mRNA_H-paniculata_contig18579.4587.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig18579.4587.1
Unique NamemRNA_H-paniculata_contig18579.4587.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig18579.4587.1 vs. uniprot
Match: D7G297_ECTSI (Formaldehyde dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G297_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 3.330e-91
Identity = 143/174 (82.18%), Postives = 154/174 (88.51%), Query Frame = 1 
Query:    1 GVMPDGTSRFSIDGKPIYHFMGCSTMSEYTVISEISAAKVSDDANLEKARIESASEKGVCLFGCGVSTGFGAVMNTCNVQSGATVAVFGLGAVGLAAVQAAKARGASRIFAIDLNEEKFGLAKGLGATDCLNPSASDVPIQQAAHRGWGESCVIGVAAAGHEISTRPFQLVTGR 522
            GVMPDGT+RFSIDGKPIYHFMGCSTM+EYTVISEISAAK+SDDA+LEK          VCLFGCGV+TGFGAVMNTC+V+ G+TVAVFGLGAVGLAA+QAAKAR ASRIFAID N  KF LAK LGATDCLNP  S+ PIQQAAHRGWGESC+IGVAAAGHEISTRPFQLVTGR
Sbjct:  181 GVMPDGTTRFSIDGKPIYHFMGCSTMAEYTVISEISAAKISDDADLEK----------VCLFGCGVATGFGAVMNTCDVEEGSTVAVFGLGAVGLAALQAAKARKASRIFAIDTNPSKFELAKQLGATDCLNPKDSETPIQQAAHRGWGESCIIGVAAAGHEISTRPFQLVTGR 344
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BLAST of mRNA_H-paniculata_contig18579.4587.1 vs. uniprot
Match: A0A6G0WX48_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WX48_9STRA)

HSP 1 Score: 236 bits (601), Expect = 7.750e-74
Identity = 128/202 (63.37%), Postives = 143/202 (70.79%), Query Frame = 1 
Query:    1 GVMPDGTSRFSIDGKPIYHFMGCSTMSEYTVISEISAAKVSDDANLEKARIESASEKGVCLFGCGVSTGFGAVMNTCNVQSGATVAVFGLGAVGLAAVQAAKARGASRIFAIDLNEEKFGLAKGLGATDCLNPSASDVPIQQ----------------------------AAHRGWGESCVIGVAAAGHEISTRPFQLVTGR 522
            GVMPDGTSRFSI+GKPIYHFMGCST SEY+VI+EISAAK+   A L+           +CLFGCGVSTGFGAV NT  V+ G++VAVFGLGAVGLA +QAAK  GASRIFAID N  K+ +AK LGATDC++P+AS  PIQQ                            AAHRGWGESCVIGVAAAGHEI TRPFQLVTGR
Sbjct:  144 GVMPDGTSRFSINGKPIYHFMGCSTFSEYSVIAEISAAKIDPSAPLDT----------MCLFGCGVSTGFGAVFNTTKVEPGSSVAVFGLGAVGLAVIQAAKVAGASRIFAIDPNTSKYAIAKQLGATDCIDPTASSEPIQQVLVQKTKWGIDYTYDCTGNTEVMRAALEAAHRGWGESCVIGVAAAGHEIKTRPFQLVTGR 335
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BLAST of mRNA_H-paniculata_contig18579.4587.1 vs. uniprot
Match: W4GZC1_9STRA (S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase, variant 2 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GZC1_9STRA)

HSP 1 Score: 231 bits (589), Expect = 1.640e-73
Identity = 123/202 (60.89%), Postives = 143/202 (70.79%), Query Frame = 1 
Query:    1 GVMPDGTSRFSIDGKPIYHFMGCSTMSEYTVISEISAAKVSDDANLEKARIESASEKGVCLFGCGVSTGFGAVMNTCNVQSGATVAVFGLGAVGLAAVQAAKARGASRIFAIDLNEEKFGLAKGLGATDCLNPSASDVPIQQ----------------------------AAHRGWGESCVIGVAAAGHEISTRPFQLVTGR 522
            GVMPDGTSRFSI+G+P+YHFMGCST SEY+VI+EISAAK+   A L+           +CLFGCG+STGFGAV NT  V+ G++VAVFG+GAVGLA +QAAK  GASRIFAID N  KF +A  LGATDC++P+ASD PIQQ                            A+HRGWGESCVIGVAAAGHEI TRPFQL+TGR
Sbjct:    6 GVMPDGTSRFSINGQPLYHFMGCSTFSEYSVIAEISAAKIDPSAPLDT----------MCLFGCGISTGFGAVFNTTKVEPGSSVAVFGIGAVGLAVIQAAKQAGASRIFAIDPNPTKFRMATQLGATDCIDPTASDTPIQQILVETTKWGVDYTYDCTGNTEVMRAALEASHRGWGESCVIGVAAAGHEIQTRPFQLITGR 197
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BLAST of mRNA_H-paniculata_contig18579.4587.1 vs. uniprot
Match: A0A485LHU3_9STRA (Aste57867_21004 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LHU3_9STRA)

HSP 1 Score: 235 bits (599), Expect = 3.070e-73
Identity = 124/202 (61.39%), Postives = 145/202 (71.78%), Query Frame = 1 
Query:    1 GVMPDGTSRFSIDGKPIYHFMGCSTMSEYTVISEISAAKVSDDANLEKARIESASEKGVCLFGCGVSTGFGAVMNTCNVQSGATVAVFGLGAVGLAAVQAAKARGASRIFAIDLNEEKFGLAKGLGATDCLNPSASDVPIQQ----------------------------AAHRGWGESCVIGVAAAGHEISTRPFQLVTGR 522
            GVMPDGTSRFSI+G+P+YHFMGCST SEY+VI+EISAAK+   A L+K          +CLFGCG+STGFGAV NT  V+ G+TVAVFG+GAVGLA +QAAK  GASRIFAID N  KFG+AK LGATDC++P+AS  PIQQ                            A+HRGWG+SCVIGVAA+GHEI TRPFQL+TGR
Sbjct:  153 GVMPDGTSRFSINGQPLYHFMGCSTFSEYSVIAEISAAKIDPTAPLDK----------MCLFGCGISTGFGAVFNTTKVEPGSTVAVFGVGAVGLAVIQAAKLAGASRIFAIDPNASKFGMAKQLGATDCIDPTASKTPIQQVLIEETKWGIDYTYDCTGNTEVMRAALEASHRGWGQSCVIGVAASGHEIQTRPFQLITGR 344
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BLAST of mRNA_H-paniculata_contig18579.4587.1 vs. uniprot
Match: A0A024U2X4_9STRA (S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U2X4_9STRA)

HSP 1 Score: 233 bits (595), Expect = 6.560e-73
Identity = 123/202 (60.89%), Postives = 146/202 (72.28%), Query Frame = 1 
Query:    1 GVMPDGTSRFSIDGKPIYHFMGCSTMSEYTVISEISAAKVSDDANLEKARIESASEKGVCLFGCGVSTGFGAVMNTCNVQSGATVAVFGLGAVGLAAVQAAKARGASRIFAIDLNEEKFGLAKGLGATDCLNPSASDVPIQQ----------------------------AAHRGWGESCVIGVAAAGHEISTRPFQLVTGR 522
            GVMPDGTSRFSI+G+P+YHFMGCST SEY+VI+EISAAK+   A L+K          +CLFGCG+STGFGAV NT  V+ G++VAVFG+GAVGLA +QAAK  GA+RIFAID N  KF +A+ LGATDC++P+AS+VPIQQ                            A+HRGWGESCVIGVAAAGHEI TRPFQL+TGR
Sbjct:  146 GVMPDGTSRFSINGQPLYHFMGCSTFSEYSVIAEISAAKIDPTAPLDK----------MCLFGCGISTGFGAVFNTTKVEPGSSVAVFGIGAVGLAVIQAAKKAGANRIFAIDPNTSKFAMAQELGATDCIDPTASNVPIQQVLVEKTKWGVDYTYDCTGNTEVMRAALEASHRGWGESCVIGVAAAGHEIQTRPFQLITGR 337
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BLAST of mRNA_H-paniculata_contig18579.4587.1 vs. uniprot
Match: F2UEK0_SALR5 (Formaldehyde dehydrogenase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UEK0_SALR5)

HSP 1 Score: 230 bits (587), Expect = 2.950e-72
Identity = 121/202 (59.90%), Postives = 144/202 (71.29%), Query Frame = 1 
Query:    1 GVMPDGTSRFSIDGKPIYHFMGCSTMSEYTVISEISAAKVSDDANLEKARIESASEKGVCLFGCGVSTGFGAVMNTCNVQSGATVAVFGLGAVGLAAVQAAKARGASRIFAIDLNEEKFGLAKGLGATDCLNPSASDVPIQQ----------------------------AAHRGWGESCVIGVAAAGHEISTRPFQLVTGR 522
            GVMPDGT+RFSI+G+PIYHFMGCST SEYTV+++IS AK+ DDA L+           +CLFGCGV+TG GAV NTC V+ G++VAV+GLGAVGLA +QAAK  GASRIFA+D N  KF +A+ LGATDC+NP+  D PIQQ                            ++HRGWG+SCVIGVAAAGHEISTRPFQLVTGR
Sbjct:  141 GVMPDGTTRFSINGEPIYHFMGCSTFSEYTVVADISCAKIPDDAPLDV----------MCLFGCGVTTGLGAVFNTCKVEPGSSVAVWGLGAVGLAVIQAAKKAGASRIFALDTNTSKFSMAEKLGATDCVNPNDFDQPIQQVLVEKTGWGIDYTFDATGNTDVMRAALESSHRGWGKSCVIGVAAAGHEISTRPFQLVTGR 332
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BLAST of mRNA_H-paniculata_contig18579.4587.1 vs. uniprot
Match: W4H086_9STRA (S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H086_9STRA)

HSP 1 Score: 231 bits (589), Expect = 9.790e-72
Identity = 123/202 (60.89%), Postives = 143/202 (70.79%), Query Frame = 1 
Query:    1 GVMPDGTSRFSIDGKPIYHFMGCSTMSEYTVISEISAAKVSDDANLEKARIESASEKGVCLFGCGVSTGFGAVMNTCNVQSGATVAVFGLGAVGLAAVQAAKARGASRIFAIDLNEEKFGLAKGLGATDCLNPSASDVPIQQ----------------------------AAHRGWGESCVIGVAAAGHEISTRPFQLVTGR 522
            GVMPDGTSRFSI+G+P+YHFMGCST SEY+VI+EISAAK+   A L+           +CLFGCG+STGFGAV NT  V+ G++VAVFG+GAVGLA +QAAK  GASRIFAID N  KF +A  LGATDC++P+ASD PIQQ                            A+HRGWGESCVIGVAAAGHEI TRPFQL+TGR
Sbjct:  147 GVMPDGTSRFSINGQPLYHFMGCSTFSEYSVIAEISAAKIDPSAPLDT----------MCLFGCGISTGFGAVFNTTKVEPGSSVAVFGIGAVGLAVIQAAKQAGASRIFAIDPNPTKFRMATQLGATDCIDPTASDTPIQQILVETTKWGVDYTYDCTGNTEVMRAALEASHRGWGESCVIGVAAAGHEIQTRPFQLITGR 338
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BLAST of mRNA_H-paniculata_contig18579.4587.1 vs. uniprot
Match: A0A067BUB6_SAPPC (S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BUB6_SAPPC)

HSP 1 Score: 228 bits (580), Expect = 1.150e-70
Identity = 122/202 (60.40%), Postives = 142/202 (70.30%), Query Frame = 1 
Query:    1 GVMPDGTSRFSIDGKPIYHFMGCSTMSEYTVISEISAAKVSDDANLEKARIESASEKGVCLFGCGVSTGFGAVMNTCNVQSGATVAVFGLGAVGLAAVQAAKARGASRIFAIDLNEEKFGLAKGLGATDCLNPSASDVPIQ----------------------------QAAHRGWGESCVIGVAAAGHEISTRPFQLVTGR 522
            GVMPDGTSRFSI+G+PIYHFMGCST SEY+VI+EISAAK+   A L+K          +CLFGCGVSTGFGAV NT  V  G++VAVFGLGAVGLA +QAAK  GA+RIFAID N  KF +A  LGATDCL+P+A D PIQ                            +A+HRGWG+SCVIGVA+AGHE+ TRPFQL+TGR
Sbjct:  145 GVMPDGTSRFSINGEPIYHFMGCSTFSEYSVIAEISAAKIDPTAPLDK----------MCLFGCGVSTGFGAVFNTTKVHPGSSVAVFGLGAVGLAVIQAAKIAGATRIFAIDPNPSKFEMATSLGATDCLDPTALDEPIQNVLVQKTKWGIDYTYDCTGNVEVMRAALEASHRGWGQSCVIGVASAGHELQTRPFQLITGR 336
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BLAST of mRNA_H-paniculata_contig18579.4587.1 vs. uniprot
Match: A0A7S2UVR6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVR6_9STRA)

HSP 1 Score: 225 bits (573), Expect = 5.380e-70
Identity = 122/204 (59.80%), Postives = 139/204 (68.14%), Query Frame = 1 
Query:    1 GVMPDGTSRFS-IDGKPIYHFMGCSTMSEYTVISEISAAKVSDDANLEKARIESASEKGVCLFGCGVSTGFGAVMNTCNVQSGATVAVFGLGAVGLAAVQAAKARGASRIFAIDLNEEKFGLAKGLGATDCLNPSASDVPIQQ-----------------------------AAHRGWGESCVIGVAAAGHEISTRPFQLVTGR 522
            GVMPDGTSRF   +GK IYHFMGCSTMSEYTV+++IS AK+S +  LEKA          CLFGCGVSTG GAV NTC V+ G++VAVFGLGAVGLA +Q AK  GA+RI A+D+N  KF +AK LGATDC++P   D P+QQ                              AHRGWGESCVIGVAAAGHEISTRPFQLVTGR
Sbjct:   95 GVMPDGTSRFKDAEGKSIYHFMGCSTMSEYTVLADISVAKISKEIELEKA----------CLFGCGVSTGLGAVWNTCKVEQGSSVAVFGLGAVGLAVIQGAKIAGATRIIAVDVNPSKFDMAKELGATDCVDPKDIDKPVQQHIAGDLTDWGVDYSFDCTGNTEVMRAALECAHRGWGESCVIGVAAAGHEISTRPFQLVTGR 288
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BLAST of mRNA_H-paniculata_contig18579.4587.1 vs. uniprot
Match: A9UXC5_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UXC5_MONBE)

HSP 1 Score: 224 bits (570), Expect = 5.650e-69
Identity = 119/202 (58.91%), Postives = 140/202 (69.31%), Query Frame = 1 
Query:    1 GVMPDGTSRFSIDGKPIYHFMGCSTMSEYTVISEISAAKVSDDANLEKARIESASEKGVCLFGCGVSTGFGAVMNTCNVQSGATVAVFGLGAVGLAAVQAAKARGASRIFAIDLNEEKFGLAKGLGATDCLNPSASDVPIQQ----------------------------AAHRGWGESCVIGVAAAGHEISTRPFQLVTGR 522
            GVMPDGTSRFSI+G+PIYHFMG ST SEYTV++EIS AK+   A L+           +CLFGCG+STG GAV NTC V++G+TVAV+G+GAVGLA VQAAK  GA RIFAID N +KF  A+ +GATDC+NP   + PIQQ                            ++HRGWG+SCVIGVAAAGHEISTRPFQLVTGR
Sbjct:  161 GVMPDGTSRFSINGEPIYHFMGTSTFSEYTVVAEISCAKIDQQAPLDV----------MCLFGCGISTGLGAVFNTCKVEAGSTVAVWGVGAVGLAVVQAAKMSGAKRIFAIDTNNDKFDFARRMGATDCINPHDHEDPIQQVLIQETKWGIDYTFDCTGNTDCMRAALESSHRGWGKSCVIGVAAAGHEISTRPFQLVTGR 352
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18579.4587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G297_ECTSI3.330e-9182.18Formaldehyde dehydrogenase n=2 Tax=Ectocarpus TaxI... [more]
A0A6G0WX48_9STRA7.750e-7463.37Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4GZC1_9STRA1.640e-7360.89S-(Hydroxymethyl)glutathione dehydrogenase/class I... [more]
A0A485LHU3_9STRA3.070e-7361.39Aste57867_21004 protein n=1 Tax=Aphanomyces stella... [more]
A0A024U2X4_9STRA6.560e-7360.89S-(Hydroxymethyl)glutathione dehydrogenase/class I... [more]
F2UEK0_SALR52.950e-7259.90Formaldehyde dehydrogenase n=1 Tax=Salpingoeca ros... [more]
W4H086_9STRA9.790e-7260.89S-(Hydroxymethyl)glutathione dehydrogenase/class I... [more]
A0A067BUB6_SAPPC1.150e-7060.40S-(Hydroxymethyl)glutathione dehydrogenase/class I... [more]
A0A7S2UVR6_9STRA5.380e-7059.80Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A9UXC5_MONBE5.650e-6958.91Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18579contigH-paniculata_contig18579:363..5000 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score275.4
Seed ortholog evalue1.8e-71
Seed eggNOG ortholog2880.D7G297
KEGG rclassRC00050,RC00087,RC00088,RC00099,RC00116,RC00167,RC00320,RC00649,RC01715,RC01734,RC02273
KEGG koko:K00121,ko:K01070
KEGG ReactionR00527,R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R06983,R07105,R08281,R08306,R08310
KEGG Pathwayko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204
Hectar predicted targeting categoryother localisation
EggNOG free text desc.alcohol dehydrogenase (NAD) activity
EggNOG OGsCOG1062@1,KOG0022@2759
EC1.1.1.1,1.1.1.284,3.1.2.12
COG Functional cat.C
CAZyCE1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons5
Model size525
Cds size519
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18579.4587.1prot_H-paniculata_contig18579.4587.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig18579 369..5000 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929436.4656174-UTR-H-paniculata_contig18579:362..3681622929436.4656174-UTR-H-paniculata_contig18579:362..368Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18579 363..368 +
1691480860.501476-UTR-H-paniculata_contig18579:362..3681691480860.501476-UTR-H-paniculata_contig18579:362..368Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18579 363..368 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929436.4816735-CDS-H-paniculata_contig18579:368..4241622929436.4816735-CDS-H-paniculata_contig18579:368..424Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18579 369..424 +
1691480860.5113375-CDS-H-paniculata_contig18579:368..4241691480860.5113375-CDS-H-paniculata_contig18579:368..424Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18579 369..424 +
1622929436.4990172-CDS-H-paniculata_contig18579:2667..27791622929436.4990172-CDS-H-paniculata_contig18579:2667..2779Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18579 2668..2779 +
1691480860.5185204-CDS-H-paniculata_contig18579:2667..27791691480860.5185204-CDS-H-paniculata_contig18579:2667..2779Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18579 2668..2779 +
1622929436.5173202-CDS-H-paniculata_contig18579:3547..36701622929436.5173202-CDS-H-paniculata_contig18579:3547..3670Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18579 3548..3670 +
1691480860.5257099-CDS-H-paniculata_contig18579:3547..36701691480860.5257099-CDS-H-paniculata_contig18579:3547..3670Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18579 3548..3670 +
1622929436.5323348-CDS-H-paniculata_contig18579:4405..45341622929436.5323348-CDS-H-paniculata_contig18579:4405..4534Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18579 4406..4534 +
1691480860.532813-CDS-H-paniculata_contig18579:4405..45341691480860.532813-CDS-H-paniculata_contig18579:4405..4534Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18579 4406..4534 +
1622929436.5470552-CDS-H-paniculata_contig18579:4901..50001622929436.5470552-CDS-H-paniculata_contig18579:4901..5000Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18579 4902..5000 +
1691480860.5400474-CDS-H-paniculata_contig18579:4901..50001691480860.5400474-CDS-H-paniculata_contig18579:4901..5000Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18579 4902..5000 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig18579.4587.1

>prot_H-paniculata_contig18579.4587.1 ID=prot_H-paniculata_contig18579.4587.1|Name=mRNA_H-paniculata_contig18579.4587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
MPDGTSRFSIDGKPIYHFMGCSTMSEYTVISEISAAKVSDDANLEKARIE
SASEKGVCLFGCGVSTGFGAVMNTCNVQSGATVAVFGLGAVGLAAVQAAK
ARGASRIFAIDLNEEKFGLAKGLGATDCLNPSASDVPIQQAAHRGWGESC
VIGVAAAGHEISTRPFQLVTGR*
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mRNA from alignment at H-paniculata_contig18579:363..5000+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig18579.4587.1 ID=mRNA_H-paniculata_contig18579.4587.1|Name=mRNA_H-paniculata_contig18579.4587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4638bp|location=Sequence derived from alignment at H-paniculata_contig18579:363..5000+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGGTAATGCCTGATGGTACTTCCCGTTTCTCCATCGACGGCAAGCCCAT
CTACCACTTCATGTGAGCAATCGCCGCTATGTCGTGTTGTGTTGTGTTGT
GTTGTATTGGTGAGGTGTGAACGTAGGTTGTGAACTCTTGCCTCCCCTGC
GTGTGCTTGTCTTCGGTTTGTGTTTTGGTGCCTGTGGTACAGGATGTGGG
TATTCCCTTCCCAGCGTGTCTGACAGATTTGATGTGTGCATCCGTATACC
GATTATGTGCTTCAACATCATCGCAGAACCTTGGTTGTCAGCTCTCTAAT
TCAATGCCGCACATGCCAGCGAGTCAGAGGACGCAAGTCTTCGTCGGCAA
AATTGCCCACATGTAAGAAGAAACGACCGGTCGGCGGGTACGCATCTCCA
TAGCAAGAGAAAAGCACCCGTCGTTTCTCCGGCACAGGGTACGTACACCC
GCGTAGATGCGAAGGGCAATTAACTGCTTCGTCGGTGGCTTTGCTTCACC
AATATAAGAAGAGAAATCAATTTAGAAGAAAAGGATGCTTGAGTATACCG
CCGAGATGCATGCCTGGATACTGTATTTGTTTATACTCGATCAATTGGTG
AGTGAAACCAGAGAAATCGAGTTGGCCTTTTTTTTGCGAGCATCGGGGGG
TATATAGCTATTTAGGACCTTTTTGTAGTGGAGGCGAGATGGTGTTTCAT
GATGATGGAAAGATGGATGGCATTATGAATGGTTTATTTCGTTGTTTCTC
TCTCCAAGCAAGTACATAATCCCCCACGATATATCATCTCTGTGCTATGA
GTACGGGTCGTTCTGTTCGCCGGATCCTCTCTCACCATCTACGGAAACTT
GTTGAGTGTAGTCGGTATAGACGAAAACCTAGCATGTGATAGATTCATGT
GAACCGTTTCGAAGTTTGTTTCGATTTGTCTGCTTGTATTGTTTTTTTTT
TAATTATTATTTCCCGATTTTCACGCCTTTTCGCCGGGAAAATATTTAAA
AAAAAGGCAAAATAGGTCCATATTCCGTTTTTTTTTTCTTCGCACCACGT
TTTTGTTAGTGTTCACCCATGGTTTTTCTAAGCAAGATGCGAGTACCTTC
TAATGCCTAGGGTGAGTCTGAGAAGGCTTGGTATTGCCGTGTGTGTCCGC
AACACTTGCGGCATAGCTTTGTGCATGCTGAATTTCCGAAACAATGGTGA
TGAAGTGTGTACTGTGTGTACTGTGCCGTGTTGTCTAGGGTTGTGTATCG
GTCGAACCCATGAAAAATCATTGATCGGTTAGCGAAGTCAATATACTCAA
TACACTTCATGATATATCGACGAAGGTGATATATCAATGATGTATTGGTG
CGGGCGAATCGATCAGACGAGCTGCTTGCCGCAAGCCCAGTGCCTCCCCC
CCACCCCCCACCCCCCCGACTGGCGGAAAAAATACATTTCTTAGGTTCAT
CTCTTCAAAAGTGACCAACGTACAACACGAGAGCGTTGCCTTCGAAAATT
TATTTTGCATGAATGAGTCGTTTTGTTTTTCCAGAAATAACGGATCTAAA
ACCATGGCTTTAAAATACAACATATTCATAATATAAAATATAGAATATGA
GCATATTTGATTGTATGCTGGGTTACCGCAGTATCAAAATTGATGCCAGT
TCTGTGTGAGGTTTAATGAAATGAAAGGACCTCCCGCGACTTGAGAATTT
TTTGGATTATGACCCCAGCATGCGTACATTCAGTGGATTATGATCATAAC
ATTCGAGTGGAAAATATTGATACATCGGGTTGCGCCCTAACAAGGACAAT
ATGAAATAGCTATATACCCATTCAAATGCATCGTCATCGATACATAAGGC
TTCAGTTTTTCATTTTGCCAACCATGTATTTTTTTTTGTTGAAAAACGAT
TCTCCGGAGTATATATATATACACACAGCGTAGACACATGGTTGGCGTGG
TTTTGCCCACAGCGACTGCAAGCTCGGCATTTATTGTCGAATGATAATTT
GGTGACGAAACTACATCGGGGAGGGGGAGGGGGGGGGGGGAGTTAAACGG
GTTTACGACAGCCTGCAGCCACAACCTATATCTTGTTGGACCTTGTGAGG
TTTTTGCGTACAGACACGCTGTGGGCATGGGGAGTGAGTGCTCCAATACA
GATTCTGGCCCATGGTATCAAATCTATCCGGACACTATACTTTCCACCGG
CAAGGATGTATGTAGAGCAACACTCTTGTGTCTGCATTCGAAATTCGTGG
TATATGCTAGTGTTAACGTTTGTTGGCTCGTTTGTTTTTTCGTTGTCGTG
CGCAGGGGCTGCTCCACGATGTCTGAGTATACTGTGATCTCCGAAATTTC
TGCTGCTAAAGTCTCCGACGATGCGAACCTTGAGAAGGCAAGAATAGAGA
GCGCGTCGGAAAAAGGCGTAATCCATCCCTTCGGGGCGGGGTGAGGTGGG
ATTTTGTGTAGTGATGTAAGTAAAGAAACAAAGGTGAAGTTAGCTAGTGA
GTCAAAGGTCTACAGGAGATGGTACACTGCCGAGAAAACATGACGAAACC
GTAAAATAGGATGGAGGTATGCCGGAAATGCAGAAGCTATTGGATTTCTT
ACCTATGAGCTGACCACGACAAGGTTGAGGTGGTTGGCGGCGCTCGCCCC
CGGCGCTAGCGGGCCGGAGGGGGGGCGATGGAGAGCTCTGGGGATCAGGA
ATGGAATTCCGTTGGCCCACCTGTGGAGTTACATAAGAAGAAGTGATACG
CACGGCATGGTTTGGACTGACTGAATCCTGTGTTCGTTACTGCGATTGCC
GAACAGATCAGCTCTTTCCATTGCTGATGAAATCTGTTGCTCCATTTTGG
ATGAAGAGATTTTGTCAGATAGGAAAATCCACCGTTTCGGTAACCCCGTC
CACTATTTTGGAGGTTGATCATGCATCTGTAAAATAATATGGTGATATTT
GGTATATGCAATATATATATATATATATATATGTCTTTTTTTCCCTGCTC
TTTTACTGCTCTTGCTATTTATTTTTTTGTCCACAATTTGATAATTGTCA
TGTTCCTGTGGCATGCAGAAATGTGCGCAGTTTAGTAGGCATCTAAGTTC
CCTCTACATGCCCAATGTTTCTCAATCTGTGGGTGTGTACATGTGTGCTT
ATGTTTTTTTTTTTTTTTCACTGACCACTTTGCAGGTTTGTCTCTTCGGC
TGCGGAGTTTCGACCGGGTTCGGCGCGGTGATGAACACCTGTAACGTACA
GTCAGGGGCGACTGTTGCTGTCTTTGGTCTTGGCGCTGTCGGATTAGCTG
CTGTTCAGGTATTTGCCCGTCCCGAGTGCAATATGTTTACATTAGGATCA
TTCTAATGCAGGGTCGATTAACCATCAGGCCTCGACAGACACCTGGGGAC
CCTTTTTTTTCGTGCAGAAGCGATCGCGCTTGTTAGATCAGGGGAAAATA
CCGCCTCCGCCCCCCCTTCATAATTGAATTCGATTAAAAGTGGACTATTT
ATTAGGCCACGACCCCCCTCCCCCCCGCGTACTGTCACCTGTCGAAGGGT
TGATTTGTGATTTGTGGTTGCTCTTTTTCTCTTTTTTTTTTTTTAGACTG
GAGTCTACCCAACTACAATTGTATGTGGTCTACATCAATTGTCAGTAAGT
CCATGTACATTTTTTCTTTTTTTTCTTTTATTCAGTCAATCCCACGGCGA
ACAGAGAGTTCTGGAGCTGCCGTACTCGTCACTGTTAGTTCCTCACCACC
TGTTATTTTTTCATCTTGTGTCTATACTGACTGACGACGGGGCTCTCCTT
CCAGTCCGCCGGTTGCAACCTCGAGGATTTGAGTAGGTGCTGGTCTGAAG
TACTTGACCTGGTAGCCATCCCGATCATTGCACGACTCCATTCTCAACAT
TCCTGCACAGTACAGTTAGTTGTTGACACGTATATAAATCAATGCACATA
TTTACTTAGCGCTTCCCTCCCCCCTTCCCGTTGGGACGCCGTTTTTGCCT
GCTCGTCCCCCCCGCCCCCATATTTTGGGTCCTCGTCGTTCAGGCTGCCA
AGGCCAGAGGAGCTTCTCGAATCTTCGCGATTGATCTCAATGAAGAAAAG
TTTGGCTTGGCCAAGGGGCTGGGCGCGACTGATTGCCTCAATCCAAGTGC
GAGCGACGTGCCGATTCAGCAGGTCAGTCAATTAGTTAGGTGTTGACTTC
TAGGTCGTTACGAGCAGCCTTGTGTGTAGAAACAAAGGAGAGGAAAAGTG
AAGATCATAGTCTCCATCTCTCCTTCATGTCCCTTTTAACTGTGGCGCAT
TCCTTTCTCCTCCAGAAGTTTGTTTTTTTCTTTTTGAACGTCCCCTTCTG
GCAAGTTCCGAGATTCACTGAAATCCGAGCAGATATCGGTCTAAAGTTAT
CGCCCACAACGTTGGCGTTAACACTGCCATACCATGTTTTGGCGACTTCT
CGTAGATCCTTGTGAAGGAGACGAAGTGGGGCGTGGATTACACGTTCGAC
GCGACGGGCAACGTAAAGGTCATGCGGGCGGCACTGGAGGCGGCGCACCG
CGGATGGGGAGAGTCGTGCGTTATCGGGGTGGCGGCTGCGGGTCACGAGA
TCTCCACGCGGCCTTTCCAGCTCGTTACCGGCAGGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig18579:363..5000+

>mRNA_H-paniculata_contig18579.4587.1 ID=mRNA_H-paniculata_contig18579.4587.1|Name=mRNA_H-paniculata_contig18579.4587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1038bp|location=Sequence derived from alignment at H-paniculata_contig18579:363..5000+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCTGATGGTACTTCCCGTTTCTCCATCGACGGCAAGCCCATCTACCA
CTTCATATGCCTGATGGTACTTCCCGTTTCTCCATCGACGGCAAGCCCAT
CTACCACTTCATGGGCTGCTCCACGATGTCTGAGTATACTGTGATCTCCG
AAATTTCTGCTGCTAAAGTCTCCGACGATGCGAACCTTGAGAAGGCAAGA
ATAGAGAGCGCGTCGGAAAAAGGCGGGCTGCTCCACGATGTCTGAGTATA
CTGTGATCTCCGAAATTTCTGCTGCTAAAGTCTCCGACGATGCGAACCTT
GAGAAGGCAAGAATAGAGAGCGCGTCGGAAAAAGGCGTTTGTCTCTTCGG
CTGCGGAGTTTCGACCGGGTTCGGCGCGGTGATGAACACCTGTAACGTAC
AGTCAGGGGCGACTGTTGCTGTCTTTGGTCTTGGCGCTGTCGGATTAGCT
GCTGTTCAGGTTTGTCTCTTCGGCTGCGGAGTTTCGACCGGGTTCGGCGC
GGTGATGAACACCTGTAACGTACAGTCAGGGGCGACTGTTGCTGTCTTTG
GTCTTGGCGCTGTCGGATTAGCTGCTGTTCAGGCTGCCAAGGCCAGAGGA
GCTTCTCGAATCTTCGCGATTGATCTCAATGAAGAAAAGTTTGGCTTGGC
CAAGGGGCTGGGCGCGACTGATTGCCTCAATCCAAGTGCGAGCGACGTGC
CGATTCAGCAGGCTGCCAAGGCCAGAGGAGCTTCTCGAATCTTCGCGATT
GATCTCAATGAAGAAAAGTTTGGCTTGGCCAAGGGGCTGGGCGCGACTGA
TTGCCTCAATCCAAGTGCGAGCGACGTGCCGATTCAGCAGGCGGCGCACC
GCGGATGGGGAGAGTCGTGCGTTATCGGGGTGGCGGCTGCGGGTCACGAG
ATCTCCACGCGGCCTTTCCAGCTCGTTACCGGCAGGTGAGCGGCGCACCG
CGGATGGGGAGAGTCGTGCGTTATCGGGGTGGCGGCTGCGGGTCACGAGA
TCTCCACGCGGCCTTTCCAGCTCGTTACCGGCAGGTGA
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