prot_H-paniculata_contig18567.4579.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18567.4579.1
Unique Nameprot_H-paniculata_contig18567.4579.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length134
Homology
BLAST of mRNA_H-paniculata_contig18567.4579.1 vs. uniprot
Match: D7FQT5_ECTSI (SRP101, alpha subunit of the signal recognition particle receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQT5_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 1.080e-73
Identity = 121/134 (90.30%), Postives = 130/134 (97.01%), Query Frame = 0
Query:    1 RVNTAVQSALKDAVSRVLTPKKSTDVLREVKATKSRGKVYSMAFVGINGVGKSTSLAKVAYYLKENGIKVLIAACDTFRSGAVEQLRVHGRCLEIPIFEKGYAKDSSSVARDALKHAEEEGYDCVLIDTAGRMQ 134
            RV TAVQSALK+AVSRVLTPKKSTDVLREVKA +SRGKVYSMAFVGINGVGKSTSLAKVAYYLKENGIKVLIAACDTFRSGAVEQLRVH RCL++P+FEKGYA+DSS+VAR+A+KHA EEGYDCVLIDTAGRMQ
Sbjct:  345 RVKTAVQSALKEAVSRVLTPKKSTDVLREVKAARSRGKVYSMAFVGINGVGKSTSLAKVAYYLKENGIKVLIAACDTFRSGAVEQLRVHCRCLDVPLFEKGYARDSSAVAREAVKHAAEEGYDCVLIDTAGRMQ 478          
BLAST of mRNA_H-paniculata_contig18567.4579.1 vs. uniprot
Match: A0A418FD97_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FD97_9STRA)

HSP 1 Score: 190 bits (482), Expect = 5.790e-58
Identity = 89/134 (66.42%), Postives = 114/134 (85.07%), Query Frame = 0
Query:    1 RVNTAVQSALKDAVSRVLTPKKSTDVLREVKATKSRGKVYSMAFVGINGVGKSTSLAKVAYYLKENGIKVLIAACDTFRSGAVEQLRVHGRCLEIPIFEKGYAKDSSSVARDALKHAEEEGYDCVLIDTAGRMQ 134
            R+ T VQ+AL+ A+ R+LTPKKSTDVLR+V A + +G+ YS+ FVG+NGVGKSTSL+KVAYYLK  G+K++IAACDTFRSGAVEQL  H + L++P+FE+GYAKD +SVA+DA+ H  + G+DCVLIDTAGRMQ
Sbjct:   93 RIQTVVQTALEAALLRILTPKKSTDVLRQVLAARDQGRCYSIVFVGVNGVGKSTSLSKVAYYLKSRGVKIMIAACDTFRSGAVEQLNQHCKVLDVPLFERGYAKDPASVAKDAIAHGNDHGFDCVLIDTAGRMQ 226          
BLAST of mRNA_H-paniculata_contig18567.4579.1 vs. uniprot
Match: A0A397AFG7_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AFG7_9STRA)

HSP 1 Score: 190 bits (482), Expect = 2.460e-57
Identity = 89/134 (66.42%), Postives = 114/134 (85.07%), Query Frame = 0
Query:    1 RVNTAVQSALKDAVSRVLTPKKSTDVLREVKATKSRGKVYSMAFVGINGVGKSTSLAKVAYYLKENGIKVLIAACDTFRSGAVEQLRVHGRCLEIPIFEKGYAKDSSSVARDALKHAEEEGYDCVLIDTAGRMQ 134
            R+ T VQ+AL+ A+ R+LTPKKSTDVLR+V A + +G+ YS+ FVG+NGVGKSTSL+KVAYYLK  G+K++IAACDTFRSGAVEQL  H + L++P+FE+GYAKD +SVA+DA+ H  + G+DCVLIDTAGRMQ
Sbjct:  145 RIQTVVQTALEAALLRILTPKKSTDVLRQVLAARDQGRCYSIVFVGVNGVGKSTSLSKVAYYLKSRGVKIMIAACDTFRSGAVEQLNQHCKVLDVPLFERGYAKDPASVAKDAIAHGNDHGFDCVLIDTAGRMQ 278          
BLAST of mRNA_H-paniculata_contig18567.4579.1 vs. uniprot
Match: A0A7S3Y919_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y919_HETAK)

HSP 1 Score: 187 bits (474), Expect = 2.050e-56
Identity = 90/130 (69.23%), Postives = 115/130 (88.46%), Query Frame = 0
Query:    5 AVQSALKDAVSRVLTPKKSTDVLREVKATKSRGKVYSMAFVGINGVGKSTSLAKVAYYLKENGIKVLIAACDTFRSGAVEQLRVHGRCLEIPIFEKGYAKDSSSVARDALKHAEEEGYDCVLIDTAGRMQ 134
            A ++AL++AV RVLTPK+  D+LREV A +++G+ +++AFVG+NGVGKSTSLAKVAYYL+E+G KVL+AACDTFRSGAVEQL VH RCL++P+FEKGYAKD ++VA  AL+HA E+G+D VLIDTAGRMQ
Sbjct:   72 AAKAALREAVLRVLTPKRPVDLLREVHAAQAKGRPFAVAFVGVNGVGKSTSLAKVAYYLREHGCKVLLAACDTFRSGAVEQLGVHARCLDVPLFEKGYAKDPAAVAVAALEHAREQGFDAVLIDTAGRMQ 201          
BLAST of mRNA_H-paniculata_contig18567.4579.1 vs. uniprot
Match: A0A8K1FLZ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLZ4_PYTOL)

HSP 1 Score: 191 bits (484), Expect = 3.490e-55
Identity = 91/134 (67.91%), Postives = 113/134 (84.33%), Query Frame = 0
Query:    1 RVNTAVQSALKDAVSRVLTPKKSTDVLREVKATKSRGKVYSMAFVGINGVGKSTSLAKVAYYLKENGIKVLIAACDTFRSGAVEQLRVHGRCLEIPIFEKGYAKDSSSVARDALKHAEEEGYDCVLIDTAGRMQ 134
            RV+T V+ AL+ A+ R+LTPKKSTDVLRE+   K+ G+ YS+ FVG+NGVGKSTSL+KV YYLK  G+KV+IAACDTFRSGAVEQL  H + L++P+FEKGYA+D ++VARDA+K+  E GYDCVLIDTAGRMQ
Sbjct:  358 RVSTVVRKALEAALLRILTPKKSTDVLREIMDAKAAGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVKVMIAACDTFRSGAVEQLNQHAKVLDVPLFEKGYARDPAAVARDAVKYGTENGYDCVLIDTAGRMQ 491          
BLAST of mRNA_H-paniculata_contig18567.4579.1 vs. uniprot
Match: A0A485LAK6_9STRA (Aste57867_18399 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAK6_9STRA)

HSP 1 Score: 190 bits (483), Expect = 3.590e-55
Identity = 90/134 (67.16%), Postives = 112/134 (83.58%), Query Frame = 0
Query:    1 RVNTAVQSALKDAVSRVLTPKKSTDVLREVKATKSRGKVYSMAFVGINGVGKSTSLAKVAYYLKENGIKVLIAACDTFRSGAVEQLRVHGRCLEIPIFEKGYAKDSSSVARDALKHAEEEGYDCVLIDTAGRMQ 134
            R+ T VQ AL+ A+ R+LTPKKSTDVLREV A + +G+ YS+ FVG+NGVGKSTSL+KV YYLK  G+K++IAACDTFRSGAVEQL  H + L++P+FE+GYAKD ++VARDA+ H  E G+DCVLIDTAGRMQ
Sbjct:  339 RIQTVVQKALEAALLRILTPKKSTDVLREVLAAREQGRCYSIVFVGVNGVGKSTSLSKVCYYLKSRGVKIMIAACDTFRSGAVEQLNQHCKVLDVPLFERGYAKDPATVARDAIAHGNEHGFDCVLIDTAGRMQ 472          
BLAST of mRNA_H-paniculata_contig18567.4579.1 vs. uniprot
Match: W4GVN3_9STRA (SRP54 domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GVN3_9STRA)

HSP 1 Score: 190 bits (483), Expect = 3.830e-55
Identity = 89/134 (66.42%), Postives = 114/134 (85.07%), Query Frame = 0
Query:    1 RVNTAVQSALKDAVSRVLTPKKSTDVLREVKATKSRGKVYSMAFVGINGVGKSTSLAKVAYYLKENGIKVLIAACDTFRSGAVEQLRVHGRCLEIPIFEKGYAKDSSSVARDALKHAEEEGYDCVLIDTAGRMQ 134
            R+ T VQ+AL+ A+ R+LTPKKSTDVLR+V A + +G+ YS+ FVG+NGVGKSTSL+KVAYYLK  G+K++IAACDTFRSGAVEQL  H + L++P+FE+GYAKD +SVA+DA+ H  + G+DCVLIDTAGRMQ
Sbjct:  343 RIQTVVQTALEGALLRILTPKKSTDVLRQVLAARDQGRCYSIVFVGVNGVGKSTSLSKVAYYLKSRGVKIMIAACDTFRSGAVEQLNQHCKVLDVPLFERGYAKDPASVAKDAIAHGNDHGFDCVLIDTAGRMQ 476          
BLAST of mRNA_H-paniculata_contig18567.4579.1 vs. uniprot
Match: A0A6G0WUE0_9STRA (SRP54 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUE0_9STRA)

HSP 1 Score: 189 bits (480), Expect = 1.160e-54
Identity = 90/134 (67.16%), Postives = 112/134 (83.58%), Query Frame = 0
Query:    1 RVNTAVQSALKDAVSRVLTPKKSTDVLREVKATKSRGKVYSMAFVGINGVGKSTSLAKVAYYLKENGIKVLIAACDTFRSGAVEQLRVHGRCLEIPIFEKGYAKDSSSVARDALKHAEEEGYDCVLIDTAGRMQ 134
            R+ T VQ AL+ A+ R+LTPKKSTDVLREV A + +G+ YS+ FVG+NGVGKSTSL+KV YYLK  G+K++IAACDTFRSGAVEQL  H + L++P+FE+GYAKD +SVARDA+ +  E G+DCVLIDTAGRMQ
Sbjct:  349 RIQTVVQKALEAALLRILTPKKSTDVLREVLAAREQGRCYSIVFVGVNGVGKSTSLSKVCYYLKSRGVKIMIAACDTFRSGAVEQLNQHCKVLDVPLFERGYAKDPASVARDAIAYGNENGFDCVLIDTAGRMQ 482          
BLAST of mRNA_H-paniculata_contig18567.4579.1 vs. uniprot
Match: A0A662XUH7_9STRA (SRP54 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XUH7_9STRA)

HSP 1 Score: 189 bits (480), Expect = 1.360e-54
Identity = 89/134 (66.42%), Postives = 112/134 (83.58%), Query Frame = 0
Query:    1 RVNTAVQSALKDAVSRVLTPKKSTDVLREVKATKSRGKVYSMAFVGINGVGKSTSLAKVAYYLKENGIKVLIAACDTFRSGAVEQLRVHGRCLEIPIFEKGYAKDSSSVARDALKHAEEEGYDCVLIDTAGRMQ 134
            R++T V+ AL+ A+ R+LTPKKSTDVLRE+   K+ G+ YS+ FVG+NGVGKSTSL+KV YYLK  G+ V+IAACDTFRSGAVEQL  H + L++P+FEKGYAKD +SVA+DA+K+  + GYDCVLIDTAGRMQ
Sbjct:  353 RISTVVRKALEAALLRILTPKKSTDVLREILEAKAEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVPLFEKGYAKDPASVAKDAIKYGTDNGYDCVLIDTAGRMQ 486          
BLAST of mRNA_H-paniculata_contig18567.4579.1 vs. uniprot
Match: A0A5D6Y7Z3_9STRA (SRP54 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7Z3_9STRA)

HSP 1 Score: 189 bits (480), Expect = 1.510e-54
Identity = 90/134 (67.16%), Postives = 114/134 (85.07%), Query Frame = 0
Query:    1 RVNTAVQSALKDAVSRVLTPKKSTDVLREVKATKSRGKVYSMAFVGINGVGKSTSLAKVAYYLKENGIKVLIAACDTFRSGAVEQLRVHGRCLEIPIFEKGYAKDSSSVARDALKHAEEEGYDCVLIDTAGRMQ 134
            RV+T V+ AL+ A+ R+LTPKKSTDVLRE+ A K+ G+ YS+ FVG+NGVGKSTSL+KV YYLK  G+KVLIAACDTFRSGAVEQL  H + L++P+F+KGYAKD ++VA++A+K+  E G+DCVLIDTAGRMQ
Sbjct:  366 RVSTVVRKALEAALLRILTPKKSTDVLREILAAKAAGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVKVLIAACDTFRSGAVEQLNQHAKVLDVPLFQKGYAKDPAAVAKEAVKYGTENGFDCVLIDTAGRMQ 499          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18567.4579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQT5_ECTSI1.080e-7390.30SRP101, alpha subunit of the signal recognition pa... [more]
A0A418FD97_9STRA5.790e-5866.42Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A397AFG7_9STRA2.460e-5766.42Uncharacterized protein (Fragment) n=2 Tax=Aphanom... [more]
A0A7S3Y919_HETAK2.050e-5669.23Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8K1FLZ4_PYTOL3.490e-5567.91Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A485LAK6_9STRA3.590e-5567.16Aste57867_18399 protein n=1 Tax=Aphanomyces stella... [more]
W4GVN3_9STRA3.830e-5566.42SRP54 domain-containing protein n=4 Tax=Aphanomyce... [more]
A0A6G0WUE0_9STRA1.160e-5467.16SRP54 domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A662XUH7_9STRA1.360e-5466.42SRP54 domain-containing protein n=2 Tax=Nothophyto... [more]
A0A5D6Y7Z3_9STRA1.510e-5467.16SRP54 domain-containing protein n=1 Tax=Pythium br... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainSMARTSM00962SRP54_3coord: 39..134
e-value: 4.6E-9
score: -15.4
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPFAMPF00448SRP54coord: 42..134
e-value: 1.1E-32
score: 113.2
NoneNo IPR availableGENE3D3.40.50.300coord: 23..134
e-value: 1.3E-42
score: 147.8
NoneNo IPR availablePANTHERPTHR43134:SF1SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHAcoord: 1..134
NoneNo IPR availablePANTHERPTHR43134FAMILY NOT NAMEDcoord: 1..134
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 40..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18567contigH-paniculata_contig18567:387..4426 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18567.4579.1mRNA_H-paniculata_contig18567.4579.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18567 387..4426 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18567.4579.1 ID=prot_H-paniculata_contig18567.4579.1|Name=mRNA_H-paniculata_contig18567.4579.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp
RVNTAVQSALKDAVSRVLTPKKSTDVLREVKATKSRGKVYSMAFVGINGV
GKSTSLAKVAYYLKENGIKVLIAACDTFRSGAVEQLRVHGRCLEIPIFEK
GYAKDSSSVARDALKHAEEEGYDCVLIDTAGRMQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000897SRP54_GTPase_dom
IPR027417P-loop_NTPase