mRNA_H-paniculata_contig1852.4564.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1852.4564.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 413 bits (1061), Expect = 4.170e-126 Identity = 249/588 (42.35%), Postives = 346/588 (58.84%), Query Frame = 2
Query: 740 KELPSTGEVLVALQSIGHNVESASSNRNELVALRDRCSYLTACVIVKCRGSSNNVDVSPLVDRVNEVEDLVRRCCGRGRVGMAMRASVDKRDVAELHDRLNELTLSMGLTGIVAVEERLDDLKELLSMMKEKRPALTDMTPKNITTKSSSVKKRSSVPKGTPARQCWHVTRDCVIKRVVKIVIEGIRGRDGSGGVGVGGHEGRRVVGLVGESGSGTTTAASELVRRSVVRELFPDGIVWLNVGNGAKGRLRCLMHDLASMVHEVVGGGKGKPPPADSFSCEGYSSAAYIKEMVTTTAAVATKGQGHGHRR--CLLVADDVWDAEVISELRATGMWILVTTHREDLIKGAKGETVRVEKLSQDDAEAVLRRASGIPAGMHLPEAARDLSELCGYVAMDVAFVGRWNTVCGRGDRLAWSDAAASIRMELDAQNYDDAVTTTGGGAPRMKLRAAVLRAGFDELS--AEGYLVQWLYMALAVMPDAHAFSVMDAAALLYDSECEIDDLEPIKSVVDTLERWSILRADGSPSAVLDMTQGWWRTHKYRMHAAHCMFARENLVDRVDVLGPAVRRWVRHISSPEAVHEISPIVL 2491
+ELP V L++I VE+ +NR EL AL RC+Y+TAC +VKCR + VDV+PL D V ++ RC RG+V ++A DK ++A L+ ++ LT +GL GI +E ++DD+K+ L + ++ +L S K ++VP G P R+ WHV R + + V++ + G D + VV L G SGSG TT A+E+VR + VRE F DGIVWL V GAK RL LM LA MVHE +GG G+ P A SA YIK+ + +GH RR CL+VAD+VW+ +V+S+L TGMW+L++T E ++K ++G+ V V++LSQ DAE+VL+RA+ +P LP+ A DL +LCG VAMDVAFVGRW+TV GR D +WSDAA++IR E++ +D + P K R A+L+ GF++L+ ++ VQ LY++LAVMPD HAFS+ DAA LLYD +D VVD LERWSI+R+ QG YRMH AH FARE L+DR V PA++RW R++SS + + VL
Sbjct: 35 EELPVIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRLIESEVDVAPLKDCVEAAKNFAERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTLDRIDQRLESLP-----------RSFGKLAAVPMGAPVRKSWHVER----RHAMATVLDALNGSDRA-----------CVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASE------DSATYIKQRLE---------EGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDPD-NDSAENIPA-KRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEASAGGVVDVLERWSIIRS----------AQG-----TYRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVL 564
BLAST of mRNA_H-paniculata_contig1852.4564.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 407 bits (1047), Expect = 1.090e-123 Identity = 255/616 (41.40%), Postives = 358/616 (58.12%), Query Frame = 2
Query: 701 AATPLPSFLAAVRKELPSTGEVLVALQSIGHNVESASSNRNELVALRDRCSYLTACVIVKCRGSSNNVDVSPLVDRVNEVEDLVRRCCGRGRVGMAMRASVDKRDVAELHDRLNELTLSMGLTGIVAVEERL----DDLKELLSMMKEKRPALTDMTPKNITTKSSSVKKR--------SSVPKGTPARQCWHVTRDCVIKRVVKIVIEGIRGRDGSGGVGVGGHEGRRVVGLVGESGSGTTTAASELVRRSVVRELFPDGIVWLNVGNGAKGRLRCLMHDLASMVHEVVGGGKGKPPPADSFSCEGYSSAAYIKEMVTTTAAVATKGQGHGHR--RCLLVADDVWDAEVISELRATGMWILVTTHREDLIKGAKGETVRVEKLSQDDAEAVLRRASGIPAGMHLPEAARDLSELCGYVAMDVAFVGRWNTVCGRGDRLAWSDAAASIRMELDAQNYDDAVTTTGGGAPRMKLRAAVLRAGFDELS--AEGYLVQWLYMALAVMPDAHAFSVMDAAALLYDSECEIDDLEPIKSVVDTLERWSILRADGSPSAVLDMTQGWWRTHKYRMHAAHCMFARENLVDRVDVLGPAVRRWVRHISSPEAVHEISPIVLVEL 2500
AA + F+A + +ELP VL L+ I VE+ N +L L RC+Y+TAC IVKCR +DV+PL D VN VE V R RG++ ++A DK D+ +L +RL +L + L GI ++ + L + +E+ + + + K+ ++ ++ ++VPKGTP + WHV R + V + V + + D GG +VGLVG+SG+G TTAAS +V VVRE F DGIVWL V G L CLM LA MV E +GG G+ P S S +G AY+K+ V GHG + +CL+VAD+VW+++V+S+L TGMWIL++T E+L+K A GE V V++LS+ +AE+VLRRA+ + LP+ A+DL ELCG VAMD+AFVGRW+TV GR DR AWSDAA +R E+D + G R+ R A+L+AGF++L+ ++ VQ LY++LAV+PD HAF+V DAA LLYD E +D + VV+ LERW+I+R+ ++ T YRMH AH FARE+L+DR DV PA++R VR ISS EA+ I+ L L
Sbjct: 22 AAADVIQFVADLGEELPLLQPVLRTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCRHGYTELDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVER----RNVTETVFQAL---DADGGP--------HLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRP---SGSDDGL---AYVKQQVEN---------GHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVT--AESNGSEDSRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEASVGGVVEALERWTIIRS-------VEAT--------YRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHL 590
BLAST of mRNA_H-paniculata_contig1852.4564.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 396 bits (1018), Expect = 9.500e-120 Identity = 245/589 (41.60%), Postives = 347/589 (58.91%), Query Frame = 2
Query: 746 LPSTGEVLVALQSIGHNVESASSNRNELVALRDRCSYLTACVIVKCRGSS-NNVDVSPLVDRVNEVEDLVRRCCGRGRVGMAMRASVDKRDVAELHDRLNELTLSMGLTGIVAVEERLDDLKELLSMMKEKRPALTDMTPKN----ITTKSSSVKKRSSVPKGTPARQCWHVTRDCVIKRVVKIVIEGIRGRDGSGGVGVGGHEGRRVVGLVGESGSGTTTAASELVRRSVVRELFPDGIVWLNVGNGAKGRLRCLMHDLASMVHEVVGGGKGKPPPADSFSCEGYSSAAYIKEMVTTTAAVATKGQGHGHR--RCLLVADDVWDAEVISELRATGMWILVTTHREDLIKGAKGETVRVEKLSQDDAEAVLRRASGIPAGMHLPEAARDLSELCGYVAMDVAFVGRWNTVCGRGDRLAWSDAAASIRMEL---DAQNYDDAVTTTGGGAPRMKLRAAVLRAGFDELSA--EGYLVQWLYMALAVMPDAHAFSVMDAAALLYDSECEIDDLEPIKSVVDTLERWSILRADGSPSAVLDMTQGWWRTHKYRMHAAHCMFARENLVDRVDVLGPAVRRWVRHISSPEAVHEI 2476
LP VL L +I VE+ +N+ EL L RC YLTACV+VK R SS + +D++P+ + + +LV RC GRG++ + AS DK ++A + + +L + L G+ +E + DL ++ M + A +M N I S + K + +PK TP R+ WHV R V++RV + + VGG +VGLVG+SGSG TTAASE+VR + VR+ F DG+VWL V +GAK RL LM LA M+ E VGG +P +D AAYIKE + +GHG + +CL+VAD+VW+ EV+ +L TGMW+L++T E+L+ G++GE V V+++S+ +AE+VLR+AS +P LP+ A DL ELCG VAMD+AFVGRW+TV GR DR AWSDAA +R E+ + + V T R R AVL+AGF++L++ + VQ LY++LAV+PD F+V DAA LLYD + +D VV+ LERWS+LR+ + + WR Y +H AH FARE L+DR DV PA+ RW R+ISS + + +
Sbjct: 44 LPHLRPVLKTLTAIRETVENVQNNQEELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTA------------VGGPH---LVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEVGG--RRPATSDD-------GAAYIKEKMQ---------RGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVET-----RDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEASAAGVVEILERWSVLRS------IRGCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSV 588
BLAST of mRNA_H-paniculata_contig1852.4564.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 378 bits (971), Expect = 2.200e-114 Identity = 242/607 (39.87%), Postives = 343/607 (56.51%), Query Frame = 2
Query: 704 ATPLPSFLAAVRKELPSTGEVLVALQSIGHNVESASSNRNELVALRDRCSYLTACVIVKCRGSSNNVDVSPLVDRVNEVEDLVRRCCGRGRVGMAMRASVDKRDVAELHDRLNELTLSMGLTGIVAVEERLDDLKELLSMMKEKRPALTDMTPKN----ITTKSSSVKKRSSVPKGTPARQCWHVTRDCVIKRVVKIVIEGIRGRDGSGGVGVGGHEGRRVVGLVGESGSGTTTAASELVRRSVVRELFPDGIVWLNVGNGAKGRLRCLMHDLASMVHEVVGGGKGKPPPADSFSCEGYSSAAYIKEMVTTTAAVATKGQGHGHR--RCLLVADDVWDAEVISELRATGMWILVTTHREDLIKGAKGETV-RVEKLSQDDAEAVLRRASGIPAGMHLPEAARDLSELCGYVAMDVAFVGRWNTVCGRGDRLAWSDAAASIRMELDAQNYDDAVTTTGGGAPRMKLRAAVLRAGFDELS--AEGYLVQWLYMALAVMPDAHAFSVMDAAALLYD-SECEIDDLEPIKSVVDTLERWSILRADGSPSAVLDMTQGWWRTHKYRMHAAHCMFARENLVDRVDVLGPAVRRWVRHISSPEAVHEIS-PIVL 2491
A+ + +FL LP VL L+++ AL RC+Y+T CVIV+CR S+ + +PL++ VN V V RC RG + ++A+ DK ++A L RL +L + L GI V +++DLK LL + K+ T N S + ++VP GTPAR+ WHV R + V++ V + + G G R+VGLVG+SGSG TTAA+E+VR + VRE F DGIVWL+V +GA RLR LM LA +V E +GG G+ P AAY ++ + + GHG + +CL+VAD+VW+ VIS+L TGMW+L++T E L++ A+G V V++LS++DA +VLRRAS + + LP+ A +L ELCG VAMDVAFVGRW+TV GR DR AWSDAA +R +++ D V R R AVL+AGF++L+ ++ + LY++LAV+PD HAF+ DA ALLYD + C D++ + ++ TLERWS LR +G YRMH AH FAR+ ++DR V PAV+RW +SS + + P VL
Sbjct: 9 ASDVLAFLTEASDGLPLIEPVLKTLKAVXXXXXXXXXXXXXXAALYQRCTYITGCVIVRCRKGSSGLKATPLMECVNAVGAFVERCSRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVER----RHVMRAVCDALPGEGGP-----------RLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLD------DGAAYTRQRMQS---------GHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIERSRVSDNVWDI-----RAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVST-EELIRTLERWSALRTEGGA---------------YRMHDAHSGFARDCVMDRGYVRKPAVKRWTLRLSSLDVLRSFDDPFVL 564
BLAST of mRNA_H-paniculata_contig1852.4564.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE) HSP 1 Score: 340 bits (872), Expect = 5.410e-103 Identity = 232/565 (41.06%), Postives = 307/565 (54.34%), Query Frame = 2
Query: 797 VESASSNRNELVALRDRCSYLTACVIVKCR----GSSNNVDVSPLVDRVNEVEDLVRRCCGRGRVGMAMRASVDKRDVAELHDRLNELTLSMGLTGIVAVEERLDDLKELLSMMKEKRPALTDMTPKNITTKSSSVKKRSSVPKGTPARQCWHVTRDCVIKRVVKIVIEGIRGRDGSGGVGVGGHEGRRVVGLVGESGSGTTTAASELVRRSVVRELFPDGIVWLNVGNGAKGRLRCLMHDLASMVHEVVGGGKGKPPPADSFSCEGYSSAAYIKEMVTTTAAVATKGQGHGHR--RCLLVADDVWDAEVISELRATGMWILVTTHREDLIKGAKGETVRVEKLSQDDAEAVLRRASGIPAGMHLPEAARDLSELCGYVAMDVAFVGRWNTVCGRGDRLAWSDAAASIRMELDAQNYDDAVTTTGGGAPRMKLRAAVLRAGFDELS--AEGYLVQWLYMALAVMPDAHAFSVMDAAALLYDSECEIDDLEPIKSVVDTLERWSILRADGSPSAVLDMTQGWWRTHKYRMHAAHCMFARENLVDRVDVLGPAVRRWVRHISSPEAV 2467
VE+ R+EL AL RC+Y+TAC+I K R GS+ NV SPL D V E E V R R M V + A KELL+ + + D PK K++ VP+GTP R+ WHV R V + V+E + G G R+VGLVG+SG+G TTAA+ELVR +VVRE F DGIVWL V GA RL LM LA MV E +GG G P + + AYIK+ + GHG + +CL VAD+VW+ EV+S L TGM +L++T E+L+ GA+G VR+++LS DAE+VLR A+ +P + LP+ A DL +LCG VAMD+AFVGRW+TV GR DR+AWSDAAA +R E+ DD V G R A+L+AG ++L+ ++ VQ LY++LAV+PD V DAA LLYD + +D E + V+D LERWS+LR+ + +KY MH FAR +L+DR DV A+RRWV +ISS + V
Sbjct: 5 VETVYQTRDELAALEKRCTYMTACIIAKFRHAHPGSAPNV--SPLEDCVMEAEKFVER-----RKKRTMEQMVQNQAAAR---------------------------KELLA----NQEIIIDRLPKPPI-------KKAYVPQGTPTRKSWHVER-----HVTETVVEALTGEAGP-----------RLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNAD-----AYIKQRMEN---------GHGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAKIEGDDIVDGARGNR-----RKAILQAGLEDLAIGSDDERVQRLYLSLAVLPDDQGIQVHDAALLLYDRDPTAEDEESVARVLDVLERWSVLRSTWA--------------YKYYMHDVQSEFARASLMDRGDVRRHALRRWVGYISSLDTV 475
BLAST of mRNA_H-paniculata_contig1852.4564.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE) HSP 1 Score: 323 bits (827), Expect = 3.380e-93 Identity = 203/439 (46.24%), Postives = 265/439 (60.36%), Query Frame = 2
Query: 1181 SSSVKKRSSVPKGTPARQCWHVTRDCVIKRVVKIVIEGIRGRDGSGGVGVGGHEGRRVVGLVGESGSGTTTAASELVRRSVVRELFPDGIVWLNVGNGAKGRLRCLMHDLASMVHEVVGGGKGKPPPADSFSCEGYSSAAYIKEMVTTTAAVATKGQGHGHRRCLLVADDVWDAEVISELRATGMWILVTTHREDLIKGAKGETVRVEKLSQDDAEAVLRRASGIPAGMHLPEAARDLSELCGYVAMDVAFVGRWNTVCGRGDRLAWSDAAASIRMELDAQNYDDAVTTTGGGAPRMKLRAAVLRAGFDELS--AEGYLVQWLYMALAVMPDAHAFSVMDAAALLYDSECEIDDLEPIKSVVDTLERWSILRADGSPSAVLDMTQGWWRTHKYRMHAAHCMFARENLVDRVDVLGPAVRRWVRHISSPEAVHEISPIVL 2491
S + K + VPKGTPAR+ W+V R + V+ V EG+ DG G R+VGLVG SGSG TT ASE VR + V+E F DGI WL+V +GAK RL LM LA +V+E +G G+ P + S C AAYI++ + KG G +CL+VAD+VW+ EV+S+L TGMW+L++T L+ A GE V V++LS+ DA +VLRRA+ +P +P A DL ELCG VAMD+AFVGRW+TV GR DR+AWSDA + +R E+ DA R R A+LRAGF++L+ ++ VQ LY++LAV PD HAF+V DAA LLYD E +D + VVDTLERW++LR++ QG YRMH AH +FARE L+D V PAV+RWV IS E + P VL
Sbjct: 27 SKTQAKLTKVPKGTPARKSWYVKR----RHVMDTVFEGLAS-DG----------GPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRPTS-SDDC-----AAYIRQRMK-------KGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKVGSGDASEKLA--ETRDARRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDREPCAEDEASVAVVVDTLERWTVLRSE----------QG-----AYRMHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRSSDPYVL 420
BLAST of mRNA_H-paniculata_contig1852.4564.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE) HSP 1 Score: 319 bits (818), Expect = 9.430e-92 Identity = 216/564 (38.30%), Postives = 311/564 (55.14%), Query Frame = 2
Query: 815 NRNELVALRDRCSYLTACVIVKCRGSS-NNVDVSPLVDRVNEVEDLVRRCCGRGRVGMAMRASVDKRDVAELHDRLNELTLSMGLTGIVAVEERLDDLKELLSMMKEKRPALTDMTPKN---ITTK-SSSVKKRSSVPKGTPARQCWHVTRDCVIKRVVKIVIEGIRGRDGSGGVGVGGHEGRRVVGLVGESGSGTTTAASELVRRSVVRELFPDGIVWLNVGNGAKGRLRCLMHDLASMVHEVVGGGKGKPPPADSFSCEGYSSAAYIKEMVTTTAAVATKGQGHGHRRCLLVADDVWDAEVISELRATGMWILVTTHREDLIKGAKGETVRVEKLSQDDAEAVLRRASGIPAGMHLPEAARDLSELCGYVAMDVAFVGRWNTVCGRGDRLAWSDAAASIRMEL---DAQNYDDAVTTTGGGAPRMKLRAAVLRAGFDELS--AEGYLVQWLYMALAVMPDAHAFSVMDAAALLYDSECEIDDLEPIKSVVDTLERWSILRADGSPSAVLDMTQGWWRTHKYRMHAAHCMFARENLVDRVDVLGPAVRRWVRHISSPEAVHEI 2476
N+ EL L RC +LT CVIVK R SS + +DVSP+ + + +LV RC GRG++ + AS DK +A + + +L ++ L G+ +E + DL+ + M + + A ++ N IT + S + K + +PK TP + WHV R V++RV + + DG G +VGLVG+SGSG TTAASE+VR + + RL LM LA MV+E +GG +P +D + AYIKE + +G G +CL V D+VW+ EV+ EL GMW+L++T E+L+ G +GE V V +LS+ +AE+VLR+A+ +P LP+ A DL ELCG VAMD+AF GR +TV GR DR AWS AA+ +R E+ + + V T R R AV++AGF +L+ ++ VQ LY++LAV+PD F+V DAA L+YD +D VV+ LERWS L ++ + WR Y +H AH FARE L+DR DV PA+ RW R+ISS + + +
Sbjct: 41 NQEELQTLYRRCVFLTTCVIVKSRQSSFSEMDVSPVEECLEAAGELVERCGGRGKMTRVLNASSDKDQIARMKANIRDLEANLSLAGVAILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTA-----DG----------GPPLVGLVGDSGSGKTTAASEIVRSN-------------------EDRLPSLMLQLAHMVYEEIGG--RRPATSDDGT-------AYIKERMH-------RGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKVRTEMSKGECEGVRGTVVET-----RDARRKAVVQAGFGDLAIGSDDERVQRLYLSLAVLPDGRRFTVKDAAVLIYDRMPSAEDEASAAGVVEILERWSAL------CSIRGCYRMAWRGSHYVLHDAHSDFAREKLMDRGDVCRPALVRWTRNISSVDTLRAV 543
BLAST of mRNA_H-paniculata_contig1852.4564.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI) HSP 1 Score: 312 bits (799), Expect = 2.550e-89 Identity = 213/611 (34.86%), Postives = 308/611 (50.41%), Query Frame = 2
Query: 743 ELPSTGEVLVALQSIGHNVESASSNRNELVALRDRCSYLTACVIVKCRG-SSNNVDVSPLVDRVNEVEDLVRRCCGRGRVGMAMRASVDKRDVAELHDRLNELTLSMGLTGIVAVEERLDDLKELLSMMKEKRPALTDMTPKNITTKSSSVKKRSSVPKGTPARQCWHVTRDCVIKRVVKIVIEGIRGRDGSGGVGVGGHEGRRVVGLVGESGSGTTTAASELVRRSV------------------VRELFPDGIVWLNVGNGAKG--RLRCLMHDLASMVHEVVGGGKGKPPPADSFSCEGYSSAAYIKEMVTTTAAVATKGQGHGHRRCLLVADDVWDAEVISELRATGMWILVTTHREDLIKGAKGETVRVEKLSQDDAEAVLRRASGIPAGMHLPEAARDLSELCGYVAMDVAFVGRWNTVCGRGDRLAWSDAAASIRMELDAQNYDDAVTTTGGGAPRMKLRAAVLRAGFDELSAEGYLVQWLYMALAVMPDAHAFSVMDAAALLYDSECEIDDLE----PIKSVVDTLERWSILRADGSPSAVLDMTQGWWRTHKYRMHAAHCMFARENLVDRVDVLGPAVRRWVRHISSPEAVHEISPIVLVEL 2500
E+P G VL L++I E+ SN L AL +RC+Y+TACVIVK R SS+ ++V+PL VN ED + RC RG G +AS D ++ L+ R++ LT +GL GI +++ ++DDLK +L+ ++ +N S V ++VP G P WHV RD V+ V + + G + +VVGLVG SGSG TT A+ +V S VRE F DG+VWL VG G R+ LM LA V E + G P A +A+I + V KG G +RCL+VADDVW+ +++ ELR TGMW+L T+ DL++ +G V V++LS+ +AE +LR A+ + G LP AA + E C +A + FVGRW+TV G D W++A ++I E+ A + + +K R A+LRAGF +L+A+ LY++LAVMPD AF +AA L+D E + VV LE+W+++ G+ +RMH AH FAR L DV A+RRW S + + + +V+L
Sbjct: 79 EVPVVGAVLKTLKAIRLRFEAVQSNTERLKALEERCTYVTACVIVKWRQTSSSEMNVAPLESCVNAAEDFIARCSRRGLCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKAMLA----------EVIAQNTMPASVPV---AAVPNGKPVEHSWHVARDRVVDAVYEHLSCG---------------QTPQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTG----GGSAFISDFVRG------KGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEANAQKSDEDLSGVK-RVAILRAGFLDLAAQNGFNPLLYLSLAVMPDGRAFGAKEAAVFLFDDWAEERASQRRTRQAAKVVANLEQWAVVTMHGN---------------LFRMHDAHSDFARNKLKRSEDVRASALRRWRGFTSRLDTIRSMDYFEMVDL 635
BLAST of mRNA_H-paniculata_contig1852.4564.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE) HSP 1 Score: 280 bits (715), Expect = 1.380e-75 Identity = 203/577 (35.18%), Postives = 279/577 (48.35%), Query Frame = 2
Query: 749 PSTGEVLVALQSIGHNVESASSNRNELVALRDRCSYLTACVIVKCRGS-SNNVDVSPLVDRVNEVEDLVRRCCGRGRVGMAMRASVDKRDVAELHDRLNELTLSMGLTGIVAVEERLDDLKELLSMMKEKRPALTDMTPKNITTKSSSVKKRSSVPKGTPARQCWHVTRDCVIKRVVKIVIEGIRGRDGSGGVGVGGHEGRRVVGLVGESGSGTTTAASELV--RRSVVRELFPDGIVWLNVGN--GAKGRLRCLMHDLASMVHEVVGGGKGKPPPADSFSCEGYSSAAYIKEMVTTTAAVATKGQGHGHRRCLLVADDVWDAEVISELRATGMWILVTTHREDLIKGAKGETVRVEKLSQDDAEAVLRRASGIPAGMHLPEAARDLSELCGYVAMDVAFVGRWNTVCGRG----DRLAWSDAAASIRMELDAQNYDDAVTTTGGGAPRMKLRAAVLRAGFDELSAEGYLVQWLYMALAVMPDAHAFSVMDAAALLYDSECEIDDLEPIKSVVDTLERWSILRADGSPSAVLDMTQGWWRTHKYRMHAAHCMFARENLVDRVDVLGPAVRRWVRHIS 2452
P + AL V++AS N+ EL L +RC +T VI K + S ++ +DV PL + V++++++ R RGR+ + D D+ L R+ ++ MGL+G+V E+LD + L + P VPK P + +HV RD V+ RV KI+ GG G + L G SG+G TT+A+ +V R VR LFPDG+VWL VG G RL LM +LA +HE V G P D +G S Y++++V+ RCL+VADDVW+A V+ +LR TGMW+L+TT ++ G E V ++ L +AE VLR A+ +P G L +A+ + E+CG VAMD AFVG W +V AW + ++D V TG R R AVLRAGF + E L Q LY+ LAV P+ F DAA LL + E K + LERW +LR D S KYR H AH FAR+ L+DR D+ PAV RW HIS
Sbjct: 38 PVVAPLCTALLKAKGVVDAASRNKEELEELHERCEMITIQVIDKAKASKTSTIDVKPLQECVDKLKEVAERYHDRGRLARLAQFRRDGEDIQRLRKRIEDVVPIMGLSGVVNNGEKLDQILARLQPGPKLAP----------------------VPKKAPFTKSFHVVRDGVVDRVCKIL---------------GGDGGPAMAALTGGSGAGKTTSAAAMVGERGDRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVMKGAVDAPTGD----DGVS---YVRKIVSQEKL-----------RCLVVADDVWEASVVQKLRETGMWVLLTTRFPEM--GEPEERVVMDTLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTTNGVPKSNKAWERTVEELTAQIDHVRGQMKVGNTGEDNDRAINRLAVLRAGFKYIGREDPLAQELYVKLAVFPEGFLFGESDAAVLLENEEVA-------KGPISILERWGVLRTDAS--------------EKYRTHDAHADFARKKLMDRNDLREPAVERWTEHIS 536
BLAST of mRNA_H-paniculata_contig1852.4564.1 vs. uniprot
Match: A0A6H5KE50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE50_9PHAE) HSP 1 Score: 273 bits (697), Expect = 3.530e-74 Identity = 204/600 (34.00%), Postives = 302/600 (50.33%), Query Frame = 2
Query: 749 PSTGEVLVALQSIGHNVESASSNRNELVALRDRCSYLTACVIVKCRGSSNN-VDVSPLVDRVNEVEDLVRRCCGRGRVGMAMRASVDKRDVAELHDRLNELTLSMGLTGIVAVEERLDDLKELLSMMKEK-RPALTDMTPKNITTKSSSVKKRSSVPKGTPARQCWHVTRDCVIKRVVKIVIEGIRGRDGSGGVGVGGHEGRRVVGLVGESGSGTTTAASELVR-RSV----------------------VRELFPDGIVWLNVGNG--AKGRLRCLMHDLASMVHEVVGGGKGKPPPADSFSCEGYSSAAYIKEMVTTTAAVATKGQGHGHRRCLLVADDVWDAEVISELRATGMWILVTTHREDLIKGAKGETVRVEKLSQDDAEAVLRRASGIPAGMHLPEAARD-LSELCGYVAMDVAFVGRWNTVCGRGDRLAWSDAAASIRMELDAQNYDDAVTTTGGGAPRMKLRAAVLRAGFDELSAE-GYLVQWLYMALAVMPDAHAFSVMDAAALLYDS---ECEIDDLEPIKSVVDTLERWSILRADGSPSAVLDMTQGWWRTHKYRMHAAHCMFARENLVDRVDVLGPAVRRWVRHIS 2452
P + VAL V+ AS N+ EL L +RC +T VI K + S+ + +DVSPL V++++++ +R +G + + D D+ L R+ + MGL G+V + +RL+D++++L+ ++ + RP L + VP G PA + WH RD V V KI+ G E V L G+SG+G +TAA+++VR R V VR F DG+V+L VG G A RL LM LA +HE V P A G +Y+K+M+T T +RCL+VADDVW+ V+++L+ TGMW+L+TT ++++ +G V V++L+ +AE VLR A+ +P G L + A L ++CG+VAMD+AFVG W+ V D AW++A + I + D G ++K R +LRAGFD L E G L Q LY+A+AV PD +AF V DAA LL D+ + ++ ++ LERW++L + S KYRMH H FAR+ + D+ DV P VRRW IS
Sbjct: 116 PVVAPLCVALLKAKGIVDGASRNKEELGELCERCDLITVQVIDKAKASNTSTIDVSPLQGCVDKLDEVAKRYHDQGCLARLAQFRRDGDDIQRLRARIEAIVPIMGLAGVVNIMDRLEDVRQILARLQPRPRPKL------------------APVPPGLPAGEAWHAVRDHVEDEVYKILS---------------GDE-PAVAALTGKSGAGKSTAAADMVRNRKVDIRGLDDETEDQARTRMDRLERVRARFSDGVVYLRVGKGEGAADRLPDLMRKLAKALHEDVLKKTAGAPEA------GEKGESYVKKMMTRTK-----------KRCLVVADDVWEPPVVAKLKETGMWVLLTTRFPEIVEPNEG--VDVDQLTPAEAEDVLRGAAELPRGQRLCDPAMQVLDDICGFVAMDIAFVGSWSMVRHTDDSGAWAEAVSKINDTIVDVRED----ADGMNDSQVK-RLGILRAGFDYLGEEEGTLAQKLYVAIAVFPDGYAFGVSDAAVLLNDTHPPDPAPHHMKVASRAIEILERWAVLTMNASG--------------KYRMHDTHMDFARDKIRDQGDVRKPVVRRWTSRIS 643 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1852.4564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1852.4564.1 >prot_H-paniculata_contig1852.4564.1 ID=prot_H-paniculata_contig1852.4564.1|Name=mRNA_H-paniculata_contig1852.4564.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=691bp MRRDQDGRMKNKNKNKNAMVISHPRPRVLSLRAPVFGEIAADAIDVASASback to top mRNA from alignment at H-paniculata_contig1852:1534..10776- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1852.4564.1 ID=mRNA_H-paniculata_contig1852.4564.1|Name=mRNA_H-paniculata_contig1852.4564.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9243bp|location=Sequence derived from alignment at H-paniculata_contig1852:1534..10776- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1852:1534..10776- >mRNA_H-paniculata_contig1852.4564.1 ID=mRNA_H-paniculata_contig1852.4564.1|Name=mRNA_H-paniculata_contig1852.4564.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4146bp|location=Sequence derived from alignment at H-paniculata_contig1852:1534..10776- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |