mRNA_H-paniculata_contig186.4597.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig186.4597.1 vs. uniprot
Match: A0A6H5J860_9PHAE (SUN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J860_9PHAE) HSP 1 Score: 276 bits (707), Expect = 7.360e-80 Identity = 168/375 (44.80%), Postives = 227/375 (60.53%), Query Frame = 3
Query: 48 LELQARAVEGKNSDHADLTIQIARAQDNLRNLQRATKDTLGELKTKLVEQGETLTYVREKLWRAREESIEEEASVNDAW---LETTLEENANQLNQMRDELQEQLEGKKEAVLSRSELESRLWEAAQLPSSHNDDSENGVDQRMDQLIRVVARDFIDRAVETTLQNSDISGGLVARGEGQECVSEEEVHELVEEAISRLDADGTGLADYANAAVGGSVRNSGNRGDEQELTSPTYSRGGFDWTVTGVESGIGPADSVISGDSSLGACWAMTGSSGRVTIQLSHDITVASVSVEHVSRLITFERDSAPKEFEVYGLRDVEDPNPVRLGSLFYDIDGSPIQTFGIEPLGTTFNIVQFRIKSNWGNPNYTCIYRLRVH 1163
LE +AV NS A LT ++ RAQ++LR+L R+ D LG + +L EQ T+ +R+ + R + + E + A LE+ L++N L ++ ++ V++ S+LE+ L AA PS S +G + IR +++ +D A++T + S G G G CVSE V E V+ AI +L ADGTG+ DYANAA+GG V S E S + + W GVE+G+GP +SVIS SSLGACWAM+GS G VTIQL ITV VSVEHVSR++T E SAPKE EV+G+R+ +D NP +LGS YD+DG PIQTF IEPLG F ++QF+I SNWGNP+YTC+YRLRVH
Sbjct: 157 LEALGKAVHEGNSRDAGLTTEVTRAQESLRDLHRSVTDELGSFQRRLEEQAGTMREIRDGMARVSQLAERREDRIAAAVHMKLESKLDDNLADLKDFYHTVEGHVDSLSPDVMTASDLEALLESAAAQPSERIGTSRDGDGDAAEHQIRALSKVAVDLAIKTRVLGSGSRDGSDESGGGGGCVSEGVVREEVDVAIGKLMADGTGMRDYANAALGGKVLTSKGMVSETYTPSSWWGPSRY-WHGAGVENGVGPVESVISEGSSLGACWAMSGSEGLVTIQLPEKITVDGVSVEHVSRMVTTESGSAPKEIEVWGMRNKKDNNPAKLGSAVYDVDGRPIQTFPIEPLGVQFKLIQFKILSNWGNPDYTCLYRLRVH 530
BLAST of mRNA_H-paniculata_contig186.4597.1 vs. uniprot
Match: D7FIC3_ECTSI (SUN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIC3_ECTSI) HSP 1 Score: 267 bits (682), Expect = 8.900e-78 Identity = 167/383 (43.60%), Postives = 226/383 (59.01%), Query Frame = 3
Query: 48 LELQARAVEGKNSDHADLTIQIARAQDNLRNLQRATKDTLGELKTKLVEQGETLTYVRE------KLWRAREESIEEEASVNDAWLETTLEENANQLNQMRDELQEQLEGKKEAVLSRSELESRLWEAAQLPSSHNDDSENGVDQRMDQLIRVVARDFIDRAVETTLQNSDISGGLVARGEGQECVSEEEVHELVEEAISRLDADGTGLADYANAAVGGSVRNSGNRGDEQELTSPTYSRGGF-----DWTVTGVESGIGPADSVISGDSSLGACWAMTGSSGRVTIQLSHDITVASVSVEHVSRLITFERDSAPKEFEVYGLRDVEDPNPVRLGSLFYDIDGSPIQTFGIEPLGTTFNIVQFRIKSNWGNPNYTCIYRLRVH 1163
LE +AV NS A LT ++ RAQ++LR+L R+ D LG + +L EQ T+ VR+ +L RE+ I A+ LE+ L++ L ++E ++ V++ S+LE+ L AA PS D S +G + IR +++ +D AV+T + G CVSE V E V+ AI +L ADGTG+ DYANAA+GG V S + + S TY+ + W GVE+G+GP +SVIS SSLGACWAM+GS G VTIQL ITV VSVEHVSR++T E SAPKE EV+G+++ +D P +LGS YD+DG PIQTF IEP G ++QF+I SNWGNP+YTC+YRLRVH
Sbjct: 37 LEALGKAVHEDNSGDAGLTTEVTRAQESLRDLHRSVTDELGSFQRRLEEQSGTMREVRDGTARVSQLAERREDRI---AAAVHMKLESKLDDILADLKDFYHTVEEHVDSLSPDVMTASDLEALLESAAAQPSERTDTSRDGGGDAAEHRIRALSKAAVDLAVKTRVLGGGSRDGXXXXXXXXGCVSEGAVREEVDVAIGKLMADGTGMRDYANAALGGKVLTS------KGMVSDTYTPSSWWGPSRYWHGAGVENGVGPVESVISEGSSLGACWAMSGSEGLVTIQLPKKITVDGVSVEHVSRMVTTESGSAPKELEVWGMKNKKDKKPAKLGSAVYDVDGRPIQTFRIEPPGEQIELIQFKILSNWGNPDYTCLYRLRVH 410
BLAST of mRNA_H-paniculata_contig186.4597.1 vs. uniprot
Match: A0A482W613_9CUCU (Sad1 UNC domain containing protein n=1 Tax=Asbolus verrucosus TaxID=1661398 RepID=A0A482W613_9CUCU) HSP 1 Score: 139 bits (351), Expect = 3.080e-32 Identity = 94/247 (38.06%), Postives = 138/247 (55.87%), Query Frame = 3
Query: 456 VDQRMDQLIRVVARDFIDRAVETT--LQNSDISGGLVARGEGQECVSEEEVHELVEEAISRLDADGTGLADYANAAVGGSVRNSGNRGDEQELTSPTYSRGGFDWTVTGVESGIGPADS---VISGDSSLGACWAMTGSSGRVTIQLSHDITVASVSVEHVSRLITFER--DSAPKEFEVYGLRDVEDPNPVRLGSLFYDIDGSPIQTFGIEPLGTTFNIVQFRIKSNWGNPNYTCIYRLRVHNTYA 1175
+++R+ L + + +D+ D ++E T L + LV R ++EE++ ++V+ + DAD TGL DYA ++GG + + + +Y G +V G+ P++S VI + G CWA G + I+L+ I V + S+EHVSRL+ E DSAPKEFEVYGL + D PV++G YD DG PIQ F + G F +V+ RIKSN GNPNYTC+YR RVH T +
Sbjct: 136 LERRLFALTQNLTKDY-DVSIENTAKLVMERVVTRLVDRRFDSGSITEEQIKKVVKSTLMIYDADKTGLVDYAMESMGGHIVTT--------RCTESYHTGTAVISVLGIPLWY-PSNSPRIVIVPGINPGECWAFQNFPGFIVIKLATRILVEAFSLEHVSRLLVPEGRIDSAPKEFEVYGLDNENDKEPVKIGEYVYDYDGDPIQYFAAQQHGLIFTMVEVRIKSNHGNPNYTCLYRFRVHGTIS 372
BLAST of mRNA_H-paniculata_contig186.4597.1 vs. uniprot
Match: A0A8J6H8V3_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6H8V3_TENMO) HSP 1 Score: 133 bits (335), Expect = 4.160e-28 Identity = 79/199 (39.70%), Postives = 111/199 (55.78%), Query Frame = 3
Query: 585 VSEEEVHELVEEAISRLDADGTGLADYANAAVGGSVRNSGNRGDEQELTSPTYSRGGFDWTVTGVESGIGPADSVISGDSSLGACWAMTGSSGRVTIQLSHDITVASVSVEHVSRLITFER--DSAPKEFEVYGLRDVEDPNPVRLGSLFYDIDGSPIQTFGIEPLGTTFNIVQFRIKSNWGNPNYTCIYRLRVHNTYA 1175
+S+E++ ++V+ A+ DAD TGL DYA +GG + + R E + S G + + VI+ + G CWA G + I+L+ + + + SVEHVSRL+ E DSAPKEFEV+GL D V++G YD DG PIQ F + G F +V+ R+KSN GNPNYTC+YR RVH T +
Sbjct: 1295 ISDEQIRKVVQSALRIYDADRTGLVDYAMEPLGGEIVTT--RCTESYSGTAVISVLGIPVWYPSISPRV-----VITPGINPGECWAFQNFPGFLVIKLAARVRLEAFSVEHVSRLLVPEGKIDSAPKEFEVFGLNSENDREAVKIGEYVYDYDGDPIQYFAAQETGLVFTMVEIRVKSNHGNPNYTCLYRFRVHGTLS 1486
BLAST of mRNA_H-paniculata_contig186.4597.1 vs. uniprot
Match: A0A8K0GFV5_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0GFV5_9COLE) HSP 1 Score: 131 bits (329), Expect = 6.650e-28 Identity = 87/272 (31.99%), Postives = 146/272 (53.68%), Query Frame = 3
Query: 375 LSRSELESRLWEAAQ-LPSSHNDDSENGVDQRMDQLIRVVARDFIDRA--VETTLQNSDISGGLVARGEGQECVSEEEVHELVEEAISRLDADGTGLADYANAAVGGSVRNSGNRGDEQELTSPTYSRGGFDWTVTGVESGIGPADSVISGDSSLGACWAMTGSSGRVTIQLSHDITVASVSVEHVSRLIT--FERDSAPKEFEVYGLRDVEDPNPVRLGSLFYDIDGSPIQTFGIEPLGTTFNIVQFRIKSNWGNPNYTCIYRLRVHNTYA 1175
+++ +LE L Q L S++ D N MD+++ ++++ R ++T +Q + G L + +++E + ++V ++I+ DAD TGL DYA + GG + ++ Q T+ G W + +VI+ + G CWA G + I+LS + + + S+EH+S+++ + DSAPKEF VYGLR+ D P LG YD +G+ +Q F ++ G F+I++ RI SN GNPNYTC+YR RVH + +
Sbjct: 403 VAKQDLEMHLANLTQHLKSNYEDMIRNNEKLIMDKVMAEISKELNYRIENIQTKIQKHETVGELKL-----DALTDEHIRKIVMDSIALYDADKTGLVDYALESAGGHILSTRCTESYQARTAVLSVFGIPLWYPSNTPR------TVITPGVTPGECWAFQNFPGFLLIKLSAPVKITAFSMEHISKMLAPNGKIDSAPKEFSVYGLRNESDKEPTLLGKYMYDYNGASLQYFDVQNDGLIFDIIELRIHSNHGNPNYTCLYRFRVHGSLS 663
BLAST of mRNA_H-paniculata_contig186.4597.1 vs. uniprot
Match: A0A7F5RMC3_AGRPL (SUN domain-containing protein 2 n=1 Tax=Agrilus planipennis TaxID=224129 RepID=A0A7F5RMC3_AGRPL) HSP 1 Score: 132 bits (331), Expect = 7.170e-28 Identity = 96/273 (35.16%), Postives = 144/273 (52.75%), Query Frame = 3
Query: 375 LSRSELESRLWEAAQ-LPSSHNDDSENGVDQRMDQLIRVVARDFIDRA--VETTLQNSDISGGLVARGEGQECVSEEEVHELVEEAISRLDADGTGLADYANAAVGGSVRNSGNRGDEQELTSPTYSRGGFDWTVTGVESGIGPADS---VISGDSSLGACWAMTGSSGRVTIQLSHDITVASVSVEHVSRLI--TFERDSAPKEFEVYGLRDVEDPNPVRLGSLFYDIDGSPIQTFGIEPLGTTFNIVQFRIKSNWGNPNYTCIYRLRVHNT 1169
+++++LESRL Q L S+ + EN MD + ++ + DR +E T+Q D G L + +++E V +V+E + DAD TGL DYA GG V ++ S TY G +V G+ P ++ VI+ + G CWA G + I+L+ I + + S EH+S+ + + DSA K+F VYGL++ D P+ +G+ YD DG +Q F E G TF I++ R+ SN GNPNYTC+YR RVH T
Sbjct: 589 VAKNDLESRLANLTQNLKSNFDHLIENSGHVIMDDVTTKISDELHDRLEKLEQTMQQKDFRGELTV-----DTLTDEYVKGIVKEVLEIYDADKTGLVDYAMEPSGGQVLST--------RCSETYHAGTAVISVLGIPLWY-PTNTPRTVITPGVNPGECWAFQNFPGFLVIKLAAPIKIDAFSYEHISKKLMPNGKIDSALKDFAVYGLKNETDTEPILIGTYHYDHDGPSLQYFAAESHGLTFEIIELRVFSNHGNPNYTCLYRFRVHGT 847
BLAST of mRNA_H-paniculata_contig186.4597.1 vs. uniprot
Match: UPI000C251E21 (uncharacterized protein LOC111510856 n=1 Tax=Leptinotarsa decemlineata TaxID=7539 RepID=UPI000C251E21) HSP 1 Score: 131 bits (329), Expect = 9.890e-28 Identity = 77/197 (39.09%), Postives = 110/197 (55.84%), Query Frame = 3
Query: 585 VSEEEVHELVEEAISRLDADGTGLADYANAAVGGSVRNSGNRGDEQELTSPTYSRGGFDWTVTGVESG--IGPADSVISGDSSLGACWAMTGSSGRVTIQLSHDITVASVSVEHVSRLIT--FERDSAPKEFEVYGLRDVEDPNPVRLGSLFYDIDGSPIQTFGIEPLGTTFNIVQFRIKSNWGNPNYTCIYRLRVH 1163
+SEE V +V+ A+ DAD TGL DYA +GG + + + Y G +V GV + ++I+ + G CWA G I+LS I V + S+EH+S+L+ E DSAPK+FEVYGL D +D P++LG Y+ +Q F ++ +G F I++ R+ SNWGNPNYTC+YR RVH
Sbjct: 568 ISEEHVKRIVKNALLIYDADKTGLVDYAMETMGGQILTT--------RCTENYHYGKAVVSVLGVPLWYPVNSPRTIITPSINPGECWAFQNFPGFAVIRLSKRIKVEAFSLEHISKLLVPNGEIDSAPKQFEVYGLTDQDDKEPLKLGEYVYEDHKESLQFFPVQNVGHIFEIIELRVLSNWGNPNYTCLYRFRVH 756
BLAST of mRNA_H-paniculata_contig186.4597.1 vs. uniprot
Match: A0A7J6BEZ8_AMEME (SUN domain-containing protein n=3 Tax=Ictaluridae TaxID=7996 RepID=A0A7J6BEZ8_AMEME) HSP 1 Score: 130 bits (327), Expect = 1.010e-27 Identity = 119/363 (32.78%), Postives = 180/363 (49.59%), Query Frame = 3
Query: 147 RATKDTLGELKTKLVEQGETLTYVREKLWRAREESIEEEASVNDAWLETTLEENANQLNQMRD---------ELQEQLEGKKEAVLSR-SELESRL--WEAAQLPSSHNDDSENGVDQR--MDQLIRVVARDFIDRAVETT--LQNSDI--SGGLVARGEGQECVSEEEVHELVEEAISRLDADGTGLADYANAAVGGSVRNSGNRGDEQELTSPTYSRGGFDWTVTGVESGIGPADS---VISGDSSLGACWAMTGSSGRVTIQLSHDITVASVSVEHVSRLI--TFERDSAPKEFEVYGLRDVEDPNPVRLGSLFYDIDGSPIQTFGIEPLGT-TFNIVQFRIKSNWGNPNYTCIYRLRVH 1163
R +D L E+K L + GE + E L ++ +V+ A EE+A NQ+ D E+L + +A S+ S+L++ L W QL S +D+SE+ R + + + + + +DR + + D+ + G + EG VS +V +V A+S ADG G+ADYA + G SV N+ + S S GF P++S VI + G CW GS G + I LSH + + V++EH+ R++ T DSAPK+F VYG+ + ED + LG+ YD DG P+QTF ++ T F +V+ RI SNWG+P YTC+YR RVH
Sbjct: 283 RDLEDVLKEIKL-LKQDGEKQKHTYEMLQTDVQDLKIRTRNVDSAHRSLIREESAGMQNQISDLRLDVSRLHSASERLSRRMDAQESQNSKLKTELSDWLLQQLQLSGSDNSEHDAMTRPELQRALEDLEKKILDRLGQEREDKERMDVWRTVGETLQEEGVGAVSVTDVERIVHRALSLHRADGIGMADYALESSGASVVNT-RCSETYHTRSACISLFGFPLWY--------PSESPRTVIQPELYPGKCWPFRGSEGFLVIALSHPVQITRVTLEHLPRVLSPTGHIDSAPKDFAVYGMINEEDKDGKLLGTFVYDQDGEPVQTFQVQHSRTEVFGLVELRILSNWGHPEYTCVYRFRVH 635
BLAST of mRNA_H-paniculata_contig186.4597.1 vs. uniprot
Match: A0A6J2X2Z0_SITOR (uncharacterized protein LOC115874360 isoform X1 n=3 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2X2Z0_SITOR) HSP 1 Score: 131 bits (329), Expect = 1.190e-27 Identity = 86/220 (39.09%), Postives = 124/220 (56.36%), Query Frame = 3
Query: 522 TTLQNSDISGGLVARGEGQECVSEEEVHELVEEAISRLDADGTGLADYANAAVGGSVRNSGNRGDEQELTSPTYSRGGFDWTVTGVESGIGPADS---VISGDSSLGACWAMTGSSGRVTIQLSHDITVASVSVEHVSRLITFER--DSAPKEFEVYGLRDVEDPNPVRLGSLFYDIDGSPIQTFGIEPLGT-TFNIVQFRIKSNWGNPNYTCIYRLRVH 1163
TT++N+++ GG+ SE+E+ ++V+ ++ DAD TGL DYA ++GG + + + Y G ++ GV P++S I + G CWA G V I+LS + + + S+EH+SRL+ E DSAPKEFEVYGL D PV LG+ YD DG P+Q F I+ G F++++ RI SN GNPNYTC+YR RVH
Sbjct: 620 TTVKNTEVVGGI----------SEDEIKKVVKGVLAIYDADRTGLVDYAMESMGGQIVTT--------RCTELYHYGKAVVSILGVPLWY-PSNSPRTAIRPGMAPGECWAFQNFPGFVVIKLSARVRLEAFSLEHISRLLVPEGKIDSAPKEFEVYGLVQENDREPVLLGTYTYDYDGEPLQFFPIQTPGLQVFDMIELRIVSNHGNPNYTCLYRFRVH 820
BLAST of mRNA_H-paniculata_contig186.4597.1 vs. uniprot
Match: A0A834HUT1_RHYFE (SUN domain-containing protein n=1 Tax=Rhynchophorus ferrugineus TaxID=354439 RepID=A0A834HUT1_RHYFE) HSP 1 Score: 130 bits (328), Expect = 1.500e-27 Identity = 77/198 (38.89%), Postives = 115/198 (58.08%), Query Frame = 3
Query: 585 VSEEEVHELVEEAISRLDADGTGLADYANAAVGGSVRNSGNRGDEQELTSPTYSRGGFDWTVTGVESGIGPADS---VISGDSSLGACWAMTGSSGRVTIQLSHDITVASVSVEHVSRLITFER--DSAPKEFEVYGLRDVEDPNPVRLGSLFYDIDGSPIQTFGIEPLGTTFNIVQFRIKSNWGNPNYTCIYRLRVH 1163
+SE ++ ++V+ ++ DAD TGL D+A ++GG + + + Y G ++ GV P +S +I + G CWA G V I+LS + + + S+EH+SRL+ E DSAPK+FEVYGL++ D NP+ LG+ YD +G P+Q F I G F++V+ R+ SN GNPNYTC+YR RVH
Sbjct: 613 LSENDIKKVVKNVLAIYDADKTGLVDFAMESMGGQILTT--------RCTELYHSGKAVVSILGVPLWY-PRNSPRTIIRPSIAPGECWAFQNFPGFVVIKLSTKVKLEAFSMEHISRLLVPEGKIDSAPKQFEVYGLQEENDRNPILLGTFTYDYNGDPLQFFPINSFGLIFDMVELRVTSNHGNPNYTCLYRFRVH 801 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig186.4597.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig186.4597.1 >prot_H-paniculata_contig186.4597.1 ID=prot_H-paniculata_contig186.4597.1|Name=mRNA_H-paniculata_contig186.4597.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=382bp MKQLELQARAVEGKNSDHADLTIQIARAQDNLRNLQRATKDTLGELKTKLback to top mRNA from alignment at H-paniculata_contig186:36005..46780- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig186.4597.1 ID=mRNA_H-paniculata_contig186.4597.1|Name=mRNA_H-paniculata_contig186.4597.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10776bp|location=Sequence derived from alignment at H-paniculata_contig186:36005..46780- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig186:36005..46780- >mRNA_H-paniculata_contig186.4597.1 ID=mRNA_H-paniculata_contig186.4597.1|Name=mRNA_H-paniculata_contig186.4597.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2292bp|location=Sequence derived from alignment at H-paniculata_contig186:36005..46780- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |