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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 1035 |
| Cds size | 1035 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18504.4560.1 >prot_H-paniculata_contig18504.4560.1 ID=prot_H-paniculata_contig18504.4560.1|Name=mRNA_H-paniculata_contig18504.4560.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=345bp
MADHSSRPQDPQVTCARGVASRMGRHKSSSGGHRHKSHRRKNEKKHRSSS
PVSHDGSSGSESSASSNSGSAAAGRPAGRKNEDQLKAENRNAILKRSRMW
QTVGSDDDDEEEKKNGSFLGEGGGQKRGPWARKDGGGGKNSKDVVSIEDD
DGAHHRHHNHHRSSGAHHQGQHHHHRSGDRSEDCPGHHSKDRSRHHSKDR
SRRHSKDRSTERSKDCTVARGRKRSLDGGESRSDADSDSSDSESSSSSDD
DGDDSDDASSCSSSSSDDDDDASSGEDKKQSRREGGKKRKKKASSSSSSR
HHSTHGSSSRSSSKRKHHKSRRNGVDSSSKDIGEKERKHHKKVS* back to topmRNA from alignment at H-paniculata_contig18504:188..4769+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig18504.4560.1 ID=mRNA_H-paniculata_contig18504.4560.1|Name=mRNA_H-paniculata_contig18504.4560.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4582bp|location=Sequence derived from alignment at H-paniculata_contig18504:188..4769+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTGACCACTCCAGCCGTCCCCAAGACCCACAGGTAACGTGTGCTCG
TGGTGTTGCATCTAGGATGGGTCGCCACAAAAGCAGCAGCGGTGGACATC
GCCATAAGAGCCATCGCCGCAAGAATGAGAAGAAGCATCGAAGTTCTAGT
CCAGTGAGGTGTGCTTTCACTTGCCAAAACCCCTATCGCCTCTGATGGAT
GCCCCAACACGTTTGCCTCACGTATATTCGAAAAAGACATTTCAGATTTT
GGTTTGCGAAGTCCCTAGACACGAACTTTCCGTATCCGCCGTTGCTGTCC
TGGGCAGACTAAAAGTATCATACATATGCTGCATCACTACGTCACTTAGT
TTCTGCTGTTGGTGTTGATCTAGATGTTACTGCGTGTATCGGTGGCGGGC
GATGAAACACGCATCATTTGACCATGTTGCTCACTTTGGGTCATTCGGAA
CAGAAGTAAACCATACATTTATTATGGAAAGAGGGTGTGGAATTCTCAAA
GCGCGTGCTCGCCAAGGCCCAACAAATGGACCCTTGCGTGCCGTAGTTAC
ATCTATGTATCTTTTTACGGCGCTCATACAAAGGACAGCTGTAACAGAGC
CATGGGCGGTGTGTGAGGCTTGGTTTTACAGGTGGTGGTACAGAGTGCTA
CCGATTTGAGCGTGTGGGCAAGGGATGACGGTTGACACTGTCCCGTAGAT
ACGACGAATACAAACGCACAGGTACGGGAAATTAGATTGTACAGTCGTTG
AACACCGACATGGAAGACTGCATGAAGTCTCTCAACCGTAAACTCTTCAA
TCGGAGTCTTACAAAAAAAATTGAAAAAACGGTTGAGTTCATTGGCAGTT
ACTGGGAGCAGAAGGGCAAACCCCTCGTATCCATTCCCTTTTCCTTTTCA
TTGTCTATCTGTCTGAAAACAGTCACGATGGTTCTTCGGGTTCGGAGAGC
AGTGCCAGCAGCAACTCAGGGTCTGCGGCAGCCGGCCGACCAGCAGGAAG
GAAGAACGAAGATCAGCTGAAGGCCGAGAACAGGTGATCAGTGGTATCTA
CGGTCGCTGAAACCTATCGTCAGAGGAAGTCGATCCTAGGTTATTAAGCC
TTCTAGCGTCGAAATCTGCTTCGCAACCAAAGACATTTTGATAACTAGAT
GTCGGGCGCTGCAGTCCTTGTGTGCAAAACTATATCAACTACAATATTTA
TCCCTGCTTTGTGTACCGTTTGTACTGGACTGTCTGCCCGAACAGCGGCG
GTTCCCTATTCGCTGTAGTCTTGTCATATTCCATTTTCCCGCATCTGAGC
CAGAGATTAGATCAGAACGGCACTAAACTGGTGACATGCTTGTAACGGAC
CGATCTCGTGAGTTACGCAGAAACCAAGGTATTTGTCTAGATGTGCGTGC
GTACAAAATGCCACTTATCCTTAACAATTTGTAGAGTTCGGCAGAGGCGC
GCGACACATCTCGCAACACTAGTGTCACTGGCAATCTGCTCGTGCTGGCT
TAAGCAATCTTCCAGATTGCAGTATATCGAGATCTGCGCACGTGACAAAA
AAAAATGCCTCATCATACGACATAAAGGCTCCATTGGCCTCTCCGGTTCC
CTAGACTCGCTACCCCCGTGCGCGGGCCGCATCGATATTCGCGATGAGCT
CGGCACGAAGCTCGAAAACTCGTTGAATGCCTGAAGGCAGCTAATGATAG
AATGCGATTTGAACATGATGGTATAGCTGAGCGTTTACGTTTTCCTCCTC
CGAGGTGTGGTGTTTTCACGTTAATAACCCGCTTTTCGCCCCCCACGCCC
GGGGACGCGTGGACAACTACGGCAAGCAAAACATTATAATGTCTATCCCC
CCGACCCAAACACTGCCCGCCACACACCGTCGAACCCCCCCAACAATTCC
CGCAAAAATCTCACATCCCCAATCCCTCTTCCTCGCTACCTCCTTACCGA
CCTCCTGCTCGCGTGGGTGTGATGTAAACCCTGTTTCCTTTTTTCTCTCT
CTGATTTTTTTGCAACCACTTGGACAAATACTAATCAGAAATGCCATCCT
GAAAAGATCGAGAATGTGGCAGACAGTAGGTTCCGATGACGACGATGAAG
AAGAAAAAAAAAATGGATCTTTTTTGGGAGAAGGAGGAGGTCAGAAACGT
GGACCGTGGGCGAGAAAGGACGGTGGTGGGGGAAAAAACAGCAAGGACGT
TGTGAGCATTGAAGACGATGACGGCGCCCATCACCGCCACCACAATCACC
ATCGCAGTAGTGGCGCTCACCATCAAGGGCAGCACCATCATCATCGTTCC
GGGGATCGCTCTGAGGATTGTCCTGGGCATCACTCTAAGGATCGGTCGAG
GCATCATTCCAAGGACCGGTCTAGGCGTCACTCCAAGGATCGTTCTACAG
AACGCTCCAAAGATTGTACAGTGGCGCGCGGACGGAAGCGTAGCCTGGAT
GGTGGGGAGAGCAGGAGCGATGCCGACAGCGACAGTAGGTGCGTTTTGTA
GTTTGTTATTATAGAGTAGCTCTATGGTGGTTAGGTGGAGAGATCGATGG
GTCATTTGTGGGTGTGTCGCAACACGTTTACTGCCAGCATTCGTGCTTGG
GGCACCGCTACACGAGTGCGATCAGATTTTTCGCCGCACCCTTATTTGTA
ATTCATCACCTAGAGTGATTGACTCGTTGTGCTTGCAGTATTTTACGGCG
ACCGTCAAGAGCTTGAGTACACCCATACTTATGATCCATGCTCAACGGCG
CGCGCTGCTCTCGCATGTATGCATTATGTATGATTTTTTCACCCAATCCG
AATATATATATATATAATATATCTTCCCATGTGAGCCTCGGTCTCCCTAT
ACCAGACAACTACCGAAATGAATGTCCGTCACAGTGTGTTCGGCGTAACA
TGAACACTCTAGTGTTGGTTAAGTTTGCAACCCATTCTTAGGTCTGCCGA
TAAGTCGGGCGTTAACTCTCGTGGTGTGATCACTTACATTTTCGGAAACG
TGAAGGTATTTTGAGCCGAAGTATTTGAATTGGCTAAGGATTATGAGACC
TCAGATGGCACCTGCGTATTCACGAGCGTACTCTTTCCCGCGAAACAAAC
CGAGAGTTCGTGTATGATACACGTTTTGATATCGATCTGTCAGCGGTTAC
GATAACAAGTAGTTCGCCAGTAGACTTTGCAAATAACGTTATGCAATCAT
ATCTCGCGGTTGATGTTTTTTTTTAAACAGCTGGGTACGTTCAAGTTCAC
CGGTATTTCTGGGTATTCACAGTCACAAAGACGGTATAAAAACAGGTTAT
GACTCGGCAGCTCCACTTGATCTCTACCTTGCCTTTTAAAAGCCCCGCAG
TCCGTCTACAAATCGCACACTGATGTACTACTTCGAGATGTGATGTCCAT
GGCTTTATTGACTGCTGCAGCCGGTACACTGATGCTAATGGTGTTCAGGC
ATATCAAGAACAAATGTGTTTGATTCCTGTAGATACTACGCGCACGACCC
GTCAGCCGATGACTGTAGCATGAACGATTGAAGAATTGTACGCACCGTCC
TCAAACATTCCTGTGTCGCCATCACTACAACACGAGCTGACCGTATCCAG
CATCCTGGATCTCAAAAGCAATATACTGTGAACCTGCACGGCACAAATAC
GATCGACGTTGCCCCAAGTGCAACGGCACATGTCACCAATGGTGTTGTCC
TCTGTCAATTTATCTTGCGATCAAAATCAAATGTGCACATCAATATAGCC
CCATATCCCAAGTACGATAGCCTCACATGGCTTCTGAGGCCCGCAGCCGT
CGGGAAAATGACAGCTTGGGCGCTGCGCTGCAGCTCTCCCACCTCAGACC
GTGCCGGTTTTTGTGCGATCTACTAGATGTAACTTTAACCTTCCCACTGC
ATATTGCCATACAGCAATTATATCTTAGCTTTCTCTCGGCTTTGTATCGA
TACAGAGCAATGCTGTGATAAATCAAGGTACATGCAGTGTTTCGAAAGCG
CTAGTCACCTTGACTTTCTTTAGGGTTGGGTGACGAAGCCTGGCGTGTGT
ACAGATTGTGATTTTTCCTCAATGGTTAATAATGTTGATGATGGGAAGCA
TCGAGAAAGGTCACAAACCAAGTAATTCGCCCCCCCTTGCTGTGTGTGTG
TGTGTGTGTGTGTGTGTTTTTCTCCTTTAAGACGTCTTTTTTTCCAGTTG
TCGTCATTTTCAGATTGTCTTTTCTCATCTCTGTCCTGTCCCCTGTTCCT
TTGCTACTTGCTTCAGCGATAGCGAAAGCAGCTCGAGCAGTGATGATGAT
GGTGATGACAGCGATGACGCCAGCAGCTGCAGCAGTAGCAGCAGTGACGA
CGACGACGACGCCAGCTCAGGAGAAGACAAGAAGCAAAGTAGGCGGGAGG
GCGGAAAGAAGAGGAAGAAGAAAGCCTCATCGTCATCATCATCTCGCCAC
CACTCGACCCACGGCAGCAGCAGCCGAAGCAGCAGCAAGCGCAAACACCA
CAAGAGTCGCCGAAACGGCGTGGATTCGAGCTCCAAGGACATCGGCGAGA
AGGAACGCAAGCACCATAAGAAGGTTAGCTAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig18504:188..4769+ >mRNA_H-paniculata_contig18504.4560.1 ID=mRNA_H-paniculata_contig18504.4560.1|Name=mRNA_H-paniculata_contig18504.4560.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2070bp|location=Sequence derived from alignment at H-paniculata_contig18504:188..4769+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTGACCACTCCAGCCGTCCCCAAGACCCACAGGTAACGTGTGCTCG
TGGTGTTGCATCTAGGATGGGTCGCCACAAAAGCAGCAGCGGTGGACATC
GCCATAAGAGCCATCGCCGCAAGAATGAGAAGAAGCATCGAAGTTCTAGT
CCAGTGAGATGGCTGACCACTCCAGCCGTCCCCAAGACCCACAGGTAACG
TGTGCTCGTGGTGTTGCATCTAGGATGGGTCGCCACAAAAGCAGCAGCGG
TGGACATCGCCATAAGAGCCATCGCCGCAAGAATGAGAAGAAGCATCGAA
GTTCTAGTCCAGTGAGTCACGATGGTTCTTCGGGTTCGGAGAGCAGTGCC
AGCAGCAACTCAGGGTCTGCGGCAGCCGGCCGACCAGCAGGAAGGAAGAA
CGAAGATCAGCTGAAGGCCGAGAACAGTCACGATGGTTCTTCGGGTTCGG
AGAGCAGTGCCAGCAGCAACTCAGGGTCTGCGGCAGCCGGCCGACCAGCA
GGAAGGAAGAACGAAGATCAGCTGAAGGCCGAGAACAGAAATGCCATCCT
GAAAAGATCGAGAATGTGGCAGACAGTAGGTTCCGATGACGACGATGAAG
AAGAAAAAAAAAATGGATCTTTTTTGGGAGAAGGAGGAGGTCAGAAACGT
GGACCGTGGGCGAGAAAGGACGGTGGTGGGGGAAAAAACAGCAAGGACGT
TGTGAGCATTGAAGACGATGACGGCGCCCATCACCGCCACCACAATCACC
ATCGCAGTAGTGGCGCTCACCATCAAGGGCAGCACCATCATCATCGTTCC
GGGGATCGCTCTGAGGATTGTCCTGGGCATCACTCTAAGGATCGGTCGAG
GCATCATTCCAAGGACCGGTCTAGGCGTCACTCCAAGGATCGTTCTACAG
AACGCTCCAAAGATTGTACAGTGGCGCGCGGACGGAAGCGTAGCCTGGAT
GGTGGGGAGAGCAGGAGCGATGCCGACAGCGACAGTAGAAATGCCATCCT
GAAAAGATCGAGAATGTGGCAGACAGTAGGTTCCGATGACGACGATGAAG
AAGAAAAAAAAAATGGATCTTTTTTGGGAGAAGGAGGAGGTCAGAAACGT
GGACCGTGGGCGAGAAAGGACGGTGGTGGGGGAAAAAACAGCAAGGACGT
TGTGAGCATTGAAGACGATGACGGCGCCCATCACCGCCACCACAATCACC
ATCGCAGTAGTGGCGCTCACCATCAAGGGCAGCACCATCATCATCGTTCC
GGGGATCGCTCTGAGGATTGTCCTGGGCATCACTCTAAGGATCGGTCGAG
GCATCATTCCAAGGACCGGTCTAGGCGTCACTCCAAGGATCGTTCTACAG
AACGCTCCAAAGATTGTACAGTGGCGCGCGGACGGAAGCGTAGCCTGGAT
GGTGGGGAGAGCAGGAGCGATGCCGACAGCGACAGTAGCGATAGCGAAAG
CAGCTCGAGCAGTGATGATGATGGTGATGACAGCGATGACGCCAGCAGCT
GCAGCAGTAGCAGCAGTGACGACGACGACGACGCCAGCTCAGGAGAAGAC
AAGAAGCAAAGTAGGCGGGAGGGCGGAAAGAAGAGGAAGAAGAAAGCCTC
ATCGTCATCATCATCTCGCCACCACTCGACCCACGGCAGCAGCAGCCGAA
GCAGCAGCAAGCGCAAACACCACAAGAGTCGCCGAAACGGCGTGGATTCG
AGCTCCAAGGACATCGGCGAGAAGGAACGCAAGCACCATAAGAAGGTTAG
CTAACGATAGCGAAAGCAGCTCGAGCAGTGATGATGATGGTGATGACAGC
GATGACGCCAGCAGCTGCAGCAGTAGCAGCAGTGACGACGACGACGACGC
CAGCTCAGGAGAAGACAAGAAGCAAAGTAGGCGGGAGGGCGGAAAGAAGA
GGAAGAAGAAAGCCTCATCGTCATCATCATCTCGCCACCACTCGACCCAC
GGCAGCAGCAGCCGAAGCAGCAGCAAGCGCAAACACCACAAGAGTCGCCG
AAACGGCGTGGATTCGAGCTCCAAGGACATCGGCGAGAAGGAACGCAAGC
ACCATAAGAAGGTTAGCTAA back to top
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