mRNA_H-paniculata_contig1857.4582.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1857.4582.1
Unique NamemRNA_H-paniculata_contig1857.4582.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1857.4582.1 vs. uniprot
Match: D8LFT3_ECTSI (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT3_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 7.390e-66
Identity = 120/170 (70.59%), Postives = 142/170 (83.53%), Query Frame = 1 
Query:    1 SGTKLDTNGRGAMKKALLVLKGKELKLASAGDALAQHQRLHLEVEALRAEVRAGEKQVQECANRLTRAEATLSGPLKAAKQLLEAGRKAEGGEIYVADVVDYAQRISGMTSAPSYWKPGMAMVGFAPPAPRPEMMRAGALSAFAVTTGTS-LSAEKLLKIAEGLDKPPDK 507
            SGTKLD N R A++KAL++L GKE KL  A +AL +HQ+LH EVE+LR EVR GE+QVQ+CA +LT A+A L GPL+ AK+LLEAGRKAE  EI V D+VDYAQRISG+TSAP+YWKPGMAMVGFAPPAPRPEMMRAGALSAFAV+ GTS LS  +LL +A  LD+PPD+
Sbjct:   30 SGTKLDANARAAIRKALVLLNGKEAKLTKASEALREHQQLHAEVESLRQEVRYGEQQVQDCARKLTEADAALRGPLRDAKRLLEAGRKAEAAEIDVRDIVDYAQRISGITSAPAYWKPGMAMVGFAPPAPRPEMMRAGALSAFAVSPGTSSLSLPELLTLARDLDRPPDQ 199
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BLAST of mRNA_H-paniculata_contig1857.4582.1 vs. uniprot
Match: A0A835YUZ4_9STRA (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUZ4_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 3.130e-14
Identity = 45/81 (55.56%), Postives = 55/81 (67.90%), Query Frame = 1 
Query:  181 CANRLTRAEATLSGPLKAAKQLLEAGRKAEGGEIYVADVVDYAQRISGMTSAPSYWKPGMAMVGFAPPAPRPEMMRAGALS 423
            C   +  A A L   L++A++ L    KA    + V+D+V YAQRISG TSAP+YWKPGM MVGF PPAP PEMMR GAL+
Sbjct:   59 CVAAIAGASADLRHALESARKSLGEFDKACAAGVAVSDIVAYAQRISGTTSAPAYWKPGMPMVGFLPPAPLPEMMRMGALT 139
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BLAST of mRNA_H-paniculata_contig1857.4582.1 vs. uniprot
Match: A0A7S3UVI8_HETAK (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVI8_HETAK)

HSP 1 Score: 75.1 bits (183), Expect = 9.140e-12
Identity = 40/86 (46.51%), Postives = 55/86 (63.95%), Query Frame = 1 
Query:  175 QECANRLTRAEATLSGPLKAAKQLLEAGRKAEGGEIYVADVVDYAQRISGMTSAPSYWKPGMAMVGFAPPAPRPEMMRAGALSAFA 432
            ++ A+ L+  E  L   L+  K +++A R A    + +  +V YAQRI G T+AP YWKPGM MVGF PPAP PE +RAG+  A+A
Sbjct:   78 RDLASALSSKEKDLRIALRKVKPVVDAARLANANPVSLKGLVAYAQRIGGTTAAPPYWKPGMPMVGFIPPAPLPEQIRAGSFHAYA 163
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BLAST of mRNA_H-paniculata_contig1857.4582.1 vs. uniprot
Match: A0A8K1CAS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAS9_PYTOL)

HSP 1 Score: 73.9 bits (180), Expect = 6.340e-11
Identity = 50/132 (37.88%), Postives = 76/132 (57.58%), Query Frame = 1 
Query:   67 KELKLASAGDALAQHQRLHLEVEALRAEVRAGEKQVQECANRLTRAEATLSGPLKAAKQLLEAGRKAEGGEIYVADVVDYAQRISGMTSAPSYWKPGMAMVGFAPPAPRPEMMRAGALSAFAVTTGTSLSAE 462
            K+  L SA   L QHQ    E+ A++ E+   +++V   A +L +++  ++  LK  +++L+  R+ +   +   DVV YA RI+G TSAP  W+PG  M GF PPAP+ +MMRAG LS   V    +L  E
Sbjct:   54 KDRDLLSAVKTLVQHQVAQKELLAVQDEIHEKKQKVVRYAAQLRQSQEDIALVLKKHRRVLDHARQKQKVLLDPRDVVAYAHRIAGTTSAPKEWRPGFPMFGFMPPAPQEQMMRAGVLSRGVVDEVVTLEPE 185
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BLAST of mRNA_H-paniculata_contig1857.4582.1 vs. uniprot
Match: A0A024TZF4_9STRA (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZF4_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 3.410e-10
Identity = 48/127 (37.80%), Postives = 72/127 (56.69%), Query Frame = 1 
Query:   49 LLVLKGKELKLASAGDALAQHQRLHLEVEALRAEVRAGEKQVQECANRLTRAEATLSGPLKAAKQLLEAGRKAEGGEIYV--ADVVDYAQRISGMTSAPSYWKPGMAMVGFAPPAPRPEMMRAGALS 423
            L+V K K+L   +    L QHQ    E++AL+A++   E+++   A  L   + +++  L   ++ LE   +    ++ +   +VV YA +I+G TSAP  WKP   M GF PPAP PEMMRAG LS
Sbjct:   49 LVVAKDKQL--LNTVKQLNQHQSAQKELDALKAQIADKEQKIVRYAKELRSGQQSIASALAKHRRTLEQCHQDSSSKVVLDPLEVVAYAHKIAGSTSAPPNWKPEYPMFGFVPPAPTPEMMRAGVLS 173
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BLAST of mRNA_H-paniculata_contig1857.4582.1 vs. uniprot
Match: D0NRG4_PHYIT (Mediator of RNA polymerase II transcription subunit 4 n=24 Tax=Phytophthora TaxID=4783 RepID=D0NRG4_PHYIT)

HSP 1 Score: 70.1 bits (170), Expect = 1.170e-9
Identity = 51/154 (33.12%), Postives = 80/154 (51.95%), Query Frame = 1 
Query:   67 KELKLASAGDALAQHQRLHLEVEALRAEVRAGEKQVQECANRLTRAEATLSGPLKAAKQLLEAGRKAEGGEIYVADVVDYAQRISGMTSAPSYWKPGMAMVGFAPPAPRPEMMRAGALSAFAVTTGTSLSAEKLLKIAEGLDKPPDKAALDDTN 528
            K+  L +A   LA+HQ    E+  + AE+   +++V + A +L  ++  ++  L+  +  L+  ++     +   D+V YA RI+G TSAP  W+PG  M GF PPAP+  MMRAG LS   V    +   EK    A  + K  D  A++  N
Sbjct:   55 KDRDLLTAVKKLARHQVAQKELLRIEAEIENKKQKVVQYAAQLRCSQEDIADVLRKHRVTLQNAKQKSKVVLDPRDIVAYAHRIAGTTSAPKEWQPGFPMFGFMPPAPQEHMMRAGVLSRGIVAEIVTQGPEKYTSTAARVSKEGDGDAMEKLN 208
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BLAST of mRNA_H-paniculata_contig1857.4582.1 vs. uniprot
Match: A0A0P1AJW5_PLAHL (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJW5_PLAHL)

HSP 1 Score: 69.7 bits (169), Expect = 1.550e-9
Identity = 41/108 (37.96%), Postives = 67/108 (62.04%), Query Frame = 1 
Query:  100 LAQHQRLHLEVEALRAEVRAGEKQVQECANRLTRAEATLSGPLKAAKQLLEAGRKAEGGEIYVADVVDYAQRISGMTSAPSYWKPGMAMVGFAPPAPRPEMMRAGALS 423
            LA+HQ    E+  + AE++  E++V + A +L +++  ++  LK  + +L+  ++    ++   +V+ YA RI+G TSAP  W+PG  M GF PPAP+  MMRAG LS
Sbjct:   67 LARHQVTQKELLRIEAEIKGKEQKVIQYAAQLRQSQENIANVLKKHQVVLQNAKRQVQVKLDPRNVIAYAHRIAGTTSAPKEWQPGFPMFGFMPPAPQEHMMRAGVLS 174
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BLAST of mRNA_H-paniculata_contig1857.4582.1 vs. uniprot
Match: H3H5Y2_PHYRM (PPM-type phosphatase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5Y2_PHYRM)

HSP 1 Score: 70.5 bits (171), Expect = 1.860e-9
Identity = 44/119 (36.97%), Postives = 70/119 (58.82%), Query Frame = 1 
Query:   67 KELKLASAGDALAQHQRLHLEVEALRAEVRAGEKQVQECANRLTRAEATLSGPLKAAKQLLEAGRKAEGGEIYVADVVDYAQRISGMTSAPSYWKPGMAMVGFAPPAPRPEMMRAGALS 423
            K+ +L  A   LA+HQ    E+  + AE+ + + +V + A +L R++  ++  L+  + +L+  +      +   D+V YA RI+G TSAP  W+PG+ M GF PPAP+  MMRAG LS
Sbjct:   58 KDRELLLAVKKLARHQLAQKELLRVEAEIESKKHKVVQYAAQLRRSQEDIANVLRKHRVVLQNAKHQSKVVLDPRDIVAYAHRIAGTTSAPKEWQPGLPMFGFMPPAPQEHMMRAGVLS 176
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BLAST of mRNA_H-paniculata_contig1857.4582.1 vs. uniprot
Match: A0A5D6Y451_9STRA (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y451_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 5.520e-9
Identity = 50/133 (37.59%), Postives = 71/133 (53.38%), Query Frame = 1 
Query:   67 KELKLASAGDALAQHQRLHLEVEALRAEVRAGEKQVQECANRLTRAEATLSGPLKAAKQLLEAGRKAEGGEIYVADVVDYAQRISGMTSAPSYWKPGMAMVGFAPPAPRPEMMRAGALSAFAVTTGTSLSAEK 465
            K+ +L +A   LA+HQ    E+ A++ E+   + +V   A +L R++      L+ AKQ  +         +   D+V YA RI+G TSAP  W+PG  M GF PPAP+P MMRAG LS   V    +   EK
Sbjct:   54 KDRELLAAVKKLARHQVAQKELAAVQEEISKKKLKVVRYAAQLRRSQEKHQTVLQHAKQKTKV-------VLDPRDIVAYAHRIAGTTSAPREWRPGFPMFGFMPPAPQPHMMRAGVLSRGVVAETVTQEPEK 179
[Close]
BLAST of mRNA_H-paniculata_contig1857.4582.1 vs. uniprot
Match: A0A3M6VUY4_9STRA (Mediator of RNA polymerase II transcription subunit 4 n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUY4_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 6.890e-9
Identity = 51/155 (32.90%), Postives = 82/155 (52.90%), Query Frame = 1 
Query:   67 KELKLASAGDALAQHQRLHLEVEALRAEVRAGEKQVQECANRLTRAEATLSGPLKAAKQLLEAGRKAEGGEIYVADVVDYAQRISGMTSAPSYWKPGMAMVGFAPPAPRPEMMRAGALS----AFAVTTGTSLSAEKLLKIAEGLDKPPDKAALD 519
            K+  L +A   L++HQ    E+  ++ E+   +++V E A +L R++  ++  L+  + +L+  ++     +   D++ YA RI+G TSAP  W+PG  M GF PPAP+  MMRAG LS    A  VT G  L      ++ +  D   D   LD
Sbjct:   58 KDRDLLAAVKKLSRHQVAQTELLRIKTEIANKKQKVVEYATQLHRSQENVAQVLRKHRVVLQNTKEKAKVVLDPRDLIAYAHRIAGTTSAPKEWQPGFPMFGFMPPAPQEHMMRAGVLSRGIVAEIVTQGPELYTSIAARVKQEGDGHEDIEKLD 212
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1857.4582.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D8LFT3_ECTSI7.390e-6670.59Mediator of RNA polymerase II transcription subuni... [more]
A0A835YUZ4_9STRA3.130e-1455.56Mediator of RNA polymerase II transcription subuni... [more]
A0A7S3UVI8_HETAK9.140e-1246.51Mediator of RNA polymerase II transcription subuni... [more]
A0A8K1CAS9_PYTOL6.340e-1137.88Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024TZF4_9STRA3.410e-1037.80Mediator of RNA polymerase II transcription subuni... [more]
D0NRG4_PHYIT1.170e-933.12Mediator of RNA polymerase II transcription subuni... [more]
A0A0P1AJW5_PLAHL1.550e-937.96Mediator of RNA polymerase II transcription subuni... [more]
H3H5Y2_PHYRM1.860e-936.97PPM-type phosphatase domain-containing protein n=1... [more]
A0A5D6Y451_9STRA5.520e-937.59Mediator of RNA polymerase II transcription subuni... [more]
A0A3M6VUY4_9STRA6.890e-932.90Mediator of RNA polymerase II transcription subuni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1857contigH-paniculata_contig1857:14583..18211 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score78.2
Seed ortholog evalue6.3e-12
Seed eggNOG ortholog36331.EPrPI00000022901
KEGG koko:K15146
KEGG Pathwayko04919,map04919
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0006355,GO:0006357,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0016591,GO:0016592,GO:0019219,GO:0019222,GO:0030880,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070847,GO:0080090,GO:0090575,GO:1902494,GO:1903506,GO:1990234,GO:2000112,GO:2001141
EggNOG free text desc.Source PGD
EggNOG OGs1MAHE@121069,2CMF1@1,2QQ6I@2759
Ec32 ortholog descriptionMediator complex, subunit Med4
Ec32 orthologEc-01_001020.1
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03021
Exons4
Model size1137
Cds size774
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1857.4582.1prot_H-paniculata_contig1857.4582.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1857 14910..18175 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929436.0781772-UTR-H-paniculata_contig1857:14582..149091622929436.0781772-UTR-H-paniculata_contig1857:14582..14909Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1857 14583..14909 -
1691480860.3958018-UTR-H-paniculata_contig1857:14582..149091691480860.3958018-UTR-H-paniculata_contig1857:14582..14909Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1857 14583..14909 -
1622929436.1854239-UTR-H-paniculata_contig1857:18175..182111622929436.1854239-UTR-H-paniculata_contig1857:18175..18211Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1857 18176..18211 -
1691480860.4419339-UTR-H-paniculata_contig1857:18175..182111691480860.4419339-UTR-H-paniculata_contig1857:18175..18211Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1857 18176..18211 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929436.0968592-CDS-H-paniculata_contig1857:14909..152771622929436.0968592-CDS-H-paniculata_contig1857:14909..15277Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1857 14910..15277 -
1691480860.4105465-CDS-H-paniculata_contig1857:14909..152771691480860.4105465-CDS-H-paniculata_contig1857:14909..15277Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1857 14910..15277 -
1622929436.1167743-CDS-H-paniculata_contig1857:16076..162441622929436.1167743-CDS-H-paniculata_contig1857:16076..16244Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1857 16077..16244 -
1691480860.418857-CDS-H-paniculata_contig1857:16076..162441691480860.418857-CDS-H-paniculata_contig1857:16076..16244Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1857 16077..16244 -
1622929436.1348712-CDS-H-paniculata_contig1857:17066..172401622929436.1348712-CDS-H-paniculata_contig1857:17066..17240Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1857 17067..17240 -
1691480860.426791-CDS-H-paniculata_contig1857:17066..172401691480860.426791-CDS-H-paniculata_contig1857:17066..17240Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1857 17067..17240 -
1622929436.1573586-CDS-H-paniculata_contig1857:18111..181751622929436.1573586-CDS-H-paniculata_contig1857:18111..18175Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1857 18112..18175 -
1691480860.43463-CDS-H-paniculata_contig1857:18111..181751691480860.43463-CDS-H-paniculata_contig1857:18111..18175Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1857 18112..18175 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1857.4582.1

>prot_H-paniculata_contig1857.4582.1 ID=prot_H-paniculata_contig1857.4582.1|Name=mRNA_H-paniculata_contig1857.4582.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=258bp
MKKALLVLKGKELKLASAGDALAQHQRLHLEVEALRAEVRAGEKQVQECA
NRLTRAEATLSGPLKAAKQLLEAGRKAEGGEIYVADVVDYAQRISGMTSA
PSYWKPGMAMVGFAPPAPRPEMMRAGALSAFAVTTGTSLSAEKLLKIAEG
LDKPPDKAALDDTNGRSSDSTSDDNSSSEILPNGTKKAGDGKRDEDGKSR
KTKEAEAKRTAAGKAGASSNSVGGLSGIFSRDSAPEKPKISLDISDDSDS
DEDDDSD*
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mRNA from alignment at H-paniculata_contig1857:14583..18211-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1857.4582.1 ID=mRNA_H-paniculata_contig1857.4582.1|Name=mRNA_H-paniculata_contig1857.4582.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3629bp|location=Sequence derived from alignment at H-paniculata_contig1857:14583..18211- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCGGGACTAAACTGGACACGAATGGTCGAGGTGCCATGAAAAAAGCTCT
GCTGGTATTGAAAGGCAAGGAGCTAAAGCTGGCCAGCGCTGGCGACGCAC
GTGAGTTGCTCTCGTAGGCATATGCCAGTACGTATTATAGTACGAGGTTG
GGCACAAACCTTGCTGGAATGCTGCAACCGGTACCAAGTGTACTGGATGT
GCTGTTTGCTCTTGTTGCATATATTATTACGTGAACCAACACGTGTCACC
GATGGCAGGGCTTGAACCACACCCGCAGAAGTGCAATAGGGGGGTGGGGT
TACCATAAAACAAAATGGAGGTATGCTCATCATCTTCAAGCTGCTGAATT
ACTTGTCCACAAAATGAGCCAGTCAACGAGAGGGGGGGGTGTAATAGGGG
TGTACTATATATTTATCCAGCACTTGGCGGGATATCAGTTGTTGCCCGTC
GTACTCGAAAACAAAAAGTATCCTACGGGGCTGCGCAGTCGACTTACGGA
TAATGTGAAGTAAACATATTCGTCGAGTGGGTTCTGAATATATGCAAGAC
GAACACGTCACCGTGTCAGACAAGATGGTGCTGCAGCATTGATTGCCTGC
CCGACGCTTCTGCGTGGGCTATGCACATGCAGTGGCACTTGCATAGCATA
CAAAGAGGCCTACCAGCTCGCCTACACGACCCACCAGACTGACCAGAACC
TACACACACATAAGTGCGGTAAGGGGCGTCCAGAGGGTAGGGGGGGAAGC
GGAGTCTAGCTCGAGCCCTGCCTTCTGTTACACCCGTTGAATACAGTAAA
CCAGCTACTCTTTTTTTCGCGTTGTACATGAAGTAACTCTACCAACCTTC
CATCGAATCTAACCACCGTTCTCTCGCCCGCTTGTCGAATAACGTTTTCC
ACCGACCCTTTTTTGCCCTCGCTGTACTCAACGCCCCCTTCACCCGTGTT
GCATCGGTCGTTGGGAAGCAGTCGCGCAACATCAACGACTACACTTGGAG
GTAGAGGCCCTTCGAGCAGAAGTCCGCGCCGGGGAGAAGCAAGTGCAGGA
GTGCGCAAATCGACTGACGAGGGCCGAGGCAACGTTATCAGGGCCATTGA
AGGCTGCCAAGCAGTTACTCGAGGCCGGGCGGAAAGCGGAGGGGGGTGAG
TGACTGAGCGCCAACTTTCCGGCAGTCTTGAACTCGGGTGTACGCATTTG
TGTTGATTTTTTCATCGAAGGGAGTTGCACAGCATTTGTCGAGTGAGAGA
CCCAGCGCGGCGCGCTCTCTATACCGTGGTGCTGTACTCGGTTTATCCAG
TGTCTCTTGTTCTTGTCAAAGCGATTATTGAGGCTTTCGTAGCAAGCGTT
GAGCACAACACTTTAGTTGTGTACCGTGGCCTTGTACCCCGACTCCAGTT
GTCATCATTTTCTTCGAGCACTTTGCGCGGCGTGTACCGTAGGGAGCTAC
TTCAGCAAAGGAAACGCGAAAAATATCAAACAGTCCCATGTAGCTCTCAG
ACAGAGAACAGCTACGTACTACGCTACTACTGGGTAGGTCTACGCGTGGG
TCGCCATGCCAAGCGTGGCTTGGGCATAAGCTTTAAGCCGACTTCTTGTC
TCTGGGTCCAAAGAGTATTCCTCTAGGTAAATGTAGTATCGACTATTTTC
GAATACCATGGTTGTTTTTGGTCATTAGTTTTACGATCGACTTGGTACAC
AACGTGACCACGCAACGGCGCCCGAAGGATACACCCATATTTGTTTGTGT
CTGTGTCTGTGTCTGTGTCTGTGTCTGTGTGTCTGTGTGTCTGTGTCTGT
GTGTCTGTGTGTCTGTGTGTCTGTGTCTGTGTATGCGTCGCTGGCTCACC
TTGAATTTCGCATCGCAAGCCTCATAACCGTTTCACGTTACCTTCCGCAG
ACCCCAGCCCTAATCCTTTTCCAAACCGTATGTCTCCTCCTTTTTTTGAC
GCGTACATTATTTTCAGGGGAGATTTATGTTGCAGATGTAGTGGACTACG
CGCAACGGATTAGTGGAATGACATCGGCGCCGTCATACTGGAAGCCTGGG
ATGGCGATGGTCGGTTTCGCGCCACCCGCTCCGCGACCTGAGATGATGCG
AGCGGGTGCCCTTAGTGCTTTCGCGGTCACCACAGGTGTGTCTTGGGATG
GTATTCAGCGTTTTGTGTCAGGATTCTGGGCTACCGTATCATGGTCTGGA
TCAGGGTTTTCATGTGTAGTAGATTCAGGTTGCATTTAAGGGTTACAACA
TTCGGCGTGCTGTGATTTTGAGCCACAACACATTAGGTTCGGCTGAGTAG
TAGGCCTAGTAGCTACTCAGAAAGCAAACTAAGGTGGAATTATTATCAGA
CTAAGAGTAAGTAGCATTCGATATGAGAAAGAGCAAGAGACCCTAAAGTG
CTAATGATGGGAAATAAATATAGTTTCACACCGAAATATTCCAGGCATGG
AGCTACCTAACTGCGTAAGTAGTGATGATTCCTGGCGTGGAAACGTCGAT
ATTTCCCTCCTTGGAGATATTTCTTGTGTATAGTTAGTGGGCTGTGTAGG
TGCGTTGGTGTCTTCGCGGTGCGATTGCTTGTTGAAGAGGTTTCCACCAC
ATGACTGACTCACTCTTGGATTGAATCGTTCGCCGGCGAATTCTGTGACG
GGGAGACATTGTCGTCGTCGCTTGTGCTCTGAGAGTGTCACGTTTGGCTG
ATCCGTGGGCCTGCCCTAGTTGACTCAGTATGCCAACAGAGACGCACGAA
TTTGATTGAAGGAGGTGTTCGTCATGGGTATTTTTTTCTTCTATTCGCTT
CCCACGAACCATCGAAGCTGCTACCTTTGACTCCATTCTCAACACTTCGA
GTATTGCTTTGTTTCATCCCGCCCCCCCCCCCCCCGACACTCAAACATGA
ATACATCCCCCCCTACCCCGACGCACTCCCGCAGGCACTTCGCTCTCCGC
GGAGAAACTCTTGAAAATTGCCGAGGGATTGGACAAACCGCCAGATAAAG
CGGCTTTGGATGACACGAACGGGCGTAGTTCAGATAGCACGAGCGATGAT
AACAGTAGTTCAGAAATATTACCAAATGGGACGAAGAAAGCGGGCGATGG
GAAGAGAGACGAGGATGGGAAGTCCAGGAAGACAAAGGAGGCGGAAGCCA
AACGAACGGCGGCCGGGAAAGCGGGGGCGAGTAGTAATAGCGTGGGGGGT
TTATCGGGTATCTTTTCGCGAGATTCGGCCCCAGAAAAGCCAAAGATCTC
TCTCGATATTAGCGACGATAGCGACAGCGATGAGGATGATGATAGCGATT
AAGAAGTTATTTGTATTTTGTTGAGTTGTTGCAACGATATTAGGATTATT
CTTGCAAGAGGTTTTGCCTCTTAAATTCAATCGAGCAGCACGAACTTCAA
CATGTAAAGCAAGGGCCTACGCTGTCTCTGCGTACAAGGTCATGTGTTCC
TATAGATGTGTTACCCCGGTTACAGGTATGTATATGTTTCGGTTTGCCGT
TCGCCTGCGCGTGTAGTTATCTGGCAAATGTCGCAAACACGGAGGTTTTG
TGTGAGTTCAGTGGCGTTTTTGGCAACAGCTGGAGTGAAAAGTTGTCGAG
TCTCTATATTTCTTTTTCTTTCATCTCCT
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Coding sequence (CDS) from alignment at H-paniculata_contig1857:14583..18211-

>mRNA_H-paniculata_contig1857.4582.1 ID=mRNA_H-paniculata_contig1857.4582.1|Name=mRNA_H-paniculata_contig1857.4582.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1548bp|location=Sequence derived from alignment at H-paniculata_contig1857:14583..18211- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAAAAAGCTCTGCTGGTATTGAAAGGCAAGGAGCTAAAGCTGGCCAG
CGCTGGCGACGCACATGAAAAAAGCTCTGCTGGTATTGAAAGGCAAGGAG
CTAAAGCTGGCCAGCGCTGGCGACGCACTCGCGCAACATCAACGACTACA
CTTGGAGGTAGAGGCCCTTCGAGCAGAAGTCCGCGCCGGGGAGAAGCAAG
TGCAGGAGTGCGCAAATCGACTGACGAGGGCCGAGGCAACGTTATCAGGG
CCATTGAAGGCTGCCAAGCAGTTACTCGAGGCCGGGCGGAAAGCGGAGGG
GGTCGCGCAACATCAACGACTACACTTGGAGGTAGAGGCCCTTCGAGCAG
AAGTCCGCGCCGGGGAGAAGCAAGTGCAGGAGTGCGCAAATCGACTGACG
AGGGCCGAGGCAACGTTATCAGGGCCATTGAAGGCTGCCAAGCAGTTACT
CGAGGCCGGGCGGAAAGCGGAGGGGGGGGAGATTTATGTTGCAGATGTAG
TGGACTACGCGCAACGGATTAGTGGAATGACATCGGCGCCGTCATACTGG
AAGCCTGGGATGGCGATGGTCGGTTTCGCGCCACCCGCTCCGCGACCTGA
GATGATGCGAGCGGGTGCCCTTAGTGCTTTCGCGGTCACCACAGGGGAGA
TTTATGTTGCAGATGTAGTGGACTACGCGCAACGGATTAGTGGAATGACA
TCGGCGCCGTCATACTGGAAGCCTGGGATGGCGATGGTCGGTTTCGCGCC
ACCCGCTCCGCGACCTGAGATGATGCGAGCGGGTGCCCTTAGTGCTTTCG
CGGTCACCACAGGCACTTCGCTCTCCGCGGAGAAACTCTTGAAAATTGCC
GAGGGATTGGACAAACCGCCAGATAAAGCGGCTTTGGATGACACGAACGG
GCGTAGTTCAGATAGCACGAGCGATGATAACAGTAGTTCAGAAATATTAC
CAAATGGGACGAAGAAAGCGGGCGATGGGAAGAGAGACGAGGATGGGAAG
TCCAGGAAGACAAAGGAGGCGGAAGCCAAACGAACGGCGGCCGGGAAAGC
GGGGGCGAGTAGTAATAGCGTGGGGGGTTTATCGGGTATCTTTTCGCGAG
ATTCGGCCCCAGAAAAGCCAAAGATCTCTCTCGATATTAGCGACGATAGC
GACAGCGATGAGGATGATGATAGCGATTAAGCACTTCGCTCTCCGCGGAG
AAACTCTTGAAAATTGCCGAGGGATTGGACAAACCGCCAGATAAAGCGGC
TTTGGATGACACGAACGGGCGTAGTTCAGATAGCACGAGCGATGATAACA
GTAGTTCAGAAATATTACCAAATGGGACGAAGAAAGCGGGCGATGGGAAG
AGAGACGAGGATGGGAAGTCCAGGAAGACAAAGGAGGCGGAAGCCAAACG
AACGGCGGCCGGGAAAGCGGGGGCGAGTAGTAATAGCGTGGGGGGTTTAT
CGGGTATCTTTTCGCGAGATTCGGCCCCAGAAAAGCCAAAGATCTCTCTC
GATATTAGCGACGATAGCGACAGCGATGAGGATGATGATAGCGATTAA
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