prot_H-paniculata_contig1852.4565.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1852.4565.1
Unique Nameprot_H-paniculata_contig1852.4565.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length134
Homology
BLAST of mRNA_H-paniculata_contig1852.4565.1 vs. uniprot
Match: D7G276_ECTSI (Mitochondrial import inner membrane translocase subunit TIM23 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G276_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 4.990e-52
Identity = 83/131 (63.36%), Postives = 105/131 (80.15%), Query Frame = 0
Query:    2 GIAGGGAWGIREGFAKAPNRRPRVLMNSVMNSAGKKGSMYGNTLAVLAAYFTCFDAAFDYVGVDQIGPLAQAGVSDYVNPVLSGASTGLLYKSMAGPRVAGIAAVAGVGAVGAGFVADSVASSIFGRGFIF 132
            GI GGGA G+REGFAKAPNRR RVL+NS+MN AGKKGS YGNT AVLA Y+TC +   D+  VDQ+GP+ QAG+ + +NP+L+GASTGLLYKS AGPR+A +A+VAG+GAVG  +  D  ++S+ G+G IF
Sbjct:   76 GILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAVDKTSASVLGQGIIF 206          
BLAST of mRNA_H-paniculata_contig1852.4565.1 vs. uniprot
Match: A0A7S1XNQ0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNQ0_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.060e-30
Identity = 64/126 (50.79%), Postives = 83/126 (65.87%), Query Frame = 0
Query:    2 GIAGGGAWGIREGFAKAPNRRPRVLMNSVMNSAGKKGSMYGNTLAVLAAYFTCFDAAFDYVGVDQIGPLAQAGVSDYVNPVLSGASTGLLYKSMAGPRVAGIAAVAGVGAVGAGFVADSVASSIFG 127
            G+ GGG  G+ EG   +P+ R R+L NS+MN+AGK+GS  GN    +A +++ F A +D   VD      Q GV D+VNPVLSGASTGLLYKS AGPR A +AAV G G +GA F  + V S++ G
Sbjct:   66 GVIGGGGVGLMEGVRSSPSSRFRILFNSIMNNAGKRGSRAGNAFGCVALFYSGFLALYDGYNVDM-----QLGVGDWVNPVLSGASTGLLYKSTAGPRAAILAAVLGGGVIGASFGVEEVVSNMLG 186          
BLAST of mRNA_H-paniculata_contig1852.4565.1 vs. uniprot
Match: A0A835Z638_9STRA (Mitochondrial import inner membrane translocase subunit TIM23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z638_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 9.040e-20
Identity = 49/126 (38.89%), Postives = 80/126 (63.49%), Query Frame = 0
Query:    2 GIAGGGAWGIREGFAKAPNRRPRVLMNSVMNSAGKKGSMYGNTLAVLAAYFTCFDAAFDYVGVDQIGPLAQAGVSDYVNPVLSGASTGLLYKSMAGPRVAGIAAVAGVGAVGAGFVADSVASSIFG 127
            GI GGG +G+ EG   AP+ R R+ +N+++N+AGK+GS  GNTLAVLA ++T F+  FD + VD     A+ G +++++PVL+G++   L+ +    R   +A VAG   +GA ++  +   S+ G
Sbjct:   82 GIIGGGGYGVLEGARTAPSSRARIRVNAILNAAGKRGSRAGNTLAVLAMFYTGFEFMFDSLEVD-----AKVGDAEWLHPVLAGSAAMTLFYTGKNVRTMALAGVAGGAGMGALYLGTTALGSLIG 202          
BLAST of mRNA_H-paniculata_contig1852.4565.1 vs. uniprot
Match: A0A4D9D4E0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4E0_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.400e-16
Identity = 51/114 (44.74%), Postives = 67/114 (58.77%), Query Frame = 0
Query:    2 GIAGGGAWGIREGFAKAPNRRPRVLMNSVMNSAGKKGSMYGNTLAVLAAYFTCFDAAFDYVGVDQIGPLAQAGVSDYVNPVLSGASTGLLYKSMAGPRVAGIAAVAGVGAVGAG 115
            GI  GG  G R G+  AP+ R  + +NSVMN AGK GS +GN   V A  ++  ++  D+   D++      G    VNPVLSGA +GLLYKS A PR A +A+V  +G  GAG
Sbjct:   72 GILTGGILGGRTGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESLLDHFETDKV-----LGGHQAVNPVLSGAISGLLYKSTAAPRTAALASV--LGGFGAG 178          
BLAST of mRNA_H-paniculata_contig1852.4565.1 vs. uniprot
Match: W7TXH2_9STRA (Mitochondrial import inner membrane translocase subunit tim23 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXH2_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 5.510e-16
Identity = 51/114 (44.74%), Postives = 67/114 (58.77%), Query Frame = 0
Query:    2 GIAGGGAWGIREGFAKAPNRRPRVLMNSVMNSAGKKGSMYGNTLAVLAAYFTCFDAAFDYVGVDQIGPLAQAGVSDYVNPVLSGASTGLLYKSMAGPRVAGIAAVAGVGAVGAG 115
            GI  GG  G R G+  AP+ R  + +NSVMN AGK GS +GN   V A  ++  ++  D+   D++      G    VNPVLSGA +GLLYKS A PR A +A+V  +G  GAG
Sbjct:  138 GILTGGILGGRRGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESLLDHFETDKV-----LGGHQAVNPVLSGAISGLLYKSTAAPRTAALASV--LGGFGAG 244          
BLAST of mRNA_H-paniculata_contig1852.4565.1 vs. uniprot
Match: A0A0B7NJS0_9FUNG (Uncharacterized protein n=6 Tax=Mucoraceae TaxID=34489 RepID=A0A0B7NJS0_9FUNG)

HSP 1 Score: 68.2 bits (165), Expect = 2.580e-11
Identity = 41/113 (36.28%), Postives = 61/113 (53.98%), Query Frame = 0
Query:    2 GIAGGGAWGIREGFAKAPNRRPRVLMNSVMNSAGKKGSMYGNTLAVLAAYFTCFDAAFDYVGVDQIGPLAQAGVSDYVNPVLSGASTGLLYKSMAGPRVAGIAAVAGVGAVGA 114
            G+  GGA+G+ EG  K+    PRV +N+ +NS  ++G   GN + V+A  +   ++  DY            G  D  N + +GA +G ++KS AGPRVAGI+A    G  GA
Sbjct:  107 GLTLGGAYGMMEGLKKSSGA-PRVRLNTTLNSITRRGPGVGNAVGVIAMVYNGTNSLIDY----------SRGTHDIFNSLAAGAISGAMFKSTAGPRVAGISAAVCAGVAGA 208          
BLAST of mRNA_H-paniculata_contig1852.4565.1 vs. uniprot
Match: R1E8Y9_EMIHU (Uncharacterized protein n=4 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E8Y9_EMIHU)

HSP 1 Score: 67.0 bits (162), Expect = 4.080e-11
Identity = 38/107 (35.51%), Postives = 60/107 (56.07%), Query Frame = 0
Query:    1 MGIAGGGAWGIREGFAKAPNRRPRVLMNSVMNSAGKKGSMYGNTLAVLAAYFTCFDA-AFDYVGVDQIGPLAQAGVSDYVNPVLSGASTGLLYKSMAGPRVAGIAAV 106
            +G+  GG+WG+ EG   +   R R+ +N+V+N+ GK G   GN++  L   F+ F+  AF++ G D           D +N + +GA  G ++KS AG R AG AA+
Sbjct:   72 VGLVAGGSWGLYEGLKSSTGERQRIRINAVLNATGKHGPGLGNSVGCLGMMFSTFETLAFNFRGED-----------DMLNVMGAGALAGGIFKSQAGLRTAGTAAL 167          
BLAST of mRNA_H-paniculata_contig1852.4565.1 vs. uniprot
Match: A0A812WLG3_9DINO (Tim23 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812WLG3_9DINO)

HSP 1 Score: 66.2 bits (160), Expect = 3.010e-10
Identity = 41/129 (31.78%), Postives = 66/129 (51.16%), Query Frame = 0
Query:    2 GIAGGGAWGIREGFAKAPNRRPRVLMNSVMNSAGKKGSMYGNTLAVLAAYFTCFDAAFDYVGVDQIGPLAQAGVSDYVNPVLSGASTGLLYK--------SMAGPRVAGIAAVAGVGAV-GAGFVADSV 121
            G+A G  +GI EG AKAP RR R+++NSV+N+ GK+GS  GN +  LA  ++  +   DY+  D           +    + + A T   ++        ++ G  + G++A+ G G V G G V  +V
Sbjct:  156 GVAMGSFYGIFEGAAKAPKRRARIVLNSVLNAVGKRGSGLGNAIGTLALLYSATEWGLDYIDFDMAPDAFDMRRREIYTQMAAAAITAGTFRLPQLVARRNLTGVAIVGVSALMGAGLVAGLGAVGSAV 284          
BLAST of mRNA_H-paniculata_contig1852.4565.1 vs. uniprot
Match: A0A058Z513_FONAL (Uncharacterized protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058Z513_FONAL)

HSP 1 Score: 62.4 bits (150), Expect = 2.230e-9
Identity = 34/104 (32.69%), Postives = 51/104 (49.04%), Query Frame = 0
Query:    1 MGIAGGGAWGIREGF---AKAPNRRPRVLMNSVMNSAGKKGSMYGNTLAVLAAYFTCFDAAFDYVGVDQIGPLAQAGVSDYVNPVLSGASTGLLYKSMAGPRVA 101
            +G+  GG WG  EGF      P     +L+N+ +N   ++G   GN +AV+   F   D   DY            G   + N +++G  TGLL +S++GPRVA
Sbjct:   61 IGLGIGGTWGAVEGFRYGTSLPQTGRSLLVNATLNGITRRGPFLGNNMAVVGFSFAAIDTMLDYA----------TGEQSHTNRIIAGGLTGLLLRSLSGPRVA 154          
BLAST of mRNA_H-paniculata_contig1852.4565.1 vs. uniprot
Match: A0A6I8U7F1_AEDAE (Uncharacterized protein n=1 Tax=Aedes aegypti TaxID=7159 RepID=A0A6I8U7F1_AEDAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.290e-8
Identity = 39/100 (39.00%), Postives = 51/100 (51.00%), Query Frame = 0
Query:    1 MGIAGGGAWGIREGFAKAPNRRPRVLMNSVMNSAGKKGSMYGNTLAVLAAYFTCFDAAFDYVGVDQIGPLAQAGVSDYVNPVLSGASTGLLYKSMAG-PR 99
            +G AGGGA+GI EGFA   N R RV +  + N   K+G   GNTL V+A  +      F          LA+ G  D  N + +G  TGL+ +S  G PR
Sbjct:  125 VGFAGGGAYGIAEGFAAIFNNRGRVRVTQIFNHFLKRGRSLGNTLGVVALLYCSTGVLFH---------LARGGKDDAWNTIAAGGVTGLMMESSKGLPR 215          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1852.4565.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7G276_ECTSI4.990e-5263.36Mitochondrial import inner membrane translocase su... [more]
A0A7S1XNQ0_9STRA1.060e-3050.79Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A835Z638_9STRA9.040e-2038.89Mitochondrial import inner membrane translocase su... [more]
A0A4D9D4E0_9STRA2.400e-1644.74Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TXH2_9STRA5.510e-1644.74Mitochondrial import inner membrane translocase su... [more]
A0A0B7NJS0_9FUNG2.580e-1136.28Uncharacterized protein n=6 Tax=Mucoraceae TaxID=3... [more]
R1E8Y9_EMIHU4.080e-1135.51Uncharacterized protein n=4 Tax=Emiliania huxleyi ... [more]
A0A812WLG3_9DINO3.010e-1031.78Tim23 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A058Z513_FONAL2.230e-932.69Uncharacterized protein n=1 Tax=Fonticula alba Tax... [more]
A0A6I8U7F1_AEDAE1.290e-839.00Uncharacterized protein n=1 Tax=Aedes aegypti TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 1..116
e-value: 3.9E-13
score: 49.7
NoneNo IPR availablePANTHERPTHR15371:SF0MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-RELATEDcoord: 1..114
NoneNo IPR availablePANTHERPTHR15371TIM23coord: 1..114
NoneNo IPR availableTMHMMTMhelixcoord: 100..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1852contigH-paniculata_contig1852:16619..20893 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1852.4565.1mRNA_H-paniculata_contig1852.4565.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1852 15311..21583 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1852.4565.1 ID=prot_H-paniculata_contig1852.4565.1|Name=mRNA_H-paniculata_contig1852.4565.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp
MGIAGGGAWGIREGFAKAPNRRPRVLMNSVMNSAGKKGSMYGNTLAVLAA
YFTCFDAAFDYVGVDQIGPLAQAGVSDYVNPVLSGASTGLLYKSMAGPRV
AGIAAVAGVGAVGAGFVADSVASSIFGRGFIFQ*
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