGATCGGGCCTCGGGGGCACGCGTTTGCTGTG
GTGGGCAAAAACATGAACAGAGCAAGGTGGAAGAAGCGAAAGAAATAGCT
GATGCGCTCGCGGAGGCAAAGTGTGATTTCAGCAGCGGGGGGGTAGGAAA
ACAGCTGCCTGAAGATCTAAGCACCGGGTGAGAGATAGCTTGTCAGCATC
CATCCTGTCTTGCGCCTCGAAGTTTACAAAGATCATAGCGGTGGTGACTA
GCATTATCCGAGCACGTTTTCAACGACGTGCCTATCCCCTTTCTTGTTAT
TTCTATTGAAATGGCCTAAGCCATGGTGAACCGCCGCCCGAATACCGCCA
ACCGATAACCACGTCAAGCAGACAACAACTCAGTGCCAACAGTGCGGACT
CGAAGGCGCTTCCTCCTGTGTCCAGGAGTCGGTCCGGGCAATGTCTCGCT
CATTTTCGAGTCGGTCTGGGCGGGTCTACCTGTGTCCAGGATTCAGACGT
CGAGTCGGCAGGGCGACGAAGGGAGGCGCGGGTGGCGTCAGAAAAATCTC
GGCAGTTTCTGGAGGAGCGCCGACGCGCGCAGGAGAAGCTAAGAGAGCAG
GTGACATCAGAGTTCGACTTGCGCTATACGTGGCATTTTGATGAATATTG
AATATTCACCAAGTAGTTTGACTTAACGCACCAAACGATTGTAGTTTTCA
TGGTCATGTGGCGATTTTAGTGCTATTGTGCAGCGATGGATTTTTCCAGT
GCGTCTTTCGACCGTATGGGGTTCAAGTAGGAGGTAGCCAAGAGTATCTT
CTACTCTGCGTACTCTATATTTGAAACATTTTCGCAGTATTTCCTCTTTG
ATCTTGATGGCAAGACGGTACACGACGAACTATACCCCAGCACCTATAAT
GTTGTGACAACTATTAACTGTTCAGTCGGATGTTAGCAAGGAGGACATCA
CCCAACGGGAACAACACTTAAAAGATCTGCGCGACCGCATCGTGCAAGTG
AAGCGCGCGGAGCGTGAGGAAGAGGCCTCTAAGGCC
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Coding sequence (CDS) from alignment at H-paniculata_contig18618:773..4708-

>mRNA_H-paniculata_contig18618.4603.1 ID=mRNA_H-paniculata_contig18618.4603.1|Name=mRNA_H-paniculata_contig18618.4603.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2112bp|location=Sequence derived from alignment at H-paniculata_contig18618:773..4708- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCAAGGTCGAGAGACTGTGCTCCACCAGCCTGGCAGAAGTGGGGGT
TGCGGTGGAAGATTTTGTGGATGCTCTCCAGGCCTCGAGACTTCATGATG
TTAGCACGGTGGTGTACGAGCAACTAATGGCGCTCGATGACTTCGTGACT
TTCAAGAAGCTAATGATGAGCAAGGTCGAGAGACTGTGCTCCACCAGCCT
GGCAGAAGTGGGGGTTGCGGTGGAAGATTTTGTGGATGCTCTCCAGGCCT
CGAGACTTCATGATGTTAGCACGGTGGTGTACGAGCAACTAATGGCGCTC
GATGACTTCGTGACTTTCAAGAAGCTAATGGTGAAGCGCAATGTGGAACT
AGAGCTTGAAGCGGTGCGCGCATTACAGGGCCAAGGAGTACCGATCTGCC
GTGAAAACGGAGATCAAGAATTGAGTTATGACGACTCGGAACCCCATCTC
AAGGTGAAGCGCAATGTGGAACTAGAGCTTGAAGCGGTGCGCGCATTACA
GGGCCAAGGAGTACCGATCTGCCGTGAAAACGGAGATCAAGAATTGAGTT
ATGACGACTCGGAACCCCATCTCAAGGAAGCTGCAACAGAAGCCGAGCTT
GCACCAGCAAACGGATCTAAGAAGACCGCGAGGAGGACCACGCACGATAG
GCAACTGAAAAATGCAATGGACGAGACCCTGCGGGAGCTAGAACTTATGC
ACAAGCGGGAAGCTGCAACAGAAGCCGAGCTTGCACCAGCAAACGGATCT
AAGAAGACCGCGAGGAGGACCACGCACGATAGGCAACTGAAAAATGCAAT
GGACGAGACCCTGCGGGAGCTAGAACTTATGCACAAGCGGGAAGCAGTGG
AGCAAGCGGAACTAGAACAAGCGATCGCGATGTCTCTAGCTCTAGAGAAG
AAACGAGCGAAGCGAACGGTGCAGCAGAAGACGACCGAACGCGGCGGCGG
CGGGGTGGAGCACCAGGATGGGAACTCTGAAGCAGTGGAGCAAGCGGAAC
TAGAACAAGCGATCGCGATGTCTCTAGCTCTAGAGAAGAAACGAGCGAAG
CGAACGGTGCAGCAGAAGACGACCGAACGCGGCGGCGGCGGGGTGGAGCA
CCAGGATGGGAACTCTGATCGGGCCTCGGGGGCACGCGTTTGCTGTGGTG
GGCAAAAACATGAACAGAGCAAGGTGGAAGAAGCGAAAGAAATAGCTGAT
GCGCTCGCGGAGGCAAAGTGTGATTTCAGCAGCGGGGGGGTAGGAAAACA
GCTGCCTGAAGATCTAAGCACCGGGATCGGGCCTCGGGGGCACGCGTTTG
CTGTGGTGGGCAAAAACATGAACAGAGCAAGGTGGAAGAAGCGAAAGAAA
TAGCTGATGCGCTCGCGGAGGCAAAGTGTGATTTCAGCAGCGGGGGGGTA
GGAAAACAGCTGCCTGAAGATCTAAGCACCGGACAACAACTCAGTGCCAA
CAGTGCGGACTCGAAGGCGCTTCCTCCTGTGTCCAGGAGTCGGTCCGGGC
AATGTCTCGCTCATTTTCGAGTCGGTCTGGGCGGGTCTACCTGTGTCCAG
GATTCAGACGTCGAGTCGGCAGGGCGACGAAGGGAGGCGCGGGTGGCGTC
AGAAAAATCTCGGCAGTTTCTGGAGGAGCGCCGACGCGCGCAGGAGAAGC
TAAGAGAGCAGACAACAACTCAGTGCCAACAGTGCGGACTCGAAGGCGCT
TCCTCCTGTGTCCAGGAGTCGGTCCGGGCAATGTCTCGCTCATTTTCGAG
TCGGTCTGGGCGGGTCTACCTGTGTCCAGGATTCAGACGTCGAGTCGGCA
GGGCGACGAAGGGAGGCGCGGGTGGCGTCAGAAAAATCTCGGCAGTTTCT
GGAGGAGCGCCGACGCGCGCAGGAGAAGCTAAGAGAGCAGTCGGATGTTA
GCAAGGAGGACATCACCCAACGGGAACAACACTTAAAAGATCTGCGCGAC
CGCATCGTGCAAGTGAAGCGCGCGGAGCGTGAGGAAGAGGCCTCTAAGGC
CTCGGATGTTAGCAAGGAGGACATCACCCAACGGGAACAACACTTAAAAG
ATCTGCGCGACCGCATCGTGCAAGTGAAGCGCGCGGAGCGTGAGGAAGAG
GCCTCTAAGGCC
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