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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 487 |
| Cds size | 408 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1858.4588.1 >prot_H-paniculata_contig1858.4588.1 ID=prot_H-paniculata_contig1858.4588.1|Name=mRNA_H-paniculata_contig1858.4588.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp
MKKNQANQQRVAGGGHELSSGPNAREGILDMSNKDKGLENALRGVLVALQ
RRAQSLNPAYLIFCVRFVIAAVYALPKGVGRETAGVLARRAVHDLTGAHD
KRSRLLDPELGQRDAQDDSIWRRNRCYAVWTGKVA* back to topmRNA from alignment at H-paniculata_contig1858:14453..20088- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1858.4588.1 ID=mRNA_H-paniculata_contig1858.4588.1|Name=mRNA_H-paniculata_contig1858.4588.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5636bp|location=Sequence derived from alignment at H-paniculata_contig1858:14453..20088- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAGCTGAGAGCAGTGCTACGGCAAGCAGCAGCAGGAATGACGTTATGAA
GAAGAACCAGGCCAATCAACAGAGGGTAGCGGGCGGAGGACATGAGCTAT
CATCGGGCCCAAACGCACGCGAGGGCATCCTGGACATGAGCAACAAGGAC
AAGGGATTGGAGAACGCGCTTCGAGGTGTACTCGTGGCCCTACAGAGGAG
GTAAAATTTGTGCTCCATACATACTTGTGCATTATGCTATGGCTTCCGTG
GTATTGCGTTGATGATTGAATATTGCTGTTACAATTAGAGGACTCTCGTT
TATTTTGATCCAGCTGCATGTGTCAGGCTGTGATGGATCGACGAGGCATT
CCTAATCTCCATGTTTCGACTGTAACAGTAACCAAATATAATAGTAGTAA
CCAGTACAATTGTGTGCTCTAGAGTCTTGCGTATTTAGAGCAAAACACAC
ATACACACACACACACACACACACACACACACACACACGTCTGTATGTGG
AGTTATGGGTTCGCACACCCTGGCCCTGGGCTTCCTCTTTTGACTACTAG
TAGACTACATGCATGCGAGGGGTGATATAGACCGCACATGTTCTCAACAT
CAAGCCTTGAGTGATTATGACATCCATCAGCCAATGGTTGAGCTGTTCTG
TGTCCAAGTTGTCTGTGTATTATCGAGTCAGGGGAGAGAGTCTCGCCGCA
TGACAACTAGTAGCATCGCATATAAGAGACGATTGGATTGTTGAGATCAT
GGGCCCAACCAAGTTTAGAGCAATCCAAGGGGAGAACTGCAGTACTGGGT
TATATTTTTTTGCGGATGTAGTCAATCTCTGGGCCTGATGGAAACAGTAT
TGTGCTGAAGCATTTTGTCTAGGAAGTGATACGTGTCATGTTGTCTGTAT
CTTTCTTTCAGAAAACGAAAAAAGAGGAGACTGTTTGTTCAACTCGAAAC
GGAACATTTGCACGGTGCTATTAACGTCCTGAGAGGTTCACATGCCCACC
CGACATACATAAAGGCAAAGCAGAGCCAACATCAAAGCCGCTTTGAGGGG
GTAGAACTTGTTGAGGTTCCCACCCCCGCCCCCGGGACAGAGAGAGACAG
AGATATAGGGCAGAGGGTGTAGAAGGCAGTGGCTATTAACGTTCTGAAAG
GTTCAAATGTCCACACGACCTATGCAGACGTAAGGCAAAGCACCGTCAAC
ATCAAAGCCGCTTTGAGGGGTGTGGAACTTGTCGAAACCCCACCCTCGTC
CCCGGGGCAGAGAGAGTCAGAGAGATACAGCAGAGGGTGTACAAGGCAGG
GGGAGAGCGATGGGTATTGCCTACGTCGAAGCTAGTGATAACGGGTAGTA
GAGACAACGGCCAACAATAAATGTTGGTGGCGCATACTGCTTTCGACTGG
AGTCAGACAGCGCCGTTGCCTTCTCCCGACGGATCCTGCGCCTCCTGCGG
TGAGACAATTTGAGCGTAAATACAATGAAGGCTGTGGGCATTTCTGGAGC
TCAGCGTGCTGTCATCGTTGCACTGTCATTGTGTGACATATTGAAGCGGT
GTGCACAGTACAGTAATCAGCTAGTAGATGACCACCCAGAACTTGCTCGC
TGATCGCTAAATAGGGTCGGTTGTGTTTTTATTATCCGGCAAGAGTGGAG
CTGACAGTCCCGCCAAGCATCAATCCCGAACCCTTTTACCTTGCTTTAAG
ATTTCATAAGACCGAATGCCTTGCGACAACAATGGAACTACCGACTGTGT
GTACTATAATTTACGAAGAGGATGCGAGTAACAGAAAAACGTCGCTATTT
GCTATGTCCGTTTGTCACTTTGATGTCGCTGCCCTTCTTGACAGCAAAAT
TGTCTCAGATATTTGTTGGCAGCTGGCAGCATCCTCAGCCCTGCTGAGCG
AACCAGCCTATCCATATCTAACCATGTACTTTACAACAGTACTACATGCA
GCACTGTCTGGCTGAACAGTGGTGGCTGCTGACTGTCTTCGTGATCACAG
GAAAAAACGGCACATGACAAATTTCAAGCGCTGTATCTACCGTACCTATC
TCTGCAGTATGTACGTACGTACTGTCTGTACTGGGGGCTGCCTATCTGAT
AAATATTTCACGTGCGGTCAGTATTGTAGAGACAATAGAGGAGATGCCGA
TTGCTACATACTAAAAAGTATTAGGGGGTGGGAACCGGCGCTAAAATGGC
ATTAAGCATCTCTGCCCATCGTCGTTAGAACTCGAACAATTTCCTCATCA
CAACACCACTACACATTGGAACCACTGTAATTCCAGGAGTATTACATTTG
CATCTACGTGTCTACGATACTCAAGATCTACCTTTCGATGTACGGTACAG
CACTCTACATGAGTAATGTGGTCTGCCTGTACGAAAGTGGTCGCCGTCAA
AACGAAAACAGCAGGAGCCGCTGTGCGGTCGCCAGTTGCAGTGCCGATGC
CAGCACCGGCATCTATATGGGGTCATTCTTAACCCTCTTGGGTGCCCGAA
CCCGAACCCATCTACAGACAGTGAGTGAGGCTGTGTCTCACCCGCTAGCA
GCGCGGCACTTGGTCATCATCCAATTAAGTCCTTGGCTATGCTCGAAAGC
TTCTACTTATACAATGTATTCGATACTTGATGGATGATTTATTGGTATAA
CACCAGGTACTGGTTTACAGTACGAATGATTGGTGAACCAAACTTAGTAG
CGATATTTCGAAATGTTTATCACGTAACACAATCAAGAAACAAACGGAAA
CGAAAAACGAAATATTGTCGTGTCATGTATCGTTTTCGTTTCGATTTCTT
ATTTTTTTCGGAGTCCGAGAAAACATGCGGCATGATGAATGAAACACTAA
CTAAATACCAACGAACAGGTATCGTGCACAAATTATGGCCCTTCCCTATA
GGGCACCTTTTTTGTAAGCTCTGATTTTTCACAGCTGAAAACATTTTCAC
TCTTGCCTCGTGATTTCGGACCTATTTTTGTGCAACTTTGGACATGAAAG
AAAATACCCACGCCTATCCATTCGATTTGCGAGTATTATTAGCAGTCGTG
GATGGTCCGGGGGATATATAATACACGAGCTCATTCTGAAATTCAGGCCA
ATACCTTGTCATTTTCGTGGTGAATATGCCAATTATTCGTTTTTGTCCGG
CGGGTGAGAAATTGTCTTCACCCACAGACTCTCTTTAATCCCAACTTTAT
GGTAATCCATAATCCACCCCGCCTACAACTCGAAGCACGCTTCGCGAAAC
CGGTCGATTACAGAGCATTGTGATGAGGCTCCTATACCTCTCTGTGATAT
CGTTAACACGTAGATTATTGGCTATGGTTATCCTCTAAGACTCACGTGTA
TTAGCTCTCCCAGTCGTCTTTGATGCCAAACCCAAACGTTTGCGTAACAA
TGATTACCCACGGGAAGCGATCATCCTAACCCAGAAACTACAGCTGCATA
TTATAGTTCCTGTGTGAACCATAGCATTCTCTTCTCAAACCCGGAATCAT
CCCAACCGATATAAAACCAAGTGGAACCGTTAAAAGACATACGTGCTGGT
TCTGGTCTAACCGGCACAACATTTCAATAACCACGCTAAGAATTATGTTG
TCTTCCTACTCTAGCTACTAGCGTCTCTGACCCTTATGACAGCATCCGTT
TGTGCGTGGTGTATGATGTGGAGAACGACAAGCCTAGGCCAAAAGCCCAT
CCGCAACAGCACCGAAGAACTGGACACCTCGTTGTGGTGGAACATGCGTG
ACATTTGAATGTATAATTTTCCCTGTTCCTCCACCGCCAATTTATTTCTG
ATTGCTATTTTTTCTGCGGCCTGGCTATACCTTGCACATAAACGTGTTTT
CTTCTTGCAAATACAAATGAAGGCCAAAAACCTCTCACGATAAGAAGTGG
TCTCTGTATGAGGTCGAAATTTGGAATTCAACATGATGGCTCGAGAGGGC
GTTAAACATACCGTTGGGGAACTGAACCGTTCGTGCAGATCCGGAAAATT
GCCCACACCCTGAATAAATATCTAGCTTTTCAGGACGAAATCGTAGATGA
AGGAAAAAATTAGAGAATACTGGTGCACATTATTTATTAAATCATGTCAG
CTATTATTATCATCTCTAAACCCTCAGTTCATCCAGAGGGAGGCCGTAAT
CGTAACCGCAAAATGTATTGACAGATATGCATATAGACAATTTTAACATA
GAATAATGTGGTACATATTTCCAGATATCGTTCATAGATTGAGTTTGGTT
CAAAGCCGAGGTCACCTAATAGGGGTGTGTGGAGTCTCTCACTTTTTTTT
CACTTGATTCATTGCTTTGTTGCCTAGCCTATTGTGCACTGCTGTAGTAC
CTACTGACTCCATGTACAAGACTTTTACGTGTATATTTGTTTCGTCTCCA
ACTCGACGCGAAAACGCCAGTGCCCTTTGGCGCATGGGGTTACTCTGCCT
GTTTGGCCTCTTATTGGCAGTTTTTCATGTTTTGTATTGTTGCGTGCTCA
ACCCGATGGGCCCACCAATTTTCCGCCGGTCCTGTAAGTGGCGGCATAGT
GGCAGCGCTTTTATTGTTTGTCGCTCTATCGTAGTGAGAAGAGTGTTCTA
TGTTTCACAGATGCTACCAACTTGCTCTTGAACGCTGTTCACGCTGACAT
GTGTGTTCCGGGTGGCATATGACTTGTAACGTAGCTCGAAGGTATAGATT
TAGTCAAATCATCACGCATCACAACCAATCCCTTTTTGGTGTATGCTTGA
ATTATTGTAATCATGACTAAAAGCGCCTTAACTGTGTTACCAACACCACG
TTAACCCAGTTGCACTGGCTATGTCTGTGTGAGGGGTTTTCAACGCGTCA
TGCACTTTCGGTTCACCTTGAAAAGTCGTGGTCAACACGCTACTCATACT
GAAGTACATCTCTAGAGCTGACAACGGAGACCTCAAGATCTGTGAAACTT
GTAATGGAGTCGGTGCTGAGTGCACAGGTCTGTAGTCTATACCCCGTTGC
TTTTCCCGTGACAGTGACATAAGTCGTCTTGTTTTTTCGATCACGCGTGC
GCAAAGAATTGCAAACGCAGTACACGCGGTGTTGACTACGGCGGCGGCGT
GTCACTCTAAAACCGGCTACTGTATATACGAGCAATATACTGCAAGTGAG
CGTGTAGTTCTGAGCCTGTCCAACCTATGCCCCTGTCTCCTCATTCCGCG
TGTGTGGTCGTTGTACGATACGCACACTCTCACGCATTCGTTTTTGGTGC
TTGCGTATTGCAGGGCACAGTCGCTTAACCCGGCCTACCTCATCTTCTGC
GTACGTTTTGTAATCGCGGCGGTGTACGCTTTGCCGAAGGGCGTCGGGCG
GGAGACAGCTGGTGTCCTGGCCAGACGAGCCGTCCACGATCTGACGGGGG
CCCATGACAAGAGGGTGGGCATCCGCAAGGGCGGAAACGCAAACCCGGTG
TTGGGGATGCGAAAGACCCACGAGCATGCGCCTCGTGTCTTGTCTGAGAG
AGTCGTCTCTTGGATCCAGAACTGGGCCAGCGCGATGCTCAAGACGACTC
CATTTGGCGACGCAATCGTTGCTATGCAGTATGGACTGGCAAAGTTGCCT
GATCCCATAATCGTCGACGTCAAGACGATCGAGTCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig1858:14453..20088- >mRNA_H-paniculata_contig1858.4588.1 ID=mRNA_H-paniculata_contig1858.4588.1|Name=mRNA_H-paniculata_contig1858.4588.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=816bp|location=Sequence derived from alignment at H-paniculata_contig1858:14453..20088- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGAAGAACCAGGCCAATCAACAGAGGGTAGCGGGCGGAGGACATGA
GCTATCATCGGGCCCAAACGCACGCGAGGGCATCCTGGACATGAGCAACA
AGGACAAGGGATTGGAGAACGCGCTTCGAGGTGTACTCGTGGCCCTACAG
AGGAGATGAAGAAGAACCAGGCCAATCAACAGAGGGTAGCGGGCGGAGGA
CATGAGCTATCATCGGGCCCAAACGCACGCGAGGGCATCCTGGACATGAG
CAACAAGGACAAGGGATTGGAGAACGCGCTTCGAGGTGTACTCGTGGCCC
TACAGAGGAGGGCACAGTCGCTTAACCCGGCCTACCTCATCTTCTGCGTA
CGTTTTGTAATCGCGGCGGTGTACGCTTTGCCGAAGGGCGTCGGGCGGGA
GACAGCTGGTGTCCTGGCCAGACGAGCCGTCCACGATCTGACGGGGGCCC
ATGACAAGAGGGGCACAGTCGCTTAACCCGGCCTACCTCATCTTCTGCGT
ACGTTTTGTAATCGCGGCGGTGTACGCTTTGCCGAAGGGCGTCGGGCGGG
AGACAGCTGGTGTCCTGGCCAGACGAGCCGTCCACGATCTGACGGGGGCC
CATGACAAGAGGAGTCGTCTCTTGGATCCAGAACTGGGCCAGCGCGATGC
TCAAGACGACTCCATTTGGCGACGCAATCGTTGCTATGCAGTATGGACTG
GCAAAGTTGCCTGAAGTCGTCTCTTGGATCCAGAACTGGGCCAGCGCGAT
GCTCAAGACGACTCCATTTGGCGACGCAATCGTTGCTATGCAGTATGGAC
TGGCAAAGTTGCCTGA back to top
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