prot_H-paniculata_contig1844.4535.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1844.4535.1
Unique Nameprot_H-paniculata_contig1844.4535.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length52
Homology
BLAST of mRNA_H-paniculata_contig1844.4535.1 vs. uniprot
Match: D7G0U4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U4_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 1.100e-16
Identity = 36/49 (73.47%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 MARLGVPLVEGDLIVKDQAWATPPEDGRHYHQMVPMEVFTLLGRLTSPY 49
            M+RLGVP VEGDLIVKDQ WATP  DGRHYH +VP+EV+  LG L SPY
Sbjct:  448 MSRLGVPFVEGDLIVKDQEWATPKSDGRHYHMLVPVEVWEFLGVLISPY 496          
BLAST of mRNA_H-paniculata_contig1844.4535.1 vs. uniprot
Match: D7FKK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKK8_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 1.570e-7
Identity = 21/37 (56.76%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    1 MARLGVPLVEGDLIVKDQAWATPPEDGRHYHQMVPME 37
            M+RLGVP+V+   IV+ Q WA+P  DGRH+H++VP+E
Sbjct:  105 MSRLGVPVVDAAKIVEGQGWASPANDGRHFHKLVPIE 141          
BLAST of mRNA_H-paniculata_contig1844.4535.1 vs. uniprot
Match: D7FJN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN9_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 6.540e-7
Identity = 21/37 (56.76%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    1 MARLGVPLVEGDLIVKDQAWATPPEDGRHYHQMVPME 37
            M+RLGVP+V+   IV+ Q WA+P  DGRH+H++VP+E
Sbjct:  321 MSRLGVPVVDAAKIVEGQGWASPANDGRHFHKLVPIE 357          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1844.4535.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0U4_ECTSI1.100e-1673.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FKK8_ECTSI1.570e-756.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FJN9_ECTSI6.540e-756.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1844contigH-paniculata_contig1844:23855..24010 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1844.4535.1mRNA_H-paniculata_contig1844.4535.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1844 23855..24031 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1844.4535.1 ID=prot_H-paniculata_contig1844.4535.1|Name=mRNA_H-paniculata_contig1844.4535.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=52bp
MARLGVPLVEGDLIVKDQAWATPPEDGRHYHQMVPMEVFTLLGRLTSPYG
I*
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