prot_H-paniculata_contig1846.4544.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1846.4544.1
Unique Nameprot_H-paniculata_contig1846.4544.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length265
Homology
BLAST of mRNA_H-paniculata_contig1846.4544.1 vs. uniprot
Match: A0A6H5JZT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZT1_9PHAE)

HSP 1 Score: 357 bits (917), Expect = 4.470e-121
Identity = 177/262 (67.56%), Postives = 219/262 (83.59%), Query Frame = 0
Query:    6 PDVLKTVGAVVILLATVGGSALPFLSLAPE--TSGPKTVRVVDEEGNTSERGSMTAMTRAEIQKKLAQVPVFFLRDPNGGVHVDGGEGLFFMNPADAQAKIAGMTGVDGVKVSATTLDDVWYPLIKKKGQNKKSVAAEAAVNSDLSARYRIIPRVDQVSQASGTDGWNSVGDKDGVPVWAANSLAFQ-AGSRYKTPLFTNMDDLMTSWQRLKTEAGSKSEAPVVQVSSIGAIVEIMESGGGDNRNLEFFADMDSIEQAEKLL 264
            P+  KT+G V+I+ +T+G SA+PFLSL P+  + GPKTVRVVDE+GNTSERG +TAMTR EIQKKL+Q+PVFFLRD +G VHV+ GEGLFFM+P DA+ K+  + G +G KV+ATTLDD+WYPLIKKKG NKK VAA A+  SDLS RYRIIPR +QV+QA  T GWN+V D  GVPVWAA +LAF+ AG++ K PLFTN+DDLMTSW RL+TE GS++++P +QVSSIGAI+++M+ GGGD RNLEFFADMD+IEQAEKLL
Sbjct:   70 PNFTKTLGTVLIVGSTIGVSAIPFLSLGPQQQSKGPKTVRVVDEDGNTSERGILTAMTRPEIQKKLSQIPVFFLRDESGAVHVENGEGLFFMSPGDAKEKLQDLKGAEGTKVAATTLDDIWYPLIKKKGLNKKPVAAGASGLSDLSCRYRIIPRSNQVAQALETQGWNAVADAGGVPVWAAETLAFRGAGNKMKLPLFTNVDDLMTSWDRLETEGGSEAKSPTIQVSSIGAIIDMMQRGGGDQRNLEFFADMDAIEQAEKLL 331          
BLAST of mRNA_H-paniculata_contig1846.4544.1 vs. uniprot
Match: D7G9I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I2_ECTSI)

HSP 1 Score: 293 bits (749), Expect = 2.110e-88
Identity = 150/260 (57.69%), Postives = 193/260 (74.23%), Query Frame = 0
Query:    6 PDVLKTVGAVVILLATVGGSALPFLSLAPETSGPKTVRVVDEEGNTSERGSMTAMTRAEIQKKLAQVPVFFLRDPNGGVHVDGGEGLFFMNPADAQAKIAGMTGVDGVKVSATTLDDVWYPLIKKKGQNKKSVAAEAAVNSDLSARYRIIPRVDQVSQASGTDGWNSVGDKDGVPVWAANSLAFQA-GSRYKTPLFTNMDDLMTSWQRLKTEAGSKSEAPVVQVSSIGAIVEIMESGGGDNRNLEFFADMDSIEQAEKLL 264
            P+  KT+G V+I+ +T+G SA+PFLSL P+    +                + A++   +     ++PVFFLRD +G VHV+ GEGLFFM+P DA+ K+  + G +G KV+ATTLDDVWYPLIKKKG NK SVAA A+  SDLSARYRIIPR +QV+QA  T GWN+V D  GVPVWAA +LAF+  G++ K PLFTN+DDLMTSW RL+TE GS++++P +QVSSIGAI+++M+ GGGD RNLEFFADMD+IEQAEKLL
Sbjct:  835 PNFTKTLGTVLIVGSTIGVSAIPFLSLGPQQQALR----------------LYALSTKTVTLPK-EIPVFFLRDESGAVHVENGEGLFFMSPGDAKEKLQDLKGAEGTKVAATTLDDVWYPLIKKKGLNKNSVAAGASGLSDLSARYRIIPRSNQVAQALETQGWNAVADAGGVPVWAAETLAFRGTGNKMKLPLFTNVDDLMTSWDRLETEGGSEAKSPTIQVSSIGAIIDMMQRGGGDQRNLEFFADMDAIEQAEKLL 1077          
BLAST of mRNA_H-paniculata_contig1846.4544.1 vs. uniprot
Match: A0A7S2V776_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V776_9STRA)

HSP 1 Score: 121 bits (304), Expect = 6.100e-29
Identity = 76/233 (32.62%), Postives = 131/233 (56.22%), Query Frame = 0
Query:   36 TSGPKTVRVVDEEGNTSERGSMTAMTRAEIQKKLAQVPVFFLRDPNGGVHVDGGEGLFFMNPADAQAKIAGMTGVDG-VKVSATTLDDVWYPLIKKKGQNKKSVAAEAAVNSDLSARYRII-PRVDQVSQASGTDGWNSVGDKDGVPVWAANSLAFQ-AGSRYKTPLFTNMDDLMTSWQRLKTEAGSKSEAPV-VQVSSIGAIVEIMESGGGDNRNLEFFADMDSIEQAEKLL 264
            TSG     +V+E+G   +RG  T  +  E+ +KLA VPVF+++   GGV ++ G+G F+ + ++A+A    + G D   KVS T LD+V++ LI+KK +    +++   V SD +A Y ++ P++     A     +      DG+P++A+  LAF+ A  R + PLF +  DL ++W +L+      S+ P  V+V+ +  I+  M SGG D R LEF+    +++   +L+
Sbjct:  111 TSGRPASVMVEEDGQMVKRGIYTKFSTGEMNRKLAAVPVFYVKSSAGGVALENGQGTFYTDVSEAEAAFERIKGSDSDAKVSTTALDEVYFSLIRKKIKTVGGLSSPLVVASDATATYTVVSPKLAMEDAAMVNKDYTP----DGIPLFASQKLAFRDAEGRQQIPLFLSYQDLESTWGKLREANPKLSKIPEQVEVTGLNYILGEMASGGQDFRLLEFYPTSKALDSYSELI 339          
BLAST of mRNA_H-paniculata_contig1846.4544.1 vs. uniprot
Match: A0A0G4F5C5_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F5C5_VITBC)

HSP 1 Score: 114 bits (285), Expect = 1.200e-26
Identity = 78/230 (33.91%), Postives = 127/230 (55.22%), Query Frame = 0
Query:   50 NTSERGSM-TAMTRAEIQKKLAQVPVFFLRDPNGGVHVD-GGE---GLFFMNPADAQAKIAGMTGVDGVK-----VSATTLDDVWYPLIKKKGQNKKSVAAEAAVNSDLSARYRIIPRVDQVSQASGT-DGWNSVGDKDG-VPVWAANSLAFQAG-----SRYKTPLFTNMDDLMTSWQRLKTEAGSKSEAPVVQVSSIGAIVEIMESGGG--DNRNLEFFADMDSIEQA 260
            N + R  M  A++RAEI +KL QVPVF++   +G V++D  G+   G FF+ P++A   +  +   D ++     + A  L DV++PL+KK+G+ K           D SA + ++P   +++ A      W+    K G VP+W   SLAF+       SR + PLF  ++DL  SW+RLK E+ +  + P V+ S++G+ VE++E GG     +  EFF   D+I++A
Sbjct:   55 NVNPRAQMGQALSRAEITRKLDQVPVFYVVTSDGRVNIDQSGDRRMGRFFLEPSEATQALEDLKMSDYIQWKDAFIGAARLGDVYFPLVKKEGKLKSF-----PYYVDTSAAFAVVPSNKELANAQKRIPNWSEGPGKAGEVPIWGTQSLAFEGDGDSPTSRLRIPLFIRLEDLEESWRRLKAESPTLPDKPDVRASTLGSSVEMLEEGGTPLSPKVFEFFPSPDAIQKA 279          
BLAST of mRNA_H-paniculata_contig1846.4544.1 vs. uniprot
Match: A0A7S4IB04_9STRA (Hypothetical protein n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IB04_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 6.140e-20
Identity = 84/283 (29.68%), Postives = 140/283 (49.47%), Query Frame = 0
Query:    3 NDGPDVLKTVGAVVILLATVGGSALPFL-SLAPETSGPKTVRVVDEEGNTSERGSMTAM---------TRAEIQKKLAQVPVFFLRDPNGGVHVDGGEGLFFMNPADAQAKIAGMTGVDGVKVSATTLDDVWYPLIKKKGQNKKSVA------AEAAVNSDLSA---RYRIIPRVDQVSQASGTDGWNSVGDKDGVPVWAANSLAFQAGSRYKTPLFTNMDDLMTSWQRLKTEAGSK-SEAPVVQVSSIGAIVEIMESGGGDN-RNLEFFADMDSIEQAEKLL 264
            + GP ++ T+    IL+  +G S  PFL S   +TS   T ++ +      +  ++  M         +R +IQ+KL+ +P F+L D   G       G  + + ADA+A     + +    V ATTLD V YPL+ K+G+ K +        AE A+    SA    Y++IP    V  A+G     + GD   VP++ A+ +AF + S  + PLF   +D +TS++RL+   G+K  E P ++ S++   ++ ME G       L F+A    + QA++L+
Sbjct:   96 DGGPGIVTTIALAGILVIFLGSSVAPFLDSFNSDTSDSVTSQLANTAVTRQDPDALKQMQYQSKYDRLSRTKIQEKLSGMPAFYLVDGTTGEM----SGEIYTSYADAKAASEASSSM----VKATTLDQVMYPLVLKRGRTKMAPPPQEVKRAEEAIERHGSAGSKTYKLIPSAAAVEGAAGMKMELANGD---VPLFIADRVAFASSSGPQVPLFLEKEDAVTSYRRLREAGGNKLPEEPNIRSSTLLEEIDSMERGTRPGVSQLAFYAPERDLIQADELM 367          
BLAST of mRNA_H-paniculata_contig1846.4544.1 vs. uniprot
Match: A0A448YVR1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVR1_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.780e-17
Identity = 77/245 (31.43%), Postives = 122/245 (49.80%), Query Frame = 0
Query:   10 KTVGAVVILLATVGGSALPFLSLAPETSGPKTVRVVDEEGNTSER--GSMT-AMTRAEIQKKLAQVPVFFLRDPNGGVHVDGGEGL---FFMNPADAQAKIAGMTGVDGVKVSATTLDDVWYPLIKKKGQNKKSVA------AEAAVNS-DLSARYRIIPRVDQVSQASGTDGWNSVGDKDGVPVWAANSLAFQAGSRYKTPLFTNMDDLMTSWQRLKTEAGSKSEAPVVQVSSIGAIVEIMESG 241
             ++ A V+L   + GS +P        S P    VV  +    ++  GS T A++R+ IQ+KL  VPVF++    G    DG   +    +M+ +DA  K+A    +    V  TTLD V YPL+ K+G+ + +        AEA + + D S  +R++P    V QA   D   S  D   VP++ A+ LAF +    + PLF N DD +TS++RL+    S  E P ++ +++   +  ME G
Sbjct:   30 SSIVAGVLLAVFLXGSLIPLAGTFDLKSAPIADSVVTRQDQPGKQIAGSKTYALSRSAIQEKLNTVPVFYVATTGG----DGSAQMSTDIYMSYSDA--KVAS-DSIPSSSVKGTTLDQVMYPLVLKRGRMRMAPPPAEIEQAEAKIMAGDRSDIFRLVPSKISVEQAKQLDLETSQSD---VPLFIADRLAFASTKGAQLPLFLNKDDCITSYKRLREAKSSLPEQPNIRTTTLLETLISMEKG 264          
BLAST of mRNA_H-paniculata_contig1846.4544.1 vs. uniprot
Match: B5YM12_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YM12_THAPS)

HSP 1 Score: 85.9 bits (211), Expect = 1.320e-15
Identity = 63/215 (29.30%), Postives = 114/215 (53.02%), Query Frame = 0
Query:   59 AMTRAEIQKKLAQVPVFFLRDPNGGVHVDGGEGLFFMNPADAQAKIAGMTGVDGVKVSATTLDDVWYPLIKKKGQNKKSVAAEAAVNS-----DLSARYRIIPRVDQVSQASGTDGWNSVGDKDGVPVWAANSLAFQA-GSRYKTPLFTNMDDLMTSWQRLKTEAGSK-SEAPVVQVSSIGAIVEIMESGG--GDNRNLEFFADMDSIEQAEKLL 264
            A++  +IQ+KL  +PVF++ D  G   + G E ++F + ++A++   G+ G   VKV  TTLD + YPLI K+G  K S      + S          Y+++P    ++ A  T      GD   +P++    LAF     + + PLF    D +TS+ RL+   G+K  E P ++ +S+  +++ ME G   G  R L+F+ +++ + +A++++
Sbjct:  176 ALSMEKIQEKLENLPVFYVGDGRG---IMGNENVYF-SYSEAESAAKGIGGSSVVKV--TTLDQIMYPLILKRGNVKVSSVTPVEIRSAQQQQSADKTYKLVPSAAALNDAKDTSTTLKEGD---IPLFIVERLAFAGPDGKPQVPLFLEKIDAITSYARLRESGGNKLPEEPTLRTTSLLDVLDSMERGTRPGVGR-LQFYGEVEDVLKADEMM 380          
BLAST of mRNA_H-paniculata_contig1846.4544.1 vs. uniprot
Match: A0A835YYZ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYZ9_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.590e-15
Identity = 58/155 (37.42%), Postives = 86/155 (55.48%), Query Frame = 0
Query:   11 TVGAVVILLAT-VGGSALPFLSLAPETS----GPK-TVRVVDEEGNTSERGSMTA------------------MTRAEIQKKLAQVPVFFLRDPNGGVHVDG-GEGLFFMNPADAQAKIAGMTGVDG---VKVSATTLDDVWYPLIKKKGQNKKS 137
            +V  V++ LA  VG S +  L+  P  +     P+ TV+V  E G   +RG++T+                  +TR EIQKKL+Q+PVF++ +  GG +V G G G F+M+  DA A +A ++       + V+ATTLDDVWYPLI +KG   +S
Sbjct:   78 SVAFVLVALALFVGASVMTLLNAPPPAATSSYAPQGTVKVTTESGRVVQRGALTSVCYFTNTTPGACCHGRRSLTRGEIQKKLSQLPVFYISNAQGGAYVGGDGIGRFYMSADDAAADLAALSDAAAPSELSVAATTLDDVWYPLIARKGGASQS 232          
BLAST of mRNA_H-paniculata_contig1846.4544.1 vs. uniprot
Match: A0A7S2XPN7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XPN7_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.200e-13
Identity = 77/280 (27.50%), Postives = 128/280 (45.71%), Query Frame = 0
Query:    3 NDGPDVLKTVGAVVILLATVGGSALPFLSLAPETS------GPKTVRVVDEEGNTSE-RGSMTAMTRAEIQKKLAQVPVFFL-RDPNGGVHVDGGEGLFFMNPADAQAKIAGMTGVDGVKVSATTLDDVWYPLIKKKGQNKKSV-------AAEAAVNSDLSAR-YRIIPRVDQVSQASGTDGWNSVGDKDGVPVWAANSLAFQAGSRYKTPLFTNMDDLMTSWQRLKTEAGSKSEA-PVVQVSSIGAIVEIMESGGGDN-RNLEFFADMDSIEQAEKLL 264
            +DGP +   V  V  L+  VG S  P L  A  +       G   V   D  G       S   ++R +IQ+KL +VPVF+L   PN  +     +   +++  DA +         G  V  TTLD V YPL+ K+G+ + +        A E      LS + +++IP    +  A+ T     + D D +P++ A+ LAF   +  + PLF    D +TS+ RL+   G +  A P ++ +++   +  ME G       L+F++  D + +A ++L
Sbjct:   94 DDGPGIGTIVTIVFFLVVFVGTSLAPMLDAARNSPTGDLNLGDSVVTRQDPPGKLKNYENSSDKLSRTKIQEKLNRVPVFYLVSGPNREM-----QEKIYLSFEDATSAAG-----SGATVKCTTLDQVMYPLVLKRGRMRMAPPPLEVQQAEETLQAQGLSTKNFKLIPSKAAIKDAAETK--TDLADGD-IPLFVADRLAFAGDAGPQVPLFFEKADCITSYDRLRESRGDRIPAQPNIRSTTLMDELYSMEKGTRPAVSQLQFYSTADDLMRASEML 360          
BLAST of mRNA_H-paniculata_contig1846.4544.1 vs. uniprot
Match: A0A1E7FKF1_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKF1_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.490e-12
Identity = 62/215 (28.84%), Postives = 103/215 (47.91%), Query Frame = 0
Query:   59 AMTRAEIQKKLAQVPVFFLR-DPNGGVHVDGGEGLFFMNPADAQAKIAGMTGVDGVKVSATTLDDVWYPLIKKKGQNKKSVA------AEAAVNSDLSARYRIIPRVDQVSQASGTDGWNSVGD--KDGVPVWAANSLAFQAGSRYKTPLFTNMDDLMTSWQRLKTEAGSKSEAPVVQVSSIGAIVEIMESGGGDNRN-LEFFADMDSIEQAEKL 263
            +++R+ IQ+KL  +PVF++    N  +  D      +++  DA    AG     G  V  TTLD V YPL+ K+G+ + +        AE  + S+    Y +IP    + Q    +    VGD  K  +P++ A+ LAF +    + PLF +  D + S++RL+    S  E P ++ SS+   +  ME G     N L F+A    + +  +L
Sbjct:   90 SLSRSAIQEKLNAIPVFYITTSDNNNMSTD-----IYLSYEDANNVAAG-----GSIVKGTTLDQVMYPLVLKRGRMRMAPPPSEVELAEKNLLSNNEKSYFLIPSTKAIDQYKEFN----VGDLSKSDIPLFVADRLAFASPKGPQLPLFLDKSDCIASYKRLRNGKSSLPEEPTIRTSSLLETLITMEKGTRPGVNQLAFYATEQDLTKVAEL 290          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1846.4544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JZT1_9PHAE4.470e-12167.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9I2_ECTSI2.110e-8857.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V776_9STRA6.100e-2932.62Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0G4F5C5_VITBC1.200e-2633.91Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S4IB04_9STRA6.140e-2029.68Hypothetical protein n=3 Tax=Odontella aurita TaxI... [more]
A0A448YVR1_9STRA3.780e-1731.43Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
B5YM12_THAPS1.320e-1529.30Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A835YYZ9_9STRA1.590e-1537.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XPN7_9STRA1.200e-1327.50Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A1E7FKF1_9STRA1.490e-1228.84Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007378Tic22-likePFAMPF04278Tic22coord: 39..240
e-value: 5.3E-11
score: 42.4
IPR007378Tic22-likePANTHERPTHR33926FAMILY NOT NAMEDcoord: 38..244
NoneNo IPR availableGENE3D3.40.1350.100coord: 59..263
e-value: 6.9E-27
score: 96.1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..264
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1846contigH-paniculata_contig1846:16941..21448 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1846.4544.1mRNA_H-paniculata_contig1846.4544.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1846 16465..21513 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1846.4544.1 ID=prot_H-paniculata_contig1846.4544.1|Name=mRNA_H-paniculata_contig1846.4544.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=265bp
MGNDGPDVLKTVGAVVILLATVGGSALPFLSLAPETSGPKTVRVVDEEGN
TSERGSMTAMTRAEIQKKLAQVPVFFLRDPNGGVHVDGGEGLFFMNPADA
QAKIAGMTGVDGVKVSATTLDDVWYPLIKKKGQNKKSVAAEAAVNSDLSA
RYRIIPRVDQVSQASGTDGWNSVGDKDGVPVWAANSLAFQAGSRYKTPLF
TNMDDLMTSWQRLKTEAGSKSEAPVVQVSSIGAIVEIMESGGGDNRNLEF
FADMDSIEQAEKLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007378Tic22-like