|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 2166 |
| Cds size | 1818 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18430.4531.1 >prot_H-paniculata_contig18430.4531.1 ID=prot_H-paniculata_contig18430.4531.1|Name=mRNA_H-paniculata_contig18430.4531.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=606bp
MEIPHRFVGAVMGNGGAVIRSMTAETGAVVDMDVERGRLLVKGSAESVAA
AISLVKAAVDKEKTKEAQVKKQQARERRAAQQQQQQQQQQQQQQQQQQQK
QKQKQQQQQQNQQQQQQQQNQQQQQQQPNPTIASPVHPVSSDKSYDRSSD
PDATLATSVVSHDTGTHLRMDETTSTLTCAAAHVVAPSPPLTPKKTAQNG
LVGDRVPASFPPSTPQSSPRPRSLSSAGAADSSSQSFAFPIGDPRSTQGA
KATGNRGSSGATSGTGGQSGDGGATESELILASLHSVEVSSTTEEQAKAK
AAEAAAGKGDVGVGVPSGAEGKRQPQEKQSQPQPQQDKKKKKKKKKKQQH
DGEGGACTRPFSREAPAISSEFSGTRSPPTCSPDASPAATCVSDSSPPPT
NPRTAITARHFTDESHGQRAPPSPRRPSAPLSSSPPPPGRPPVGVEAQRL
LEMLIAVETKPSLSSSSTSAAGKKSIKGTTATKSSPRTPAAGGHGANFSS
GANGASISTNPTMSSVPILVEGSGRRAGSGSGGGVSGSKTNIIGLVGGAS
GVGSGTGAVAGGSGAPSCSANARIPTGSLLSSNSLVVSCTGGDYFTSNSG
IRVRL* back to topmRNA from alignment at H-paniculata_contig18430:2..3336- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig18430.4531.1 ID=mRNA_H-paniculata_contig18430.4531.1|Name=mRNA_H-paniculata_contig18430.4531.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3335bp|location=Sequence derived from alignment at H-paniculata_contig18430:2..3336- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACTGGCGCTACCATCAAGGTCGGGTCGGGAGGGGGAGGAGCGGCGGGAGG
GGCAGGGTTTGTGTGCATCTGGGGGGAGCCCAATTCCGTCGCTGCGGCCA
AGCGCCAGGTATCTGGTCTTTCGCAAGCGGTTTTATCTGTCTCTTAATAT
TCATCATGTTCTCATCAGGATGGAAGCGCTTCGCAAGCAAAATAACGTTT
TTGTATCCCACAATATACCCTAGGTTTATAGGTGATAAACCGAAGGGGTG
ACCGATACGACAATATTCCCCGCGTTCTGCGAGGGTCGGAAATCGGGGCT
CGAGTAATTTTACCGTGCCGTGGGCTTAAGCTCCTTCCCTCACAACGCTT
CCGAGCCGTAAAGGTGATTCTTTGCGCTCTGGGGTAGAAAATAACGTTTT
CGTATACTTACGTGTATTGTCTTCAGCTACTGTAGGCGTCGGCGGGCACG
TCAGACCCGCGAAGGGGTCACCGGAGAGCGTGCCCCGAGGGCTGCCTACT
TGAAGTGCATTGACGGAAAAATAAAGTGTCCGTTGTATACGGCAAAGAGA
CTTTTGTTCAGAGTGGGACATACTGACCCTTTCCGACCAATGGCCGGCAT
ACGGTTGAAGAAATATGGTGTAGTAAGTTCCTCGTGAAGATGTGTATGGT
CCAAAGCAACTCCACCTGCCCATCTGTCTTCGTCTTTGGCAAAGATCAGG
TCACCGGCGAATATTTGCCTGCGGAGATAAAAGACGGAGAGCCCAAAACT
ATTTTCGGCGGCAAGCCGCCAAATATGCGTCGGAACAGCATTTAGGCTTC
CGCGGAAAAGGCACACTTTGTTTCAATTTCGTGGCAGTGCCCGGGAAACC
CCCCCCCCCAGAATATGATGTCGTCGGCGTCGTATGTGTGTAGCATTATT
ATTGATGTGTACCGACACTAATGAAAGAGTTAGTGTCGACAATGATAAGA
GAGTTTGTCGCGACATGAGGCGGGAACAAATGTTCATGTTCCTTGTGCCG
TCGTTTGTGTATATCATACTCTTGGGAATTTTTTAAAAGGTGGAGGAATT
CGTCCGACATTGGACCGAATCCCGCGAGGGGATGGAAATCCCTCATAGAT
TTGTCGGCGCCGTGATGGGTAACGGGGGCGCGGTGATTCGTTCGATGACT
GCCGAAACCGGGGCTGTAGTCGACATGGACGTGGAGAGAGGGCGGCTCTT
GGTCAAAGGGTCGGCAGAGTCGGTGAGAGTTTTTTTTTTTATGCATCGGT
TTGTTGTTACCTGTATGTCGCGTGGTAGTATGTGTAAATAGATGGACCAG
GGACAGGAATGACGTATCGTTTCCGTTTCGGGGTATATTTATTCTTGGGC
TATTTCACGTTTACATTTGGTACATCTTGTCGTACTCGTTTTGGCCGGTT
TTGGCCGTTCACCCTCGTCACCGCAACGCCTCTTTCTGAAATATCTGTGA
ACAATGACAGGTGGCCGCTGCGATTTCTCTGGTGAAAGCAGCTGTAGATA
AAGAGAAAACCAAAGAAGCACAGGTCAAAAAGCAGCAGGCTCGCGAACGA
CGCGCTGCTCAACAGCAACAGCAGCAGCAGCAGCAACAGCAACAGCAACA
GCAACAGCAACAGCAAAAGCAAAAGCAAAAGCAACAGCAGCAGCAGCAAA
ATCAACAACAGCAACAGCAACAGCAAAATCAACAACAGCAACAGCAACAA
CCAAACCCGACTATCGCGTCACCTGTACACCCGGTGAGTAGCGATAAGTC
GTACGACCGTAGTAGTGACCCCGACGCCACCTTAGCTACCTCCGTCGTAT
CACATGACACCGGAACTCATCTTCGAATGGATGAGACGACGAGTACGCTG
ACCTGCGCTGCTGCCCACGTAGTGGCACCCTCTCCACCGTTGACGCCCAA
AAAGACGGCGCAGAATGGGCTTGTCGGCGACAGAGTCCCAGCCTCCTTCC
CTCCATCGACGCCGCAATCTTCGCCTCGACCGAGAAGCCTCTCTTCTGCC
GGAGCCGCTGATTCCTCGAGCCAGTCGTTCGCCTTCCCGATCGGTGATCC
GCGCTCGACTCAAGGAGCGAAGGCAACGGGGAACCGGGGCAGTAGTGGAG
CTACCTCAGGTACCGGAGGTCAGAGTGGAGATGGAGGAGCAACCGAGTCG
GAACTTATTCTCGCTAGTTTGCATAGTGTAGAAGTATCTTCGACTACAGA
GGAGCAGGCGAAGGCGAAGGCGGCGGAGGCGGCGGCGGGGAAAGGGGACG
TGGGGGTAGGCGTCCCCAGTGGCGCGGAAGGGAAGCGGCAACCGCAGGAG
AAGCAGTCGCAGCCGCAGCCGCAGCAGGACAAGAAGAAGAAGAAAAAGAA
GAAGAAGAAGCAGCAGCACGACGGAGAAGGAGGGGCATGCACTCGCCCTT
TTTCTCGCGAGGCGCCCGCGATCTCAAGCGAATTCTCCGGTACACGAAGC
CCGCCAACTTGTTCTCCCGATGCTTCTCCCGCAGCAACATGTGTCTCCGA
TAGTAGCCCCCCCCCCACCAACCCCCGCACTGCCATCACGGCGCGACATT
TCACAGACGAAAGTCACGGACAGAGGGCGCCACCATCCCCTCGCCGCCCC
TCCGCCCCGCTCTCATCTTCCCCCCCCCCACCTGGACGACCGCCTGTCGG
CGTTGAGGCGCAGCGCTTGCTCGAGATGCTCATCGCGGTCGAGACGAAGC
CATCATTATCATCATCATCAACTTCGGCGGCGGGCAAGAAAAGCATCAAG
GGTACAACGGCAACGAAATCTTCTCCACGTACTCCGGCGGCGGGTGGGCA
CGGAGCTAATTTCTCGTCGGGCGCCAACGGCGCTTCGATCTCAACAAATC
CGACCATGTCCTCGGTGCCGATTCTTGTGGAAGGAAGCGGACGCCGAGCC
GGCAGCGGCAGCGGTGGCGGCGTTAGCGGCAGCAAGACGAACATTATAGG
TTTGGTTGGCGGTGCAAGCGGGGTCGGGAGCGGAACCGGTGCTGTAGCAG
GCGGCAGTGGTGCACCATCGTGTTCCGCCAACGCGCGTATCCCCACGGGG
TCGTTACTGAGCTCGAATTCTTTGGTAGTGTCATGCACTGGGGGAGATTA
CTTCACCTCTAACAGCGGGATTCGAGTGCGGCTTTGAACTGAGGTCAGCA
GTGATGGGTGTGGGGCGAGCTCACGACGCTGTGTCTGGTGGTTTGTTGCA
CGTGCAATGTATTTTTGCTGTGAAAATTTTGTTTTTTGCTGTGTTGATGT
TTGACCGGCTACGTATTGTGATGCCCTACTGTACTGCAGCCAGAGGAGAG
AGGAGATATTGGTGCTAGAGGCGGAATACGTCCTT back to topCoding sequence (CDS) from alignment at H-paniculata_contig18430:2..3336- >mRNA_H-paniculata_contig18430.4531.1 ID=mRNA_H-paniculata_contig18430.4531.1|Name=mRNA_H-paniculata_contig18430.4531.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3636bp|location=Sequence derived from alignment at H-paniculata_contig18430:2..3336- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAATCCCTCATAGATTTGTCGGCGCCGTGATGGGTAACGGGGGCGC
GGTGATTCGTTCGATGACTGCCGAAACCGGGGCTGTAGTCGACATGGACG
TGGAGAGAGGGCGGCTCTTGGTCAAAGGGTCGGCAGAGTCGATGGAAATC
CCTCATAGATTTGTCGGCGCCGTGATGGGTAACGGGGGCGCGGTGATTCG
TTCGATGACTGCCGAAACCGGGGCTGTAGTCGACATGGACGTGGAGAGAG
GGCGGCTCTTGGTCAAAGGGTCGGCAGAGTCGGTGGCCGCTGCGATTTCT
CTGGTGAAAGCAGCTGTAGATAAAGAGAAAACCAAAGAAGCACAGGTCAA
AAAGCAGCAGGCTCGCGAACGACGCGCTGCTCAACAGCAACAGCAGCAGC
AGCAGCAACAGCAACAGCAACAGCAACAGCAACAGCAAAAGCAAAAGCAA
AAGCAACAGCAGCAGCAGCAAAATCAACAACAGCAACAGCAACAGCAAAA
TCAACAACAGCAACAGCAACAACCAAACCCGACTATCGCGTCACCTGTAC
ACCCGGTGAGTAGCGATAAGTCGTACGACCGTAGTAGTGACCCCGACGCC
ACCTTAGCTACCTCCGTCGTATCACATGACACCGGAACTCATCTTCGAAT
GGATGAGACGACGAGTACGCTGACCTGCGCTGCTGCCCACGTAGTGGCAC
CCTCTCCACCGTTGACGCCCAAAAAGACGGCGCAGAATGGGCTTGTCGGC
GACAGAGTCCCAGCCTCCTTCCCTCCATCGACGCCGCAATCTTCGCCTCG
ACCGAGAAGCCTCTCTTCTGCCGGAGCCGCTGATTCCTCGAGCCAGTCGT
TCGCCTTCCCGATCGGTGATCCGCGCTCGACTCAAGGAGCGAAGGCAACG
GGGAACCGGGGCAGTAGTGGAGCTACCTCAGGTACCGGAGGTCAGAGTGG
AGATGGAGGAGCAACCGAGTCGGAACTTATTCTCGCTAGTTTGCATAGTG
TAGAAGTATCTTCGACTACAGAGGAGCAGGCGAAGGCGAAGGCGGCGGAG
GCGGCGGCGGGGAAAGGGGACGTGGGGGTAGGCGTCCCCAGTGGCGCGGA
AGGGAAGCGGCAACCGCAGGAGAAGCAGTCGCAGCCGCAGCCGCAGCAGG
ACAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGCAGCAGCACGACGGAGAA
GGAGGGGCATGCACTCGCCCTTTTTCTCGCGAGGCGCCCGCGATCTCAAG
CGAATTCTCCGGTACACGAAGCCCGCCAACTTGTTCTCCCGATGCTTCTC
CCGCAGCAACATGTGTCTCCGATAGTAGCCCCCCCCCCACCAACCCCCGC
ACTGCCATCACGGCGCGACATTTCACAGACGAAAGTCACGGACAGAGGGC
GCCACCATCCCCTCGCCGCCCCTCCGCCCCGCTCTCATCTTCCCCCCCCC
CACCTGGACGACCGCCTGTCGGCGTTGAGGCGCAGCGCTTGCTCGAGATG
CTCATCGCGGTCGAGACGAAGCCATCATTATCATCATCATCAACTTCGGC
GGCGGGCAAGAAAAGCATCAAGGGTACAACGGCAACGAAATCTTCTCCAC
GTACTCCGGCGGCGGGTGGGCACGGAGCTAATTTCTCGTCGGGCGCCAAC
GGCGCTTCGATCTCAACAAATCCGACCATGTCCTCGGTGCCGATTCTTGT
GGAAGGAAGCGGACGCCGAGCCGGCAGCGGCAGCGGTGGCGGCGTTAGCG
GCAGCAAGACGAACATTATAGGTTTGGTTGGCGGTGCAAGCGGGGTCGGG
AGCGGAACCGGTGCTGTAGCAGGCGGCAGTGGTGCACCATCGTGTTCCGC
CAACGCGCGTATCCCCACGGGGTCGTTACTGAGCTCGAATTCTTTGGTAG
TGTCATGCACTGGGGGAGATTACTTCACCTCTAACAGCGGGATTCGAGTG
CGGCTTTGAGTGGCCGCTGCGATTTCTCTGGTGAAAGCAGCTGTAGATAA
AGAGAAAACCAAAGAAGCACAGGTCAAAAAGCAGCAGGCTCGCGAACGAC
GCGCTGCTCAACAGCAACAGCAGCAGCAGCAGCAACAGCAACAGCAACAG
CAACAGCAACAGCAAAAGCAAAAGCAAAAGCAACAGCAGCAGCAGCAAAA
TCAACAACAGCAACAGCAACAGCAAAATCAACAACAGCAACAGCAACAAC
CAAACCCGACTATCGCGTCACCTGTACACCCGGTGAGTAGCGATAAGTCG
TACGACCGTAGTAGTGACCCCGACGCCACCTTAGCTACCTCCGTCGTATC
ACATGACACCGGAACTCATCTTCGAATGGATGAGACGACGAGTACGCTGA
CCTGCGCTGCTGCCCACGTAGTGGCACCCTCTCCACCGTTGACGCCCAAA
AAGACGGCGCAGAATGGGCTTGTCGGCGACAGAGTCCCAGCCTCCTTCCC
TCCATCGACGCCGCAATCTTCGCCTCGACCGAGAAGCCTCTCTTCTGCCG
GAGCCGCTGATTCCTCGAGCCAGTCGTTCGCCTTCCCGATCGGTGATCCG
CGCTCGACTCAAGGAGCGAAGGCAACGGGGAACCGGGGCAGTAGTGGAGC
TACCTCAGGTACCGGAGGTCAGAGTGGAGATGGAGGAGCAACCGAGTCGG
AACTTATTCTCGCTAGTTTGCATAGTGTAGAAGTATCTTCGACTACAGAG
GAGCAGGCGAAGGCGAAGGCGGCGGAGGCGGCGGCGGGGAAAGGGGACGT
GGGGGTAGGCGTCCCCAGTGGCGCGGAAGGGAAGCGGCAACCGCAGGAGA
AGCAGTCGCAGCCGCAGCCGCAGCAGGACAAGAAGAAGAAGAAAAAGAAG
AAGAAGAAGCAGCAGCACGACGGAGAAGGAGGGGCATGCACTCGCCCTTT
TTCTCGCGAGGCGCCCGCGATCTCAAGCGAATTCTCCGGTACACGAAGCC
CGCCAACTTGTTCTCCCGATGCTTCTCCCGCAGCAACATGTGTCTCCGAT
AGTAGCCCCCCCCCCACCAACCCCCGCACTGCCATCACGGCGCGACATTT
CACAGACGAAAGTCACGGACAGAGGGCGCCACCATCCCCTCGCCGCCCCT
CCGCCCCGCTCTCATCTTCCCCCCCCCCACCTGGACGACCGCCTGTCGGC
GTTGAGGCGCAGCGCTTGCTCGAGATGCTCATCGCGGTCGAGACGAAGCC
ATCATTATCATCATCATCAACTTCGGCGGCGGGCAAGAAAAGCATCAAGG
GTACAACGGCAACGAAATCTTCTCCACGTACTCCGGCGGCGGGTGGGCAC
GGAGCTAATTTCTCGTCGGGCGCCAACGGCGCTTCGATCTCAACAAATCC
GACCATGTCCTCGGTGCCGATTCTTGTGGAAGGAAGCGGACGCCGAGCCG
GCAGCGGCAGCGGTGGCGGCGTTAGCGGCAGCAAGACGAACATTATAGGT
TTGGTTGGCGGTGCAAGCGGGGTCGGGAGCGGAACCGGTGCTGTAGCAGG
CGGCAGTGGTGCACCATCGTGTTCCGCCAACGCGCGTATCCCCACGGGGT
CGTTACTGAGCTCGAATTCTTTGGTAGTGTCATGCACTGGGGGAGATTAC
TTCACCTCTAACAGCGGGATTCGAGTGCGGCTTTGA back to top
|