prot_H-paniculata_contig18430.4531.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18430.4531.1
Unique Nameprot_H-paniculata_contig18430.4531.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length606
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18430.4531.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..127
NoneNo IPR availablePANTHERPTHR23355:SF54coord: 65..138
NoneNo IPR availablePANTHERPTHR23355RIBONUCLEASEcoord: 65..138
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 1..55
score: 13.565
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 81..136
IPR004087K Homology domainSMARTSM00322kh_6coord: 1..60
e-value: 0.0018
score: 27.5
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 1..56
e-value: 2.6E-9
score: 36.8
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 1..60
e-value: 2.2E-9
score: 39.1
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 1..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18430contigH-paniculata_contig18430:200..2255 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18430.4531.1mRNA_H-paniculata_contig18430.4531.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18430 2..3336 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18430.4531.1 ID=prot_H-paniculata_contig18430.4531.1|Name=mRNA_H-paniculata_contig18430.4531.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=606bp
MEIPHRFVGAVMGNGGAVIRSMTAETGAVVDMDVERGRLLVKGSAESVAA
AISLVKAAVDKEKTKEAQVKKQQARERRAAQQQQQQQQQQQQQQQQQQQK
QKQKQQQQQQNQQQQQQQQNQQQQQQQPNPTIASPVHPVSSDKSYDRSSD
PDATLATSVVSHDTGTHLRMDETTSTLTCAAAHVVAPSPPLTPKKTAQNG
LVGDRVPASFPPSTPQSSPRPRSLSSAGAADSSSQSFAFPIGDPRSTQGA
KATGNRGSSGATSGTGGQSGDGGATESELILASLHSVEVSSTTEEQAKAK
AAEAAAGKGDVGVGVPSGAEGKRQPQEKQSQPQPQQDKKKKKKKKKKQQH
DGEGGACTRPFSREAPAISSEFSGTRSPPTCSPDASPAATCVSDSSPPPT
NPRTAITARHFTDESHGQRAPPSPRRPSAPLSSSPPPPGRPPVGVEAQRL
LEMLIAVETKPSLSSSSTSAAGKKSIKGTTATKSSPRTPAAGGHGANFSS
GANGASISTNPTMSSVPILVEGSGRRAGSGSGGGVSGSKTNIIGLVGGAS
GVGSGTGAVAGGSGAPSCSANARIPTGSLLSSNSLVVSCTGGDYFTSNSG
IRVRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR004088KH_dom_type_1
IPR036612KH_dom_type_1_sf