prot_H-paniculata_contig1851.4561.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1851.4561.1
Unique Nameprot_H-paniculata_contig1851.4561.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length837
Homology
BLAST of mRNA_H-paniculata_contig1851.4561.1 vs. uniprot
Match: A0A6H5JK77_9PHAE (VPS9 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK77_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 3.430e-51
Identity = 248/817 (30.35%), Postives = 300/817 (36.72%), Query Frame = 0
Query:  130 GQKRCQEAFVELLSDERTREGRLLQRFLTMTLA-KDP------------------------ASTATSAGGGLS--------------------------SSSECPNEGGRGSATKALG-------------------------GDGPVGPQVVKAFINYFAKEYLTSRFDVPDLLVPALSELVASLVFRQARSLVLGYGRDRVTKNDQLWREKARMVRLSSLAQLGAPPEYIPACRMPSDMFGVPVLEINDRSNKGSTVNIGGFDGVAGAGKRVTLAEAMAMVGSGASESSRDTEYKM---SRSDDECDGCGDSRLAVNAAIAATVQGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGADGGTLRSCGGGNTGVRSTYTYCGAPCDDLLSAERCERESDSGGVGIVGDAIKSSKGSKGGTAADVEPEAAAVVKGLPCIAEKVGDEATAVDSGRKEQHPPHTEGDASSAYSSAKEGSRPSKCADTDSKPLKSPATESSDDEKLDDAPTQSTTTAATSSGMAVTEQSSKSDSRESLDVRSGEQRTEAGEREVDHAAVPAALPKGVTSSIVGKSIVTTAAEATAIPTALGKVKMAVSAYAGASREFGRLGECITPAEMVAVVREGIASLADDAKRISASEKPLDADSLIPLLVYALVRANLPRVHEALNFLRNFRGCSWGGEQAYYVTCIEAAVSFVLNWNPEQESTTVALTVADAIGANRGDTAGDSANKREAAETEGAEEFSREERG-------------------------------GRQALMHLGIFLEHNTVQEDTVGALSSIGWL 836
            G+K C+ AF EL+ DER REGRLL+RFLTM  A K P                        +  AT  GG  +                          SS E  ++  RG A    G                         G+GPVGPQVVKAFINYF+KEYL   FDVPD LVP L+ LVA LVFRQAR LV GY R RV KND++W+EKAR VRL  L++LGAP EYI                I      GS V  G     A  G R      +  V +        T+ K+   SRSDD+  G GDS     A   A +                                                       G+               +A+ C    D   V           G +  T     P A +  KG+     + GD A                                   ADT +               +   P        T++G A                          E+EV  AA     P                                  AYA ASREF RLGEC TP EM+ V++ G+  L+++A RIS S+KPLDADSL+PLLV++L  ANLPRVHEAL+FLRNF+G  WGGEQ YYVTC+EAAVSFVL+W        VA   AD                                                                 GR+AL+ LGIFLE + VQEDTV  LSS GWL
Sbjct:  513 GRKDCEVAFFELMLDERNREGRLLRRFLTMAQANKSPXXXXXXXXXXXXXXXXXXXVPWSFSGDATGTGGKTTTLANTXXXXXXXXXXXXXXXXXXXGGSSVEAGDDKTRGGAANTAGREPGSATAASATVGKTGAITGDSEEGEGPVGPQVVKAFINYFSKEYLVKMFDVPDFLVPTLTTLVALLVFRQARRLVFGYDRRRVAKNDEVWQEKARRVRLVPLSELGAPQEYI----------------IASSPRSGSAVQDG-----ARRGPRTEKEGEVEAVDADL------TDRKVVADSRSDDD-GGPGDSGEPDGAGTDARLA-----------------------------------------------------AGLSPKSAAAAVEASHARTADVCANAGDDTAVA----------GQEQAT-----PAAPSTDKGVSPTGGEHGDAAL----------------------------------ADTSTAXXXXXXXXXXXXXPVSGVP-------QTAAGRA-----------------------RQAEKEV--AAXXXXAP----------------------------------AYARASREFERLGECATPVEMLDVIKAGMTLLSEEAARISGSDKPLDADSLLPLLVHSLAHANLPRVHEALSFLRNFQGAGWGGEQEYYVTCLEAAVSFVLDWGA------VADPNADGDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDKGREALVRLGIFLEKHEVQEDTVDVLSSAGWL 1127          
BLAST of mRNA_H-paniculata_contig1851.4561.1 vs. uniprot
Match: D7FS46_ECTSI (VPS9 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS46_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 1.610e-34
Identity = 91/196 (46.43%), Postives = 110/196 (56.12%), Query Frame = 0
Query:  674 MVAVVREGIASLADDAKRISASEKPLDADSLIPLLVYALVRANLPRVHEALNFLRNFRGCSWGGEQAYYVTCIEAAVSFVLNW----NPEQESTTVALTVADAIGANRGDTAGDSANKREAAETEGAEEFSR-----------------------------EERGGRQALMHLGIFLEHNTVQEDTVGALSSIGWL 836
            M+ VV+ G+  L+++A RIS S+KPLDADSL+PLLV++L  ANLPRVHEALNFLRNF+G  WGGEQ YYVTC+EAAVSFVL W    +P  +                  T G   +K EA    G + F R                             E   GR+AL+ LGIFLE + VQEDTV  LSS GWL
Sbjct:    1 MLDVVKAGMTLLSEEAARISGSDKPLDADSLLPLLVHSLAHANLPRVHEALNFLRNFQGAGWGGEQEYYVTCLEAAVSFVLGWGAAADPNADGDDGNXXXXXXXXXXXDSTKG---SKAEA----GKKLFGRGDGSGXXXXXXXXXXXXXXXXXXXXXXXXEPDKGREALVRLGIFLEKHEVQEDTVDVLSSAGWL 189          
BLAST of mRNA_H-paniculata_contig1851.4561.1 vs. uniprot
Match: D7FS45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS45_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 1.820e-20
Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 0
Query:  197 GDGPVGPQVVKAFINYFAKEYLTSRFDVPDLLVPALSELVASLVFRQARSLVLGYGRDRVTKNDQLWREKA 267
            G+GPVGPQVVKAFINYF+KEYL + FDVPD LVP ++ LVA LVFRQAR LV GY R RV K+D+ WREKA
Sbjct:  656 GEGPVGPQVVKAFINYFSKEYLVNMFDVPDFLVPTMTGLVALLVFRQARRLVFGYDRRRVAKSDEAWREKA 726          
BLAST of mRNA_H-paniculata_contig1851.4561.1 vs. uniprot
Match: A0A7S2GUB1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GUB1_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 5.030e-14
Identity = 66/198 (33.33%), Postives = 92/198 (46.46%), Query Frame = 0
Query:  662 FGRLGECITPAEMVAVVREGIASLADDAKRISASEKPLDADSLIPLLVYALVRANLPRVHEALNFLRNFRGCSWGGEQAYYVTCIEAAVSFVLNWNPEQES-----TTVALTVADA--IGANRGDT----AGDSANKREAA------------ETEGAEEFSREERGGRQALMHLGIFLEHNTVQEDTVGALSSIGWL 836
              ++  C+ P EM+  +   +  L  +A  I A +KPLDAD + P+LV A+V + LP +H  + FLRNF      GE AY++TC EAAVSFV+  +   +      TT A TV     I +N  D       D  + R  A             TEG +       G   A+M LG +L      EDT+  L   GW+
Sbjct:  102 LSKMSICVVPLEMLHWLMAAMRMLHREATLI-AGDKPLDADVMFPILVLAIVHSKLPHMHSYIFFLRNFAIADTTGEAAYFLTCCEAAVSFVMKMDVPSDQRDLSRTTTATTVGQRGRIESNDSDDPEVGVSDEQSVRRTAMYSRESVSSSDERTEGLDGKDWSNEGEAAAMMQLGHWLGAQQAMEDTIDVLEQEGWM 298          
BLAST of mRNA_H-paniculata_contig1851.4561.1 vs. uniprot
Match: A0A6U0URX0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0URX0_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 7.620e-12
Identity = 56/178 (31.46%), Postives = 88/178 (49.44%), Query Frame = 0
Query:  659 SREFGRLGECITPAEMVAVVREGIASLADDAKRISASEKPLDADSLIPLLVYALVRANLPRVHEALNFLRNFRGCSWGGEQAYYVTCIEAAVSFVLNWNPEQESTTVALTVADAIGANRGDTAGDSANKREAAETEGAEEFSREERGGRQALMHLGIFLEHNTVQEDTVGALSSIGWL 836
            SR    L  C+TP++M  V+   +  L  +A  IS     L AD+L PL+++A++ A +P +H  L+F   F      GE AYY TC+ A V +V+      E  ++A   AD      G+    +  + EAA  +  +E++ E    +QA+  LG +L      EDT+  L   GW+
Sbjct:  302 SRYLSNLCACVTPSDMERVLLRAMRLLHGEAVLISGRRTALSADTLFPLILFAVINAEIPPMHSVLHFWNTFSRGDGRGEGAYYRTCVGAVVDYVM-----AEGRSLASQSAD------GEEDSTATERDEAAADDDMDEWTPE--AEKQAMQTLGEWLGAQKAMEDTIETLQQDGWM 466          
BLAST of mRNA_H-paniculata_contig1851.4561.1 vs. uniprot
Match: A0A4D9CSK0_9STRA (VPS9 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSK0_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 4.420e-9
Identity = 62/180 (34.44%), Postives = 87/180 (48.33%), Query Frame = 0
Query:  133 RCQEAFVELLSDERTREGRLLQRFLTMTLAKDPASTATSAGGGLSSSSECPNEGGRGSATKALGGDGPVG------------------PQVVKAFINYFAKEYLTSRFDVPDLLVPALSELVASLVFRQARSLVLGY--GRDRVTKN-DQLWREKARMVRLSSLAQLGAPPEYIPACRMP 291
            R + AF  LL D+R REGRLL R+LT  L ++ AS +  +   ++S +    +GG   A  ALG   P                    P+ + AFINYF  + L   + +P  L PAL  L+ +LVFR+AR    GY  G D+V    ++ WRE+ +         LG PP Y+  C  P
Sbjct:  324 RVEAAFAFLLEDQRYREGRLLDRWLT--LLEESASQSNVS---VASRTRGEGQGGLPGAVSALGRSLPTTTTAVSNGSGSPRDTYLCTPRCIVAFINYFVHDRLLVPYALPPALRPALLGLMQALVFRRARRASSGYVKGGDQVFPELNKQWREQVQAALRLDATALGVPPPYLWGCPFP 498          
BLAST of mRNA_H-paniculata_contig1851.4561.1 vs. uniprot
Match: A0A7S1XT30_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XT30_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 4.190e-5
Identity = 48/171 (28.07%), Postives = 76/171 (44.44%), Query Frame = 0
Query:  134 CQEAFVELLSDERTREGRLLQRFLTMT---------LAKDPASTATSAGGG-LSSSSECPNEGGRGSATKALGGDGPVG---------PQVVKAFINYFAKEYLTSRFDVPDLLVPALSELVASLVFRQARSLVLGYGRDRVTKNDQLWREKARMVRLSSLAQLGAPPEYI 285
            C++AF+ L++DERTREGRLL+R+  +          +   P S ++S+  G +    E     G      +     P G         P+ + +F  Y+ K  +   +++P     AL  L  +LVFR A  L  GY R+     D  W  +   +R    AQ+G P  Y+
Sbjct:  124 CEDAFLALVADERTREGRLLRRYSDLCRRCVGAREEIPGRPRSYSSSSNAGEVLYDEEGMQRHGDARTPGSTAASDPYGEEDDVPVLPPRAIPSFAGYWGKLVIGVLYEIPQEYSDALHALATALVFRSAWPLAFGYRRNANETADAEWACRLDALRRLEPAQIGVPAAYL 294          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1851.4561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JK77_9PHAE3.430e-5130.35VPS9 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FS46_ECTSI1.610e-3446.43VPS9 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FS45_ECTSI1.820e-2073.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2GUB1_9STRA5.030e-1433.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6U0URX0_9STRA7.620e-1231.46Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9CSK0_9STRA4.420e-934.44VPS9 domain-containing protein n=2 Tax=Monodopsida... [more]
A0A7S1XT30_9STRA4.190e-528.07Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037191VPS9 domain superfamilyGENE3D1.20.1050.80coord: 634..770
e-value: 7.3E-15
score: 56.9
IPR037191VPS9 domain superfamilySUPERFAMILY109993VPS9 domaincoord: 657..762
IPR003123VPS9 domainPFAMPF02204VPS9coord: 658..755
e-value: 6.2E-12
score: 45.7
IPR003123VPS9 domainPROSITEPS51205VPS9coord: 626..762
score: 20.52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1851contigH-paniculata_contig1851:1044..8333 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1851.4561.1mRNA_H-paniculata_contig1851.4561.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1851 266..9301 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1851.4561.1 ID=prot_H-paniculata_contig1851.4561.1|Name=mRNA_H-paniculata_contig1851.4561.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=837bp
MEIVSPSSAGGAGGEEMAGFGGVATSTATNATNTTQAEDSVPLSLRCARV
SASPERRPSDASVEERPSPGGVGGNGNSGGGGCGGPVEKDAVVRSSSVVT
ARQGSCGVARGDESAGGGCKMDEMETWKEGQKRCQEAFVELLSDERTREG
RLLQRFLTMTLAKDPASTATSAGGGLSSSSECPNEGGRGSATKALGGDGP
VGPQVVKAFINYFAKEYLTSRFDVPDLLVPALSELVASLVFRQARSLVLG
YGRDRVTKNDQLWREKARMVRLSSLAQLGAPPEYIPACRMPSDMFGVPVL
EINDRSNKGSTVNIGGFDGVAGAGKRVTLAEAMAMVGSGASESSRDTEYK
MSRSDDECDGCGDSRLAVNAAIAATVQGDGDSDATAAAVVVVADGDDRDN
STAIGRADAGGGGSGRGADGGTLRSCGGGNTGVRSTYTYCGAPCDDLLSA
ERCERESDSGGVGIVGDAIKSSKGSKGGTAADVEPEAAAVVKGLPCIAEK
VGDEATAVDSGRKEQHPPHTEGDASSAYSSAKEGSRPSKCADTDSKPLKS
PATESSDDEKLDDAPTQSTTTAATSSGMAVTEQSSKSDSRESLDVRSGEQ
RTEAGEREVDHAAVPAALPKGVTSSIVGKSIVTTAAEATAIPTALGKVKM
AVSAYAGASREFGRLGECITPAEMVAVVREGIASLADDAKRISASEKPLD
ADSLIPLLVYALVRANLPRVHEALNFLRNFRGCSWGGEQAYYVTCIEAAV
SFVLNWNPEQESTTVALTVADAIGANRGDTAGDSANKREAAETEGAEEFS
REERGGRQALMHLGIFLEHNTVQEDTVGALSSIGWL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037191VPS9_dom_sf
IPR003123VPS9