prot_H-paniculata_contig1857.4583.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1857.4583.1
Unique Nameprot_H-paniculata_contig1857.4583.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length64
Homology
BLAST of mRNA_H-paniculata_contig1857.4583.1 vs. uniprot
Match: D8LFT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFT4_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 5.560e-35
Identity = 53/60 (88.33%), Postives = 57/60 (95.00%), Query Frame = 0
Query:    5 TGICFNCGSGKHALRVCPKPKKTDGSLPHATCFVCKAKGHISAHCKQNANGIYPKGGFCK 64
            TGICFNCGS KHALRVCP PK+ DGSLP+ATCF+CKAKGHISAHCKQNANG+YPKGGFCK
Sbjct:  119 TGICFNCGSAKHALRVCPAPKQKDGSLPYATCFICKAKGHISAHCKQNANGVYPKGGFCK 178          
BLAST of mRNA_H-paniculata_contig1857.4583.1 vs. uniprot
Match: A0A0G4HJ28_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HJ28_9ALVE)

HSP 1 Score: 96.7 bits (239), Expect = 1.800e-22
Identity = 37/60 (61.67%), Postives = 47/60 (78.33%), Query Frame = 0
Query:    5 TGICFNCGSGKHALRVCPKPKKTDGSLPHATCFVCKAKGHISAHCKQNANGIYPKGGFCK 64
            TGIC+NCGS  H+L+ CP+P+K DGSLP A CFVCK  GHI + C QN +G+YP+GG C+
Sbjct:  152 TGICYNCGSKAHSLKACPEPRKPDGSLPFALCFVCKQMGHIVSKCPQNTSGVYPEGGECR 211          
BLAST of mRNA_H-paniculata_contig1857.4583.1 vs. uniprot
Match: A0A0C2XNF4_9AGAM (Uncharacterized protein n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C2XNF4_9AGAM)

HSP 1 Score: 80.9 bits (198), Expect = 5.520e-17
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    2 QSNTGICFNCGSGKHALRVCPKPKKTDGSLPHATCFVCKAKGHISAHCKQNANGIYPKGG 61
            ++  GIC+ CGS  H L  C KP+   GSLP A+CFVCK  GH+++ C QN  G+YP GG
Sbjct:  113 KAGIGICYRCGSSNHTLSKCRKPRDEAGSLPFASCFVCKGTGHLASTCPQNEKGVYPNGG 172          
BLAST of mRNA_H-paniculata_contig1857.4583.1 vs. uniprot
Match: A0A1Y2CGT7_9FUNG (Uncharacterized protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CGT7_9FUNG)

HSP 1 Score: 75.5 bits (184), Expect = 1.190e-14
Identity = 29/59 (49.15%), Postives = 38/59 (64.41%), Query Frame = 0
Query:    6 GICFNCGSGKHALRVCPKPKKTDGSLPHATCFVCKAKGHISAHCKQNANGIYPKGGFCK 64
            GIC+ CGS +H    C K   +D   P A+CFVCKA GH+++ C +N  G+YP GG CK
Sbjct:  186 GICYRCGSTEHKSSQCKKKLNSDNPFPFASCFVCKATGHLASACPKNDKGMYPNGGSCK 244          
BLAST of mRNA_H-paniculata_contig1857.4583.1 vs. uniprot
Match: A0D3A0_PARTE (Uncharacterized protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0D3A0_PARTE)

HSP 1 Score: 74.3 bits (181), Expect = 1.400e-14
Identity = 33/55 (60.00%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    7 ICFNCGSGKHALRVCPKPKKTDGSLPHATCFVCKAKGHISAHCKQNANGIYPKGG 61
            IC+NCGS KH L+ C KPK   GSL  ATCFVCK  GHIS  C +N  G+Y  GG
Sbjct:  153 ICYNCGSQKHTLKDCQKPKS--GSLKFATCFVCKEAGHISRDCPKNPKGLYAYGG 205          
BLAST of mRNA_H-paniculata_contig1857.4583.1 vs. uniprot
Match: A0A2A9MHL6_9APIC (Zinc knuckle domain-containing protein n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9MHL6_9APIC)

HSP 1 Score: 67.4 bits (163), Expect = 1.410e-11
Identity = 28/60 (46.67%), Postives = 36/60 (60.00%), Query Frame = 0
Query:    5 TGICFNCGSGKHALRVCPKPKKTDGSLPHATCFVCKAKGHISAHCKQNANGIYPKGGFCK 64
            +G+CFNCG+  H L+ C K +K DGSLP A          +SA C Q+  G YPKGG C+
Sbjct:  314 SGVCFNCGATDHTLKNCKKKRKPDGSLPFALXXXXXXXXXLSAGCPQSTTGKYPKGGCCR 373          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1857.4583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LFT4_ECTSI5.560e-3588.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0G4HJ28_9ALVE1.800e-2261.67Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A0C2XNF4_9AGAM5.520e-1751.67Uncharacterized protein n=1 Tax=Serendipita vermif... [more]
A0A1Y2CGT7_9FUNG1.190e-1449.15Uncharacterized protein n=1 Tax=Rhizoclosmatium gl... [more]
A0D3A0_PARTE1.400e-1460.00Uncharacterized protein n=1 Tax=Paramecium tetraur... [more]
A0A2A9MHL6_9APIC1.410e-1146.67Zinc knuckle domain-containing protein n=1 Tax=Bes... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 35..51
e-value: 0.021
score: 21.5
coord: 7..23
e-value: 0.1
score: 17.4
NoneNo IPR availableGENE3D4.10.60.10coord: 3..61
e-value: 3.0E-12
score: 48.2
IPR042246Zinc finger CCHC domain-containing protein 9PANTHERPTHR46242FAMILY NOT NAMEDcoord: 2..64
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 4..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1857contigH-paniculata_contig1857:22459..22650 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1857.4583.1mRNA_H-paniculata_contig1857.4583.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1857 22459..22650 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1857.4583.1 ID=prot_H-paniculata_contig1857.4583.1|Name=mRNA_H-paniculata_contig1857.4583.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=64bp
MQSNTGICFNCGSGKHALRVCPKPKKTDGSLPHATCFVCKAKGHISAHCK
QNANGIYPKGGFCK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR042246ZCCHC9
IPR036875Znf_CCHC_sf