prot_H-paniculata_contig18471.4547.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18471.4547.1
Unique Nameprot_H-paniculata_contig18471.4547.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length117
Homology
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BLAST of mRNA_H-paniculata_contig18471.4547.1 vs. uniprot
Match: A0A6H5K9B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B8_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 2.320e-10
Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 0 
Query:   74 VALCWEGGEEVSRPDWRAFTKYEEKAKQAGRRVREFSYRL 113
            V+ CW GGE   RP WR FTKYEEKA++AGRRVR+FSYRL
Sbjct:  226 VSGCWVGGETAERPSWRPFTKYEEKAREAGRRVRDFSYRL 265
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BLAST of mRNA_H-paniculata_contig18471.4547.1 vs. uniprot
Match: D8LNW3_ECTSI (tRNA (Guanine-N(7)-)-methyltransferase trmB n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNW3_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 2.160e-9
Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 0 
Query:   74 VALCWEGGEEVSRPDWRAFTKYEEKAKQAGRRVREFSYRL 113
            V+ CW GGE   RP WR FTKYEEKA++AGR VR+F+YRL
Sbjct:  321 VSACWVGGETAERPSWRPFTKYEEKAREAGRSVRDFAYRL 360
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18471.4547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K9B8_9PHAE2.320e-1072.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNW3_ECTSI2.160e-967.50tRNA (Guanine-N(7)-)-methyltransferase trmB n=1 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18471contigH-paniculata_contig18471:3200..3550 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18471.4547.1mRNA_H-paniculata_contig18471.4547.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18471 62..3713 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18471.4547.1 ID=prot_H-paniculata_contig18471.4547.1|Name=mRNA_H-paniculata_contig18471.4547.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp
MKVVQGYLTAKKLDVHVATAAAEVETEQTERPGSEQERGPTERSGPIARE
GLEAPVQRIVVAEKGCVVAGKGAVALCWEGGEEVSRPDWRAFTKYEEKAK
QAGRRVREFSYRLRRV*
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