prot_H-paniculata_contig18483.4550.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18483.4550.1
Unique Nameprot_H-paniculata_contig18483.4550.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length772
Homology
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BLAST of mRNA_H-paniculata_contig18483.4550.1 vs. uniprot
Match: A0A6H5K4K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4K0_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 1.170e-33
Identity = 66/92 (71.74%), Postives = 77/92 (83.70%), Query Frame = 0 
Query:    7 DPSGRMKGYLHPGCVEEHGPDLAPGAALILKEVSIFVTGPGTTRLLNIHPDCLLGVFAADTPLPPPERLDWLRTCDPPFTPRFSSVAGDENP 98
            DPSGR+KG+LHPGC+EEHGP L PGAAL+LKEVSIFV+GP TTRLLN+HPDC+L VFAADT  P P RL+WL TCDPPFTP+    +G+  P
Sbjct:  198 DPSGRIKGHLHPGCLEEHGPSLGPGAALLLKEVSIFVSGPATTRLLNVHPDCVLAVFAADTSPPAPSRLEWLTTCDPPFTPQAVPDSGNGRP 289
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BLAST of mRNA_H-paniculata_contig18483.4550.1 vs. uniprot
Match: D8LFD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFD2_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 2.070e-32
Identity = 58/75 (77.33%), Postives = 66/75 (88.00%), Query Frame = 0 
Query:    7 DPSGRMKGYLHPGCVEEHGPDLAPGAALILKEVSIFVTGPGTTRLLNIHPDCLLGVFAADTPLPPPERLDWLRTC 81
            DPSGR+KG+LHPGC+EEHGP L PGAAL+LKEVSIFV+GPGTTRLLN+HPDC+L VF ADT  P P RL+WL TC
Sbjct:  124 DPSGRIKGHLHPGCLEEHGPSLGPGAALLLKEVSIFVSGPGTTRLLNVHPDCVLAVFPADTSPPAPSRLEWLTTC 198
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BLAST of mRNA_H-paniculata_contig18483.4550.1 vs. uniprot
Match: A0A836CMX7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMX7_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.050e-11
Identity = 31/64 (48.44%), Postives = 44/64 (68.75%), Query Frame = 0 
Query:    7 DPSGRMKGYLHPGCVEEHGPDLAPGAALILKEVSIFVTGPGTTRLLNIHPDCLLGVFAADTPLP 70
            DP+G+++  +H   + EH  DL  GAAL L+  +I+V+GPGT R LNIHPD ++ VF   TP+P
Sbjct:   83 DPTGKIQAVVHQQALFEHAGDLVTGAALALRRAAIWVSGPGTQRALNIHPDNIMAVFPVSTPMP 146
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18483.4550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K4K0_9PHAE1.170e-3371.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFD2_ECTSI2.070e-3277.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CMX7_9STRA2.050e-1148.44Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028045Protein of unknown function DUF4539PFAMPF15072DUF4539coord: 6..65
e-value: 8.4E-12
score: 45.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18483contigH-paniculata_contig18483:1028..4093 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18483.4550.1mRNA_H-paniculata_contig18483.4550.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18483 988..4604 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18483.4550.1 ID=prot_H-paniculata_contig18483.4550.1|Name=mRNA_H-paniculata_contig18483.4550.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=772bp
MQNVRQDPSGRMKGYLHPGCVEEHGPDLAPGAALILKEVSIFVTGPGTTR
LLNIHPDCLLGVFAADTPLPPPERLDWLRTCDPPFTPRFSSVAGDENPDP
CRSQRPATPPLPPTTPTSPTPTTTAARRRPRPVNRGKGKTPARQPARRPS
PPPPPPLPRIDTGVSEVIDLAARTQMDVSTQVSGNGDATRMGRSGGRCGV
VDGVFQGTRGLRGNRELGGHISGSVGRLLPAHGSGSGSSGLPQVQPSLRS
PLSLSSASSGVASQNCCPSQDLSNATVVEKLSPSSDSSPSSRLGDGLTLG
QSTLVEGDMATEPDGVARELCDSEGQGVGLAGTAASETLSITQQEGDLEE
TTVRGERRSSYRELAMEHHISGGNDGLYSPRRATHVSHGEGHSRLDGARG
NAKAREGSGIVSRQPPTGNVESLTRTMNRDDATEAGAGARTNAVSPRAPT
AGLCSQRDRQRTSSPSTTGQPLLRRAESARNDGNDVARAPRAAVTVATEA
TENSSAGQNAHYQDASSKAAAHPAGPGGGSDPDVGRDPPTLAAYSKSIWA
NLDGLDSDDGSEPNSNVNLNPRPEKAHGTLCSDNAVATSTSFDHGVTRLA
ASPFTSHVLRPGGRTGGGLVAKSAETPWTTSGQDGAAGIEDSGSSNPKRG
ATAQQGMKETGDSSDKLGCQERLLSNQATIENGDSMNSQETVASRSLSAE
RLDTFVSTGGMEPGGRLSMCSNISTSAGVSFGPTLSLFSLAGGMSGGGVD
RASGRIAMDDDILDAALDDSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028045DUF4539