prot_H-paniculata_contig18494.4556.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18494.4556.1
Unique Nameprot_H-paniculata_contig18494.4556.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length103
Homology
BLAST of mRNA_H-paniculata_contig18494.4556.1 vs. uniprot
Match: A0A4D9D4Q9_9STRA (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4Q9_9STRA)

HSP 1 Score: 130 bits (326), Expect = 2.600e-34
Identity = 56/98 (57.14%), Postives = 71/98 (72.45%), Query Frame = 0
Query:    9 KDDVSGGWRCAAVLEDGATRTIRCCDWSPCGRFIAAVCFDGTCSIWIKQT----AGAELTFDLSATLEGHENEVKSAAWNKGGNLLATCGRDKTVWIW 102
            +++  G WR  A L DG TRT+RCC+WSPCG  +AAV FD TC IW  Q     AG E+ ++L+A++EGHE+E K  AWN+GG LLATC RDK+VWIW
Sbjct:   67 QEEGGGTWRLLATLGDGQTRTVRCCEWSPCGNMLAAVSFDSTCVIWELQPSRAQAGREMEWELAASVEGHEHEAKCVAWNRGGTLLATCSRDKSVWIW 164          
BLAST of mRNA_H-paniculata_contig18494.4556.1 vs. uniprot
Match: F0XXR8_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXR8_AURAN)

HSP 1 Score: 119 bits (298), Expect = 1.440e-30
Identity = 52/96 (54.17%), Postives = 64/96 (66.67%), Query Frame = 0
Query:   14 GGWRCAAVLEDGATRTIRCCDWSPCGRFIAAVCFDGTCSIWIKQTAGAE-------LTFDLSATLEGHENEVKSAAWNKGGNLLATCGRDKTVWIW 102
            G W   + L+D   RT+R CDWSPCGR++AAV FDGTC +W +             L +++ ATLEGHENEVK AAWN    LLATCGRDK+VW+W
Sbjct:   31 GAWGLVSTLDDAHERTVRKCDWSPCGRYLAAVSFDGTCCVWRRADXXXXXXXXXXPLEWEIIATLEGHENEVKGAAWNASATLLATCGRDKSVWLW 126          
BLAST of mRNA_H-paniculata_contig18494.4556.1 vs. uniprot
Match: E9FYH9_DAPPU (Probable cytosolic iron-sulfur protein assembly protein Ciao1 n=3 Tax=Daphnia TaxID=6668 RepID=E9FYH9_DAPPU)

HSP 1 Score: 117 bits (294), Expect = 8.260e-30
Identity = 52/102 (50.98%), Postives = 69/102 (67.65%), Query Frame = 0
Query:    1 TLRVWCRSKDDVSGGWRCAAVLEDGATRTIRCCDWSPCGRFIAAVCFDGTCSIWIKQTAGAELTFDLSATLEGHENEVKSAAWNKGGNLLATCGRDKTVWIW 102
            T+R+W R+ +  S  W C ++L DG  RTIR   +SPC + I++  FDGTC IW K T+     ++ +ATLEGHENEVK  AW+  G+ LATC RDK+VWIW
Sbjct:   37 TIRLWGRNVN--SNDWVCRSILSDGHQRTIRSVSFSPCNKLISSASFDGTCCIWDKSTSTEGNQYECTATLEGHENEVKCVAWSASGSFLATCSRDKSVWIW 136          
BLAST of mRNA_H-paniculata_contig18494.4556.1 vs. uniprot
Match: A0A8J2S7J1_9CRUS (Probable cytosolic iron-sulfur protein assembly protein Ciao1 n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2S7J1_9CRUS)

HSP 1 Score: 119 bits (297), Expect = 5.300e-29
Identity = 52/102 (50.98%), Postives = 69/102 (67.65%), Query Frame = 0
Query:    1 TLRVWCRSKDDVSGGWRCAAVLEDGATRTIRCCDWSPCGRFIAAVCFDGTCSIWIKQTAGAELTFDLSATLEGHENEVKSAAWNKGGNLLATCGRDKTVWIW 102
            T+R+W R+   V+  W C ++L DG  RTIR   +SPC + IA+  FDGTC IW K T+     ++ +ATLEGHENEVK  AW+  G+ L+TC RDK+VWIW
Sbjct:   84 TIRLWGRN---VNSDWVCRSILSDGHQRTIRSVSFSPCNKLIASASFDGTCCIWDKSTSAEGNQYECTATLEGHENEVKCVAWSASGSFLSTCSRDKSVWIW 182          
BLAST of mRNA_H-paniculata_contig18494.4556.1 vs. uniprot
Match: A0A6H5JAP6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAP6_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 1.150e-26
Identity = 55/105 (52.38%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    1 TLRVWCRSKDDVSGGWRCAAVLEDGATRTIRCCDWSPCGRFIAAVCFDGTCSIWIKQ---TAGAELTFDLSATLEGHENEVKSAAWNKGGNLLATCGRDKTVWIW 102
            T+RVWC+SKD   G WRCAA+LEDGA                             +Q   T   EL +DL+ATLEGHENEVKS AW++GGNLLATCGRDK+VWIW
Sbjct:   37 TIRVWCQSKDSEKG-WRCAALLEDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQESTTTAGELAWDLTATLEGHENEVKSVAWSRGGNLLATCGRDKSVWIW 140          
BLAST of mRNA_H-paniculata_contig18494.4556.1 vs. uniprot
Match: UPI001ED8787A (probable cytosolic iron-sulfur protein assembly protein Ciao1 isoform X2 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8787A)

HSP 1 Score: 109 bits (272), Expect = 2.140e-26
Identity = 51/108 (47.22%), Postives = 66/108 (61.11%), Query Frame = 0
Query:    1 TLRVWCRS---KDDVSGGWRCAAVLEDGATRTIRCCDWSPCGRFIAAVCFDGTCSIWIKQ---TAGAELTFDLSATLEGHENEVKSAAWNKGGNLLATCGRDKTVWIW 102
            T+R+W  S   + D  G W C + L D   RTIR   WSPCG  +A+  FD T +IW ++     G    F+  ATLEGHE+EVKS +W + G LLATC RD++VWIW
Sbjct:   37 TIRLWTNSPSSQGDKLGNWTCRSTLVDAHQRTIRAIAWSPCGHRLASASFDSTTAIWERRQQLNTGRGADFECVATLEGHESEVKSVSWARSGRLLATCSRDRSVWIW 144          
BLAST of mRNA_H-paniculata_contig18494.4556.1 vs. uniprot
Match: D7FXR6_ECTSI (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR6_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 8.250e-26
Identity = 54/105 (51.43%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    1 TLRVWCRSKDDVSGGWRCAAVLEDGATRTIRCCDWSPCGRFIAAVCFDGTCSIWIKQ---TAGAELTFDLSATLEGHENEVKSAAWNKGGNLLATCGRDKTVWIW 102
            T+RVWC+SKD    GWRCAA+LEDGA                             +Q   T   EL ++L+ATLEGHENEVKS AW++GGNLLATCGRDK+VWIW
Sbjct:   37 TIRVWCQSKDS-ENGWRCAALLEDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQESTTTAGELAWELTATLEGHENEVKSVAWSRGGNLLATCGRDKSVWIW 140          
BLAST of mRNA_H-paniculata_contig18494.4556.1 vs. uniprot
Match: A0A212CWK1_CEREH (CIAO1 n=1 Tax=Cervus elaphus hippelaphus TaxID=46360 RepID=A0A212CWK1_CEREH)

HSP 1 Score: 103 bits (258), Expect = 1.150e-25
Identity = 48/92 (52.17%), Postives = 56/92 (60.87%), Query Frame = 0
Query:   16 WRCAAVLEDGATRTIRCCDWSPCGRFIAAVCFDGTCSIWIKQTAGAE-----LTFDLSATLEGHENEVKSAAWNKGGNLLATCGRDKTVWIW 102
            W C +VL +G  RT+R   WSPCG ++A+  FD T  IW K     E      T     TLEGHENEVKS AW   GNLLATC RDK+VW+W
Sbjct:    9 WNCKSVLCEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNEDDFEAILSPFTVQCVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVW 100          
BLAST of mRNA_H-paniculata_contig18494.4556.1 vs. uniprot
Match: A0A2R5GR77_9STRA (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GR77_9STRA)

HSP 1 Score: 106 bits (264), Expect = 3.130e-25
Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = 0
Query:    1 TLRVWCRSKD--DVSGG----------WRCAAVLEDGATRTIRCCDWSPCGRFIAAVCFDGTCSIWIK------QTAGAELTFDLSATLEGHENEVKSAAWNKGGNLLATCGRDKTVWIW 102
            ++RVW +S      +GG          W C A LED  +RT+R C++SPCG ++AA  FD T  IW +        +GA   ++  + LEGHENEVKS AW+  G+++ATC RDK++WIW
Sbjct:   51 SIRVWAKSPKAPGAAGGAAAASPAEDEWLCVATLEDTQSRTVRSCEFSPCGSYLAAASFDATVVIWQRGHREADDGSGAIEEWECVSVLEGHENEVKSVAWSADGSMIATCSRDKSIWIW 170          
BLAST of mRNA_H-paniculata_contig18494.4556.1 vs. uniprot
Match: A0A2D4BT33_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BT33_PYTIN)

HSP 1 Score: 102 bits (254), Expect = 1.380e-24
Identity = 51/102 (50.00%), Postives = 64/102 (62.75%), Query Frame = 0
Query:    1 TLRVWCRSKDDVSGGWRCAAVLEDGATRTIRCCDWSPCGRFIAAVCFDGTCSIWIKQTAGAELTFDLSATLEGHENEVKSAAWNKGGNLLATCGRDKTVWIW 102
            T+R+W        G W C A+LED   RTIR C+WSP GRFIA+V FD T  IW KQ      T+++ ++LEGHE+EVKS AW+  G       RDK+VWIW
Sbjct:   10 TIRLWAPPAK-AGGVWECVAILEDAQGRTIRACEWSPNGRFIASVSFDATTVIWEKQGD----TYEVISSLEGHESEVKSVAWSPSG------ARDKSVWIW 100          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18494.4556.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4D9D4Q9_9STRA2.600e-3457.14Probable cytosolic iron-sulfur protein assembly pr... [more]
F0XXR8_AURAN1.440e-3054.17Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
E9FYH9_DAPPU8.260e-3050.98Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A8J2S7J1_9CRUS5.300e-2950.98Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A6H5JAP6_9PHAE1.150e-2652.38Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
UPI001ED8787A2.140e-2647.22probable cytosolic iron-sulfur protein assembly pr... [more]
D7FXR6_ECTSI8.250e-2651.43Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A212CWK1_CEREH1.150e-2552.17CIAO1 n=1 Tax=Cervus elaphus hippelaphus TaxID=463... [more]
A0A2R5GR77_9STRA3.130e-2542.50Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A2D4BT33_PYTIN1.380e-2450.00Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 15..55
e-value: 1.6E-4
score: 31.1
coord: 64..102
e-value: 2.7E-4
score: 30.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 25..54
e-value: 1.1E-4
score: 22.9
coord: 68..102
e-value: 4.9E-7
score: 30.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 71..102
score: 14.786
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..102
e-value: 3.0E-30
score: 107.2
IPR028608Probable cytosolic iron-sulfur protein assembly protein, CIAO1/Cia1PANTHERPTHR19920WD40 PROTEIN CIAO1coord: 12..102
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..102
score: 15.821
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18494contigH-paniculata_contig18494:767..5097 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18494.4556.1mRNA_H-paniculata_contig18494.4556.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18494 767..5097 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18494.4556.1 ID=prot_H-paniculata_contig18494.4556.1|Name=mRNA_H-paniculata_contig18494.4556.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp
TLRVWCRSKDDVSGGWRCAAVLEDGATRTIRCCDWSPCGRFIAAVCFDGT
CSIWIKQTAGAELTFDLSATLEGHENEVKSAAWNKGGNLLATCGRDKTVW
IW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR028608CIAO1/Cia1
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf