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Homology
BLAST of mRNA_H-paniculata_contig1850.4559.1 vs. uniprot
Match: A0A6H5KI29_9PHAE (RanBD1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI29_9PHAE) HSP 1 Score: 285 bits (728), Expect = 1.710e-86 Identity = 152/200 (76.00%), Postives = 163/200 (81.50%), Query Frame = 3
Query: 327 STAQFEPVVQLEEVEVKTHEEDERVLWKMRGKLFIFGETLLNKGTGEKEWVERGIGEIKFLQHIENQMVRVLMRQEKTMKVICNHVTDPRIVLKPNAGSDRSWVWNAFDYAEGQLEETTFALRCGNSDSANEFKEQFTSAQKTVESIVAGEVEEPAAAAE---PGVQSPAVEDTPEVDAASASLADLKVGAEESTSPPKE 917
STAQFEPVVQLEEVEVKTHEEDE VLWKMR KLFIFGETLLNKGTG+KEWVERGIGE+KFLQH N+ VRVLMRQEKTMKVICNHV DPRIVLKPNAGSDRSWVWNAFD+ EGQLEE TFALR GNSDSANEFKEQFT+AQK VE ++AGE EPAA AE P A D P DAA+ +L +L VG + P E
Sbjct: 49 STAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNRFVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEMTFALRFGNSDSANEFKEQFTAAQKVVEGLMAGEAPEPAAEAEETAPATXXXAAAD-PSTDAAADALQNLSVGTGAEEAAPAE 247
BLAST of mRNA_H-paniculata_contig1850.4559.1 vs. uniprot
Match: A0A7S2XZR9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZR9_9STRA) HSP 1 Score: 224 bits (572), Expect = 1.030e-63 Identity = 112/165 (67.88%), Postives = 136/165 (82.42%), Query Frame = 3
Query: 324 ESTAQFEPVVQLEEVEVKTHEEDERVLWKMRGKLFIFGETLLNKGTGEKEWVERGIGEIKFLQHIENQMVRVLMRQEKTMKVICNHVTDPRIVLKPNAGSDRSWVWNAFDYAEGQLEETTFALRCGNSDSANEFKEQFTSAQKTVESIVAGE----VEEPAAAAE 806
ESTA FEPVVQL+E+EVKTHEE+E VLWK RGKLF+FGETLLNKGTG+K W ERGIGE KFL+H E+Q +R LMRQE+TMKVICNHV DPRI ++ NAGSDRSWVW+AFD+++G+L ET FA+R NSD A +FK+QF + Q T+ S+++GE E AAAAE
Sbjct: 68 ESTAHFEPVVQLDEIEVKTHEEEEEVLWKWRGKLFVFGETLLNKGTGQKTWNERGIGEFKFLKHKEHQKIRALMRQERTMKVICNHVVDPRIQMQMNAGSDRSWVWSAFDFSDGELVETVFAIRFANSDIAQDFKKQFDTHQATMASLMSGEDAPGASEDAAAAE 232
BLAST of mRNA_H-paniculata_contig1850.4559.1 vs. uniprot
Match: A0A835YXP9_9STRA (RanBP1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXP9_9STRA) HSP 1 Score: 220 bits (561), Expect = 9.560e-63 Identity = 105/154 (68.18%), Postives = 129/154 (83.77%), Query Frame = 3
Query: 318 EEESTAQFEPVVQLEEVEVKTHEEDERVLWKMRGKLFIFGETLLNKGTGEKEWVERGIGEIKFLQHIENQMVRVLMRQEKTMKVICNHVTDPRIVLKPNAGSDRSWVWNAFDYAEGQLEETTFALRCGNSDSANEFKEQFTSAQKTVESIVAGE 779
E E T FEPVVQL+EVEVKTHEEDE+VL+KMR KLF+FGETLLNKG+G K W ERG+GE+KFL+H E++ +R+LMRQEKTMK+I NHV DPRIVLKPN GSDRSWVW A+D+ + +L ET FA+R G+SD+ANEFKE+F +K + I+AGE
Sbjct: 42 EAECTTVFEPVVQLDEVEVKTHEEDEQVLYKMRAKLFVFGETLLNKGSGTKTWNERGVGEVKFLKHREHEKIRLLMRQEKTMKIIANHVADPRIVLKPNLGSDRSWVWTAYDFVDNELVETVFAIRFGSSDAANEFKEKFEEVKKDMARIIAGE 195
BLAST of mRNA_H-paniculata_contig1850.4559.1 vs. uniprot
Match: A0A6S8ZTG3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZTG3_9STRA) HSP 1 Score: 212 bits (539), Expect = 6.990e-60 Identity = 105/156 (67.31%), Postives = 129/156 (82.69%), Query Frame = 3
Query: 312 VPEEESTAQFEPVVQLEEVEVKTHEEDERVLWKMRGKLFIFGETLLNKGTGEKEWVERGIGEIKFLQHIENQMVRVLMRQEKTMKVICNHVTDPRIVLKPNAGSDRSWVWNAFDYAEGQLEETTFALRCGNSDSANEFKEQFTSAQKTVESIVAGE 779
V EEESTA F+PVV+LEEVEVK+ EEDE V++ MR KLF+FGETLL+KGTG K W ERGIGE + L+H E+Q +R LMRQEKTMKVI NH DPRI L+PNAGSDRSWVW+AFD+++G+LEET FALR +S+ AN+FK +F QK +E+I+AGE
Sbjct: 24 VKEEESTATFKPVVELEEVEVKSGEEDEEVVFSMRAKLFLFGETLLDKGTGNKSWRERGIGEARILRHREHQRLRFLMRQEKTMKVIANHAVDPRIKLEPNAGSDRSWVWSAFDFSDGELEETVFALRFADSEIANDFKTKFLECQKEMEAILAGE 179
BLAST of mRNA_H-paniculata_contig1850.4559.1 vs. uniprot
Match: A0A7S2EXM6_TRICV (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S2EXM6_TRICV) HSP 1 Score: 209 bits (533), Expect = 4.470e-59 Identity = 104/154 (67.53%), Postives = 129/154 (83.77%), Query Frame = 3
Query: 318 EEESTAQFEPVVQLEEVEVKTHEEDERVLWKMRGKLFIFGETLLNKGTGEKEWVERGIGEIKFLQHIENQMVRVLMRQEKTMKVICNHVTDPRIVLKPNAGSDRSWVWNAFDYAEGQLEETTFALRCGNSDSANEFKEQFTSAQKTVESIVAGE 779
EEESTA FEPVV+L+EVEV++ EEDE V++ +R KLFI+GETLL+KGTG+K W ERGIGE K L+H E+Q +R+LMRQEKTMKVI NH DPRI L+PNAGSDRSWVW+AFD+AEG+L ET FALR +SD AN+FK +FT +Q +E ++AGE
Sbjct: 22 EEESTATFEPVVKLDEVEVQSGEEDEEVVFGVRSKLFIYGETLLDKGTGKKTWRERGIGEAKILRHREHQRLRILMRQEKTMKVIANHAIDPRIKLEPNAGSDRSWVWSAFDFAEGELVETVFALRFADSDIANDFKTKFTESQSEMEKLLAGE 175
BLAST of mRNA_H-paniculata_contig1850.4559.1 vs. uniprot
Match: A0A8J2T1Z3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1Z3_9STRA) HSP 1 Score: 212 bits (539), Expect = 5.240e-59 Identity = 101/152 (66.45%), Postives = 127/152 (83.55%), Query Frame = 3
Query: 321 EESTAQFEPVVQLEEVEVKTHEEDERVLWKMRGKLFIFGETLLNKGTGEKEWVERGIGEIKFLQHIENQMVRVLMRQEKTMKVICNHVTDPRIVLKPNAGSDRSWVWNAFDYAEGQLEETTFALRCGNSDSANEFKEQFTSAQKTVESIVAG 776
+ESTA+F PVVQL+EVEVKTHEEDE V +K+R KLF F ETLLNKG+G+KEW+ERG+GE+K L+H EN MVRVLMRQEKTMK+ICNHV DPRI L+PN GSDRSWVW+A+D++ G+LE+T FA+R GNSD A E+K F A+ ++++ G
Sbjct: 93 QESTAEFTPVVQLDEVEVKTHEEDEDVDFKIRAKLFRFSETLLNKGSGKKEWIERGVGEVKILKHRENSMVRVLMRQEKTMKIICNHVVDPRIELEPNVGSDRSWVWSAWDFSSGELEDTIFAIRFGNSDGAKEYKAAFEKAKSHMKALKDG 244
BLAST of mRNA_H-paniculata_contig1850.4559.1 vs. uniprot
Match: A0A1Z5JPA6_FISSO (Ran-binding protein 1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPA6_FISSO) HSP 1 Score: 209 bits (531), Expect = 1.000e-58 Identity = 123/226 (54.42%), Postives = 157/226 (69.47%), Query Frame = 3
Query: 240 PKAAAAQGVDGADEASAGADVGAVVPEEESTAQFEPVVQLEEVEVKTHEEDERVLWKMRGKLFIFGETLLNKGTGEKEWVERGIGEIKFLQHIENQMVRVLMRQEKTMKVICNHVTDPRIVLKPNAGSDRSWVWNAFDYAEGQLEETTFALRCGNSDSANEFKEQFTSAQKTVESIVAGEVEEPAAAAEPGVQSPAVEDTPEVDAASASLADLKVGAEESTSPPKE 917
PK A A+G E G DV A EEESTA FEPVV+LEEV+VK+ EE+E VL+ R KLFI+GETLL++GTG K W ERGIGE++ L+H E+Q +R+LMRQEKTMKVI NHV DP+I L+PN GSDRSWVW+AFD+AEG+L+ET FA+R G+SD ANEF+++F Q +E ++ G+ E A GV D A+A+LA L +EE P +E
Sbjct: 7 PKTAPAEG-----EEEEGDDVPA--KEEESTATFEPVVKLEEVDVKSGEEEEEVLYTKRSKLFIYGETLLDQGTGNKTWRERGIGEVRLLKHREHQKIRLLMRQEKTMKVIANHVVDPKIKLEPNVGSDRSWVWSAFDFAEGELKETIFAIRFGDSDIANEFRDKFLECQSEMEKLLGGKDAEDAE----GV----------ADEAAAALAGLST-SEEKEEPKEE 210
BLAST of mRNA_H-paniculata_contig1850.4559.1 vs. uniprot
Match: B7FP98_PHATC (Predicted protein n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FP98_PHATC) HSP 1 Score: 208 bits (529), Expect = 2.560e-58 Identity = 114/202 (56.44%), Postives = 138/202 (68.32%), Query Frame = 3
Query: 312 VPEEESTAQFEPVVQLEEVEVKTHEEDERVLWKMRGKLFIFGETLLNKGTGEKEWVERGIGEIKFLQHIENQMVRVLMRQEKTMKVICNHVTDPRIVLKPNAGSDRSWVWNAFDYAEGQLEETTFALRCGNSDSANEFKEQFTSAQKTVESIVAGEVEEPAAAAEPGVQSPAVEDTPEVDAASASLADLKVGAEESTSPPKE 917
VPEEESTA FE VV+LEEVEVK+ EE+E VL+ R KLFIFGETLL+KGTG K W ERGIG+I+ L+H E+Q +RVLMRQEKTMKVI NH DPR VLKPNAG+DRSWVW+AFD+A G+L ET FA+R G+SD A EFK F Q +++++ GE P + D A+ +LA L EE P E
Sbjct: 29 VPEEESTATFEAVVKLEEVEVKSGEEEEEVLFSQRSKLFIFGETLLDKGTGTKSWRERGIGDIRILRHREHQRIRVLMRQEKTMKVIANHALDPRCVLKPNAGNDRSWVWSAFDFAGGELVETVFAIRFGDSDKALEFKAAFEKYQGEMQALLNGE------------DKPGEDGGKAADEAAEALAGLSTKGEEKAEEPSE 218
BLAST of mRNA_H-paniculata_contig1850.4559.1 vs. uniprot
Match: K0TLK1_THAOC (RanBD1 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLK1_THAOC) HSP 1 Score: 207 bits (528), Expect = 2.660e-58 Identity = 104/158 (65.82%), Postives = 126/158 (79.75%), Query Frame = 3
Query: 306 AVVPEEESTAQFEPVVQLEEVEVKTHEEDERVLWKMRGKLFIFGETLLNKGTGEKEWVERGIGEIKFLQHIENQMVRVLMRQEKTMKVICNHVTDPRIVLKPNAGSDRSWVWNAFDYAEGQLEETTFALRCGNSDSANEFKEQFTSAQKTVESIVAGE 779
A PEEESTA FEPVV+L+EVEVK+ EE+E L R KLFI+GETLL+KGTG+K W ERGIGE + L+H E+Q +R LMRQEKTMKVI NH DPRI L+PNAGSDRSWVW+ +D+AEG+LEE ALR NSD ANEFKE++ QK +E+++AGE
Sbjct: 29 AEAPEEESTATFEPVVKLDEVEVKSGEEEEETLCTYRSKLFIYGETLLDKGTGKKTWKERGIGEARILRHREHQRLRFLMRQEKTMKVIANHALDPRIKLEPNAGSDRSWVWSCYDFAEGELEEKVLALRFANSDLANEFKEKYEECQKEMEALLAGE 186
BLAST of mRNA_H-paniculata_contig1850.4559.1 vs. uniprot
Match: A0A7S0C0M0_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0M0_9STRA) HSP 1 Score: 207 bits (528), Expect = 2.930e-58 Identity = 105/158 (66.46%), Postives = 126/158 (79.75%), Query Frame = 3
Query: 306 AVVPEEESTAQFEPVVQLEEVEVKTHEEDERVLWKMRGKLFIFGETLLNKGTGEKEWVERGIGEIKFLQHIENQMVRVLMRQEKTMKVICNHVTDPRIVLKPNAGSDRSWVWNAFDYAEGQLEETTFALRCGNSDSANEFKEQFTSAQKTVESIVAGE 779
A PEEESTA FEPVV+LEEVE K+ EEDE +L MR KLF++GETLL+KGTG+K W ERGIGEI+ L+H E+Q +RVLMRQEKTMK+I NHV DPRI L+ NAGSDRSWVW+AFD+AEG+L ET FA R +SD A FK +F QK +E ++AGE
Sbjct: 31 ASTPEEESTATFEPVVRLEEVETKSGEEDEEILHGMRCKLFVYGETLLDKGTGKKSWRERGIGEIRLLKHREHQRIRVLMRQEKTMKIIVNHVLDPRIKLEANAGSDRSWVWSAFDFAEGELTETVFAARFADSDIAGTFKAKFEECQKDMEKLLAGE 188
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 211.1 |
| Seed ortholog evalue | 6.1e-52 |
| Seed eggNOG ortholog | 2850.Phatr42712 |
| Preferred name | RANBP1 |
| KEGG ko | ko:K15306,ko:K20282 |
| KEGG Pathway | ko05166,ko05203,map05166,map05203 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000060,GO:0000082,GO:0000166,GO:0000226,GO:0000278,GO:0001101,GO:0001882,GO:0001883,GO:0003674,GO:0005092,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006403,GO:0006405,GO:0006508,GO:0006511,GO:0006606,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007088,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007275,GO:0007346,GO:0007399,GO:0008104,GO:0008150,GO:0008152,GO:0008536,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010564,GO:0010638,GO:0010720,GO:0010975,GO:0010976,GO:0012505,GO:0014070,GO:0015031,GO:0015630,GO:0015833,GO:0015931,GO:0016032,GO:0016043,GO:0017016,GO:0017038,GO:0017076,GO:0019001,GO:0019538,GO:0019899,GO:0019941,GO:0022008,GO:0022402,GO:0023052,GO:0030154,GO:0030163,GO:0030234,GO:0030424,GO:0030695,GO:0031267,GO:0031291,GO:0031344,GO:0031346,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032838,GO:0032886,GO:0033036,GO:0033043,GO:0033267,GO:0033365,GO:0033993,GO:0034504,GO:0034613,GO:0035556,GO:0035639,GO:0036094,GO:0042221,GO:0042886,GO:0042995,GO:0043005,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0045184,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045787,GO:0045840,GO:0045931,GO:0046602,GO:0046604,GO:0046605,GO:0046607,GO:0046677,GO:0046907,GO:0048518,GO:0048522,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050657,GO:0050658,GO:0050767,GO:0050769,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051094,GO:0051128,GO:0051130,GO:0051168,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051236,GO:0051239,GO:0051240,GO:0051493,GO:0051495,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051785,GO:0051960,GO:0051962,GO:0060284,GO:0060589,GO:0065007,GO:0065009,GO:0070507,GO:0070542,GO:0070727,GO:0070887,GO:0071229,GO:0071236,GO:0071310,GO:0071396,GO:0071398,GO:0071407,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072750,GO:0090068,GO:0097159,GO:0097367,GO:0097458,GO:0098772,GO:0099568,GO:0120025,GO:0120035,GO:0120038,GO:0120111,GO:1901265,GO:1901344,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901700,GO:1901701,GO:1903047,GO:1904115,GO:2000026 |
| EggNOG free text desc. | Ran-binding domain |
| EggNOG OGs | 2XC5A@2836,COG5171@1,KOG0864@2759 |
| COG Functional cat. | U |
| Best tax level | Bacillariophyta |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko04131 |
| Exons | 6 |
| Model size | 2566 |
| Cds size | 753 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1850.4559.1 >prot_H-paniculata_contig1850.4559.1 ID=prot_H-paniculata_contig1850.4559.1|Name=mRNA_H-paniculata_contig1850.4559.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=251bp
MSDFAEIAAKAQEETESTPEPTVPKAAAAQGVDGADEASAGADVGAVVPE
EESTAQFEPVVQLEEVEVKTHEEDERVLWKMRGKLFIFGETLLNKGTGEK
EWVERGIGEIKFLQHIENQMVRVLMRQEKTMKVICNHVTDPRIVLKPNAG
SDRSWVWNAFDYAEGQLEETTFALRCGNSDSANEFKEQFTSAQKTVESIV
AGEVEEPAAAAEPGVQSPAVEDTPEVDAASASLADLKVGAEESTSPPKEA
* back to topmRNA from alignment at H-paniculata_contig1850:13293..23311+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1850.4559.1 ID=mRNA_H-paniculata_contig1850.4559.1|Name=mRNA_H-paniculata_contig1850.4559.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10019bp|location=Sequence derived from alignment at H-paniculata_contig1850:13293..23311+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGAATATCGATCTCTTTCTAGAGGAACAAAGGGACAGACACAGAACACC
ACGCCCCGCCCCCCATCTGTTGTATCCCCCCTATCCTCCCACCTACTTCT
CTGTGCAAACGTGGTCTCTTGGGTCAGTCAACGGACTACTTTTCGTCTAG
TTTGTTGAAACAAGAAAACGATGTCTGACTTTGCGGAGATCGCAGCTAAA
GCCCAAGAAGAAACGGAGTCCACACCTGAGCCGACTGTGCCCAAGGCCGC
CGCTGCACAAGGCGTCGATGGTGCAGATGAGGCTTCGGCCGGAGCAGACG
TGGGTGCGGTAGTTCCAGAGGAGGAAAGCACGGCGCAGTTCGAGCCTGTT
GTTCAGCTGGAGGAAGTAGAGGTGAAGACCCACGAGGAAGATGAGAGGGT
GCTATGGAAGATGTGAGTGGTGGGTGGGGTGGATTGTCAGGCTTGGGGTG
GGGTTGGGTGGTGGCAGCGCTATTCAACGCAATGCTGTAATGTGTGGGAT
TTGTTATACGAGGAGGATTGACGTGTACCATGCAATGCCCATCTGTTACG
CTTTGTTAGCAGTTGTTTTTCTGTCTGGTCTGCCGAGGTCGGCTTGTTGC
GTTGTATTGACCGTTGTGTTTGACCTACACGAGAATGATTTTGTGCTGCA
GTGTTCGTTGGTCCAAAGGCAGGGACCCAAACGCAATGTACAAAATGGCA
GGAATTCAAAAACGAAGGACAAATGGATTGATACAGAGGCCCTTTGCAGC
TCCTTGTCGGACCACCCCATCCGCACATGTGGATGGTGTCATCCACGTGG
ATGTTCCAGTCGCCGAATCGTCGAATGTAATCATAAATAATATGGCAACG
CTGGCCACCTCGATTCTGGTGTGCTACATGTGGATGATATCTCAGAGTTT
TAGTGTGTGTGTTGAAGACTAACAATGTATAACATTCTACACTCGCTGCC
GCCCACTTTAGAGTCCTCAAAGTATTACCACCCTCTGGTGTGCTACATGC
CTAAAACACATGATGGCTGCAGTGGTGCATATGTACAAGCCAACGTATGT
ACCTCGCACCTTTGAATATGTTGTCCACAGTATGGCGCAAGGCAGTCAGG
TCACAGTACGTGCTTCCCGTACGTGCATAAATCTAAATGAAAAGAAAAAC
GTCGTCGATGAGCCCTACAGCAGGATGAGCTGTTGTGGTTTGTATGGTCT
TACTGTACGGGAGCAATTTTACAATTTTTGCCGAGTCCTACCACGGCGGG
CAGATGCGAGAAAAGCCAAATTGGATATCCTGATCACACTGGGGGTTAGT
GGGCCTCATCTCACTGTCCAGCCGCTGGCCACGATACTGACTGTAGCACA
ATTGAAATTTGTTTAGAGTTTCGTTTGCTTTGCGTCCCCACGGTCCTCGC
CCGCTCTGTGCAACGAATACGACGCTGTGCCGTGAAATATTGGGCAGGAG
AAAAGATCGCCTTTGAACACCTTGGAAAAGAACCGAAATACTATTTCGGA
ACATAATTTTGTGTAAACAGTACAAGTTGAGTGGTGCAATTATATTGTGC
ACGAGACCATGCCAGTTCCCAAGTTTCGTGGTACATACGCTGGATTGATT
TTTTCAACAGTTGTAGTTCATAATGCCCGTTATCTAGCCATGCCTGAGAG
GTTGGCTTTTCCCGTGTGTTGTCTGGTCGTTGATGTGTAGAGATTCTGTG
GAAATTGACCTGGCGCCGACTCATGAGTTTGCCGAACGATGAATGTCAGA
TATGTGAGGTTTTTTCAATAGAGGAGCTACGAGTACCAAGAGGAAAGCCG
CTAGGAAATGACGGAGAAGTACTTGGCATTTCTTGCCTTGAAATCAGAGA
CGCGTAAGGCCCATCGAGAACTGGAGATTATACGCTTGATTGTAATTTTT
ACACTCGTTGTGACACGGGTTTGAGTAATCTGGCCAATTTGTAAGAAAAT
ATAAACATACGATACTATCAAAAAGATATTTATGGTGAGCACTGTGGATC
CTCAGGGCGGACAATCTCCGAAGAAAGCTATTATGTAGCAATGAGTGGTT
CACCCTCCCGGACTAATACCAGTATTTGACGTATTCGCGATAAAAAAATG
GAAAATATTGTTCTGGATTTCAAAATGATCTGTTTATTATGTGACCTAAA
TCATCCACAACTGCTGATGATACTTGCGAAATTCAATAGATAGGGGTCTT
AACTTCATTCCATTTGTCTGCTTATTCTGAAACTTGGTCGAATGGTTTTG
TACTTCGTTGCGAATCAATGAACTATTCGAATTTTTTTCCGCCATGTGGA
ACAGTAAGTGCACAACTAACAGTGCAACCGAGGTCAGGTATCTGGAGTCT
GGGCCCACTCCGAACCCCCCAGACATGGAATTCTTGAGAAATACGAAATA
TTTTATTCACGAACATTGATCGATTTTTGAAGGTTTTCAAGAATAGACGA
TGAAATTATTCCGAAACTGTATCGATCTGTGAGCATCCTTGGGTGAACAT
ACTCGTGGTGTTCTTATCCGCCCCCTCACCCCTACGTCAAGGGATGAAAC
GTTTCGCTTCTCGCATGCACTCCCTCCAGCAAAGTGCAACGATATTAATG
GTGTGCGGGGTAGTGCCACGCCAATATCGCAACGTCGAACAATTGATTAG
CTGGGAGTAGTGGCAATATGTTGGACTTTGGGTAGGTTGAAACTCCGCCC
CACAGCCGTTTAGAGCGCCACCAAACCGGCTCTGTTACAAAGAAATTGAA
TGGTACCAATATATTTGCGTGGAAATTACCGGAATCCGTTGACTTCACGT
GGCGCGAAATGAATAGCTTGATCGGAAACTGCTTCGTGTCTTTCCCAATT
GAACAATGGGAAAGCTGGAGGGGTGGAATGCGTGAGGCTCAAACTTGACA
GAACCTGGGGCGTACCATCAATTCCTGATGCGTCAATCGGAGGACACTCG
AGAGGAGCGCCCGTGAAATGATGGATATTTTGGATTTGTGTCCAGAGCTC
TATGTTTACAACACGAGACGATCGCAAGGGGTGAGGTCCAAGCCGCCCAA
CATACTACTATGTGAAACAGAGGAAGCGTAATGAGCACAGCACGTCCTTT
CGTTCGACCGGTCCTTGCTGTGCTACTCATATCTTGGTTTTCTTCTCCCC
TGTCGAGGAAGTACGGCTGGCATGTAATATAAATCATGATACTCAAGCAC
TTCTCAATGCCATGTACGAACATGCCCTGTCAGACGCATGTATGTGTGCA
TGGAAGCAAATTACCATGCTCTCCGAGTGCCTTGAGCAGTGTCTGCTACT
GCGTTTCGTGGGCGCGCAGCATGTTCTTCATATGTGCCCGCATACATGTA
GTGTGTAAGAAATTGGTTTGTCCAATGACGCTGTGTATTTCCTGCGAGGC
GTACGCGAAGGAGGTGGTGTGCTCTGTATTGCCCGACCGATCGAACTCCT
CCAGTATGTGGTGTCGCCGGAGATACTAAAAATACGCTAAGGTGTAGTCA
CTGCTGCGTGAAAAATAACGCGGAGATAAAATTTAGTGCAGGTATTTCAG
TATGTGGCGCTGGTTCAGAGCAGGTACATCGGGCGAAAATGGTCTCAAAC
CGGTACATTTCCCCCCCTGTAAATCACAGTGACACCAAATGCAATGCGCC
ACGCCGGAAACTCACGTGGCTCACTCTAATACGCCCACGGCAGCCAATAG
TTGAACTACGAACGAGGTATCTTGTCCTCGTCCCACCGCCGCAAAGTTGG
GAGATTTCTCGAGGGCACTGCACTGTACAGGTCGTAGGTGAAAAAACACC
CTGCGTAACGGGTTGGGGATTTCTTTCCGAAAGCGTACGGGTTGTAGAGC
ACGGAGTGCTACGTTTGTAGGCGGGGTTATACCGGTTGTAGTACAATTTG
GCAACGGGGTCTTCCTACATGATGCACACTAACCGAGCGTACCACCGAGC
GAAATTTTATTGTTTCGCACGAAGGCTGGACGTTGCTGACTGTAACAATA
ACGCTGGATTTTTTTTTTTTTTAACCCCCGGAAGGTCAGGCAAAAAACCC
TTTCCGCTACTTCCACTCTTCGGAAGATTTCTGAGTGTCTGCATTTCCTT
AACGCTGGATCTTCTGTCCCTCCTGCCCTTCGAGAAAAGACCAGGGTACA
TGCCAGCATTTTACTTGACCAAGTGTTGTTGGCAAATTAGAGAGAACTTG
AACTTGGAATATTTCGGCGTAAATCAGTGAGTCGATAATTCAATGGCCTC
GAAAATGAACCCTCTGACGTCCACGCGAAACTGCTTACTGCGACGGCGAT
GATTGTTCTCTTGTTGAACAACAGGCGCGGGAAGCTGTTCATTTTTGGGG
AAACTTTGCTGAACAAGGGCACAGGAGAAAAGGAGTGGGTCGAGCGGGGC
ATTGGAGAGATCAAGTTCCTACAGTGAGTTTGTCCGCGATATAACCTGGG
TCAATGGCTATGAGACGGTACACAACTAACGAATTGTGGATCTTCATGTC
AGATTTCATCTGTCCGTGGAACGAAACTCTCTAATATCTTGGGTCGACGT
TTTGGAAAAAATAAATAAATAATATATATATAATATATAAATGTGCTATC
AGTTCTTGATGAAATATTTTTTGGTCCCTTCATCACTAAGCATGCCATAT
CCTGATGGAAATACGGGATGGGAATATGCCTTGGTATAGTTATTGTAGTG
TTACGCCGAGAAAAACGCAACTACAGTGACACTTGTTCACTCATCCGACA
ATATATCCCGTGACATGTACGCCATGAATGATGATATGTATTGTCTCGAT
TGATGACTCATTTTGTGTAAATCAATCATTGATTCGCGGGAAAAATTATC
ACGTTAAGCGTCGTCGAGTAAAAATTCGTGAACATACATCTGTCTGAACT
CTCTGCAACTGTTGCTACTGTGATCATTAATTGCTTGCCGGGTATGTTGA
TACCCTAGACAGGTTCGAGAATCAAGGGATATGTCATATCGAGAGGAAAA
TTCCGAGAATTTATCTAGAAAGTCTTCGTCCCGAAGAAGTGAGCATCTTG
AATTTGTCTTGGCACTTGAAATATTTCACGTGAATCCGTATTATACTCAA
GTCCCCTATCCTCCCAAATCATCCCCTGTATTGGTATCATGATCTCGATG
AATCAATCAAGACACATCGAAAACCAGATGGTTCGAGTGCTGATGCGGCA
GGAGAAAACGATGAAGGTAATCTGCAATCACGTGACGGACCCACGCATCG
TGCTTAAGCCGAACGCGGGGTCGGACAGGTCTTGGGTTTGGAATGCTTTC
GACTACGCCGAGGGGCAGCTGGAAGAAACGACCTTCGCACTCCGCTGTGG
AAACTCGGACAGCGCAAATGAGTTCAAGGAGGTTAGTGCGTCTGTCGTAA
GCCCATTTTTTTCCATTTCCTCTTCTAGCAGGCTTCTGAATGATGCTTGT
GAACTTGAAGTCCGCACTCTGTTTTCGACTCACACACGACCAGCCTACAT
GCGGGCAAAACTGGCGTACCGAAGTATCGGGCTCTGGTAAGATTTACCCA
AATCTCGTGTACTGGGGATTTCGAAAAAACGACCGTCGGGAGTACATGAA
TCAAGTTGCGAAATTATATCTTGACTGACGGACTTTTTTTTTTTTCGGTT
TATACTCGTTATTGCTTTTCGGATGTGTTTTGACATCGTACTTGAGAAGC
GCTTCATGTGGTGGCGAACAGCGTGGTGGTCGAGCGTTTGTGTCAGGGTC
TGCCGTGTAATTGAGGATTGTTCTTGTTGTAACTTGGATTTCTTTCTGAT
GTAGCGAGCTGGAGAGGGGTTCTTGATGGACTTTGTCGTGGTGTAGATGA
CCTTCGAGTGTATCGAACGTTGGGAAAAAGATGAAATATTTCTTGCAGGC
AATCCCGGAAAGCTTATAATGGCAACGAACCGCCTTGGTGTAACTCACGT
GGATAAGTTGAGAGCGTTTACAATATCTTGTCACTATCCTTGCATCTTGA
TGTCGCGTGCTGTCGCTGTCGTCGTTGAATTGTGCTTTTTTTTTTTTTTC
CCCTTGTGGCAACAGCAATTTACTTCAGCCCAGAAGACAGTAGAGAGTAT
TGTGGCAGGGGAGGTGGAAGAACCCGCGGCAGCAGCAGGTGTGTTTGTAT
TTGAAATCGCGTCGAATGGCAGTTGACTTGAATCTGTTAATGCGATCATG
TTAACCGAACCAGGCACTTTTTTACGCCTAACTGATATCAACATTTTCTC
ATCTCGCTGGCAGGTGGCTATTTTGGCGATGACAAACACATGTGAATTTC
TCATCTCGTGTTGCACTGTATATAGAAATTCCTTTTGAGATGAAAAACTT
GACCTCTGGAGGATCTTGTTCGTACTCCCCGGTTAAAAGGAAAGTCTTGT
CCAGACCGCTGACTAGGTTGCACCTGAGGACGCCCTCCTCGACGATTGTT
CATGGTTGACTTCAGCTGCTCATTCGTCGGAAGCGTTTCTTAACAAAAAT
CTTGAGATAATTCAAATAAACTTTTGCTTGTATCGTTCGTTTTATTGATT
CTGTTGTATATTTTAGTTCTTTCAGCAGAGCTGTCCATTCATTTCTTGTA
CGAGCTAGTTATACGGGGATTGTATATTTGTTGACGTGATGAAGGAGGCA
AGGTTATTATTCTTCCCGGTGCCGTGCATGTCGGCCTGGACGTACGTACG
AGGGCACCCCGTCGTGAATGGTCATATTGACCCCCCTACGTTCAGATGAA
GATTATTCATCCAGAAACTAGTTCAGAGCTGAAAAATCTGCCCAAAATGA
CGATGGATTACAAAATGAAGTGGCTAGATTTTGTGTGCATTTTCGCTCAA
ATTTTGGCTTTTTCCAGTAGGCGACGGCTGTGGTACGCCATGCTTCATTG
CTGTACCTCATTCAGACTCCTCGGGATGAACAGCACCATAGTCGCCATGT
TGGCATATTGAGTAACTAAATCACTTCTTGACTTATGTCAATGACGTATT
CGCCTCATGATTCCCAGAGCCGGGAGTGCAATCGCCAGCTGTGGAGGATA
CCCCGGAGGTGGATGCGGCATCGGCCTCACTGGCAGACCTCAAGGTCGGC
GCAGAGGAGAGCACGTGAGTACTTGCACTTGAATCAAAGAACAACGCCTC
ACTGGGGAAACTCCCAGCTGTGAGCATGTAACGATTATTACAGTAATTGA
AATTTGATTATTTTTCACACGAGGGGTCGGGAAGTAGAGCAATCAGTTCT
GAACCACGGACTTACGCCCGAACTGGTAGGTTGGCTGTGAATTGAGCATA
ACTGGAAGTCCAGTCAGAGGTCTTTTAGTGGACTGCCTACCCGGTTCGGC
AGAACCGGGGTGGCGCCCACCCCGTAGAGGAGAAAGTAACTGTTCTGTTG
AAGGAAATGTAGAAATATTTTGGCAAAATACTTGGAAGTATGGAAGCATC
GGTAAAGGTTTTTGCCTCAGCCTTCAGGGGGGTAAACAACACAGTTCTGG
ATGACGACTTGAACACTGACGTTCATCCAGCCATTTGGACCTTACGAAAT
CTTCATCTCCAACATGGGTCATGATTATTGCGGAAATTAGTCTAGACATT
CTCTTGAACTAGCCAGTACCTCGTGTGTTTCATGACCGTCTATGGAATAT
GAGTTAGCTACTTTGCTTCGTGAGCTGCGAAGCCTGAATGACCTGCAGCA
AATTTCTTTTTGAAATCCACTTGATTTTCGTTGTGAGCAGAGAATCGAAG
AAATATCAGACACATGTGTTGTAGCCATGAGCTAAAGTGTGTCGTTCTTT
ATTTGGTACAACAGAGAACAAAACATATGTGAGCGTGTCATAAAGGATTT
TTTATGTATAAAGATCCAGACAAGTTTGTTTTCTTCTGGTTGTCCCGACA
TCTATTTCTAATGTTAAAGTCGTGGATCTATTTCTATATCGACGTGTCAG
TCATGTTCTATGGTTCAAATGTTTTCATGTCCAAAACTGTCTACCCCAAC
CACTCCCTGAAGTCACATCTGACCCGTTCATGTCGCGGGTATCGTGAAGA
TGTAAAGAGTATGTGAAGAAATGTAAAGCTCTCCTTCTCGACGTACGCAA
TGTGTGGTTTCCGTGCGACAATTGTGGTAGCACTAGTGGCCTTGGTCATA
ATGCCCATATAACAGAATTACATGTTTGTTTGGATAAGTGGGCCAACAGG
TGTAACATATTGCTATTTTCAAACGAGACTAAAGCAAAATGGCGCTCGTG
GTGATTTTGGATACAAACACTGATGGATTATACCTACCCCCACCTCTTGA
CCTGTCTCAATTTATCCAATGCCCGCGCTTTGACTGACCGGTGCTACGTA
ACAGATCCCCCCCGAAGGAGGCCTAACTCAGCAAGTACTGTTTCTGGTCT
CTGACCGTGAAACGGGGCCGCCGAAGGACCGCAACGATCGAGGAAGGGTT
GCCAAACAACAGCGTATGACCGTTGAGGACGTTGTATTGTTTTGTTCTCT
GTAAGATAGTTCGACGACTAAGGTACTCGTCGTTTGTAGACACTCTGACT
AGTATTGCTGCTTTTGGAATGAGGTGGGACCGAACACGGTTGGTTATTGG
GTAGTGGGCATAATTTGGCCAGCATGTTTTTTAGCCGGGAGAGGTGATGA
AGCGTGTTACTGTTTGAGTAGCTGAGGGTGTATTAGCGATGAGCGCGTTT
CTGATGCGTGTGTGCGTTTTTCTTTTGTTGTTTTTTGCCATATGTATCGA
TCATTACCGATACTGCTTCAGGTTGGCTTTGTTGGTGCCAGTAGTCGTTG
AGAGCATCCGCAGGTAGTTCAACGGCTAGTGAAAGTGGTTATTGAGAAAA
AGGAAACAAAATGACCCTCCGACACTGTCATGGAGGTGGCGTATCCCAAA
AATGGCATGGTCAAATCGAATCTGATATGCCTTGCCTGCACGGCCAGTTT
CATGTGCCCGATACTAAAGCCAGCTGGTGATTAAGTTTGCAAGAAAAATA
TGCGTTCCCTTCCTCCGCATCCCCCACCTCTCCGCTCATGTTCGTTCTAC
CATTACTCGCATGACGAAGTATCATAATTTCTTGGCGGTAATCAACACGA
GTCGGTGACCTAGAGTGGCTTAACCCCGAAGCCTCATCCATCATTCTCGA
TACTCCTCCCCTTCAACTGGAAAAAGAGATCATGGCAGTGGCTTCCGCGC
ACCTTGATTAGGCTTGTCTCTAGTTTCGTGCAGCCACTTTTGTGTGATGA
CGGCTCATATTTCGTCTGAAGTTCGAGTTCGGCTATCTCTCCCCCAGCAT
TTGAGTTTTGCGGAAGCGTGCACTGGCAAGTGTCGTTTGGATGTAGCCGC
TTTTTTTATTGGTCTATAGTACCTTGTTCACTGTGGCTCCCCTATTCCCC
CTTTGGGTGAGTAGGATGATGTGGAATTGCTGATCATGATTGTTGATGGG
ATACTTGTTTTTTGCCTGCTGCTGATAGAATAGCGTTGATGAACAATCAA
TCTGTTGCAGAGATTCCTCGAAGAATCCGTCTATCGGTATGGCTTGGTTT
GGTGGGATGATGAATATGTTATGTTTTATAGTGACCAGAAGTATCATGTA
GTGATACCGGCACGAGAATCGACCCCCCGCGTAATGGATTTCGTGGATAA
TTACGACAGCAGCAGTGGGCGGGTAACATTTTTTTTTTTTTGGAGATTGG
TGCTTTGATAATCAGCCGCGAGAGGAACGGACAGATGCATGGATGTAACG
TTGGGACATTCGCACCGAAAAATACCACAAATAACAGGTGATATCATTTT
GCGAGTATACGTTCATGTTACGATTTCACGGCGGTAGAAAATGACGTTTG
GCGGGATTAATTCCAATTTACCGTAAGTTCACAGTTCATGATCAAGCCAC
CACATTATTTTGGGCTTCTACTTGGCCGTTTGATACACATGTAAATGACA
GTAACATTGGTTCGCCCTCAACATGTATGGGTGAGAAAATGTAGGGTTTT
AACGGATGCGAATTCTGCT back to topCoding sequence (CDS) from alignment at H-paniculata_contig1850:13293..23311+ >mRNA_H-paniculata_contig1850.4559.1 ID=mRNA_H-paniculata_contig1850.4559.1|Name=mRNA_H-paniculata_contig1850.4559.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1506bp|location=Sequence derived from alignment at H-paniculata_contig1850:13293..23311+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTGACTTTGCGGAGATCGCAGCTAAAGCCCAAGAAGAAACGGAGTC
CACACCTGAGCCGACTGTGCCCAAGGCCGCCGCTGCACAAGGCGTCGATG
GTGCAGATGAGGCTTCGGCCGGAGCAGACGTGGGTGCGGTAGTTCCAGAG
GAGGAAAGCACGGCGCAGTTCGAGCCTGTTGTTCAGCTGGAGGAAGTAGA
GGTGAAGACCCACGAGGAAGATGAGAGGGTGCTATGGAAGATATGTCTGA
CTTTGCGGAGATCGCAGCTAAAGCCCAAGAAGAAACGGAGTCCACACCTG
AGCCGACTGTGCCCAAGGCCGCCGCTGCACAAGGCGTCGATGGTGCAGAT
GAGGCTTCGGCCGGAGCAGACGTGGGTGCGGTAGTTCCAGAGGAGGAAAG
CACGGCGCAGTTCGAGCCTGTTGTTCAGCTGGAGGAAGTAGAGGTGAAGA
CCCACGAGGAAGATGAGAGGGTGCTATGGAAGATGCGCGGGAAGCTGTTC
ATTTTTGGGGAAACTTTGCTGAACAAGGGCACAGGAGAAAAGGAGTGGGT
CGAGCGGGGCATTGGAGAGATCAAGTTCCTACAGCGCGGGAAGCTGTTCA
TTTTTGGGGAAACTTTGCTGAACAAGGGCACAGGAGAAAAGGAGTGGGTC
GAGCGGGGCATTGGAGAGATCAAGTTCCTACAACACATCGAAAACCAGAT
GGTTCGAGTGCTGATGCGGCAGGAGAAAACGATGAAGGTAATCTGCAATC
ACGTGACGGACCCACGCATCGTGCTTAAGCCGAACGCGGGGTCGGACAGG
TCTTGGGTTTGGAATGCTTTCGACTACGCCGAGGGGCAGCTGGAAGAAAC
GACCTTCGCACTCCGCTGTGGAAACTCGGACAGCGCAAATGAGTTCAAGG
AGACACATCGAAAACCAGATGGTTCGAGTGCTGATGCGGCAGGAGAAAAC
GATGAAGGTAATCTGCAATCACGTGACGGACCCACGCATCGTGCTTAAGC
CGAACGCGGGGTCGGACAGGTCTTGGGTTTGGAATGCTTTCGACTACGCC
GAGGGGCAGCTGGAAGAAACGACCTTCGCACTCCGCTGTGGAAACTCGGA
CAGCGCAAATGAGTTCAAGGAGCAATTTACTTCAGCCCAGAAGACAGTAG
AGAGTATTGTGGCAGGGGAGGTGGAAGAACCCGCGGCAGCAGCAGCAATT
TACTTCAGCCCAGAAGACAGTAGAGAGTATTGTGGCAGGGGAGGTGGAAG
AACCCGCGGCAGCAGCAGAGCCGGGAGTGCAATCGCCAGCTGTGGAGGAT
ACCCCGGAGGTGGATGCGGCATCGGCCTCACTGGCAGACCTCAAGGTCGG
CGCAGAGGAGAGCACAGCCGGGAGTGCAATCGCCAGCTGTGGAGGATACC
CCGGAGGTGGATGCGGCATCGGCCTCACTGGCAGACCTCAAGGTCGGCGC
AGAGGAGAGCACATCCCCCCCGAAGGAGGCCTAAATCCCCCCCGAAGGAG
GCCTAA back to top
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