prot_H-paniculata_contig18555.4575.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18555.4575.1
Unique Nameprot_H-paniculata_contig18555.4575.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length120
Homology
BLAST of mRNA_H-paniculata_contig18555.4575.1 vs. uniprot
Match: D7FTZ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ2_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 2.690e-48
Identity = 87/120 (72.50%), Postives = 103/120 (85.83%), Query Frame = 0
Query:    1 QAALVSLALYVLQHPETLGETIVLGKKLVQSILDDPDTVQQVTDMSLKVMSDARFQKGAADLVVAVGQSDEVYGAVTELASRVIQDPKVRETLSAMLSASSHKVLEDQEVLDHSKEFVAQ 120
            QAALVSLALYVLQHP+T  ET VL KKL+++ILDDPDTV QVTDM LKV+   +F++GA++LVVA+GQS EVYGAV +LASRVIQDPKV+ TLS +LSASS +VL+DQ V DHSK FVAQ
Sbjct:   53 QAALVSLALYVLQHPDTRAETKVLAKKLIKAILDDPDTVLQVTDMVLKVIRTPQFRQGASELVVALGQSQEVYGAVVDLASRVIQDPKVQATLSTVLSASSREVLQDQVVFDHSKVFVAQ 172          
BLAST of mRNA_H-paniculata_contig18555.4575.1 vs. uniprot
Match: A0A6H5K116_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K116_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 1.960e-23
Identity = 61/120 (50.83%), Postives = 76/120 (63.33%), Query Frame = 0
Query:    1 QAALVSLALYVLQHPETLGETIVLGKKLVQSILDDPDTVQQVTDMSLKVMSDARFQKGAADLVVAVGQSDEVYGAVTELASRVIQDPKVRETLSAMLSASSHKVLEDQEVLDHSKEFVAQ 120
            QAALVSLALYVLQHP+T                       QVTDM+LKV+ + +F++GA++LVVA+GQS+EVYGA             V+ TLS +LSASS +VL+DQ V DHSK FVAQ
Sbjct:  328 QAALVSLALYVLQHPDTRAXXXXXXXXXXXXXXXXXXXXXQVTDMALKVIRNPQFRQGASELVVALGQSEEVYGAXXXXXXXXXXXXXVQATLSTVLSASSREVLQDQVVFDHSKVFVAQ 447          
BLAST of mRNA_H-paniculata_contig18555.4575.1 vs. uniprot
Match: A0A835YV69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV69_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.980e-12
Identity = 44/120 (36.67%), Postives = 69/120 (57.50%), Query Frame = 0
Query:    1 QAALVSLALYVLQHPETLGETIVLGKKLVQSILDDPDTVQQVTDMSLKVMSDARFQKGAADLVVAVGQSDEVYGAVTELASRVIQDPKVRETLSAMLSASSHKVLEDQEVLDHSKEFVAQ 120
            QAA+VSLA +VLQHP+TL E   L +KL+  ++ +       T  +  V++  +       L       D VY A  ++ SR+I +P+V+E +S +++  SH VL D +VL H K+FVA+
Sbjct:  103 QAAIVSLASHVLQHPDTLQEVHALAQKLIAQLVKEA----AATLRTCTVLASLKHTHLKCIL-------DHVYEAFLDMVSRIIAEPRVKEQVSLIMADGSHHVLADADVLQHGKDFVAE 211          
BLAST of mRNA_H-paniculata_contig18555.4575.1 vs. uniprot
Match: W7TJZ8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJZ8_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 3.780e-8
Identity = 28/50 (56.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:   71 EVYGAVTELASRVIQDPKVRETLSAMLSASSHKVLEDQEVLDHSKEFVAQ 120
            +VY AV EL++R++ +PKV   ++ +L ASSHKVLED +V+DHSK FVA+
Sbjct:   23 QVYTAVVELSARLVAEPKVLTAVNELLLASSHKVLEDPQVVDHSKTFVAE 72          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18555.4575.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FTZ2_ECTSI2.690e-4872.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K116_9PHAE1.960e-2350.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YV69_9STRA1.980e-1236.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TJZ8_9STRA3.780e-856.00Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37935FAMILY NOT NAMEDcoord: 2..118
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18555contigH-paniculata_contig18555:152..3143 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18555.4575.1mRNA_H-paniculata_contig18555.4575.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18555 152..3143 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18555.4575.1 ID=prot_H-paniculata_contig18555.4575.1|Name=mRNA_H-paniculata_contig18555.4575.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=120bp
QAALVSLALYVLQHPETLGETIVLGKKLVQSILDDPDTVQQVTDMSLKVM
SDARFQKGAADLVVAVGQSDEVYGAVTELASRVIQDPKVRETLSAMLSAS
SHKVLEDQEVLDHSKEFVAQ
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