prot_H-paniculata_contig18421.4526.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18421.4526.1
Unique Nameprot_H-paniculata_contig18421.4526.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length114
Homology
BLAST of mRNA_H-paniculata_contig18421.4526.1 vs. uniprot
Match: A0A6H5KMF3_9PHAE (Hist_deacetyl domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMF3_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 1.220e-63
Identity = 103/114 (90.35%), Postives = 107/114 (93.86%), Query Frame = 0
Query:    1 HLDGDTAVSRNSFEAAMFAAGSVCDAIDRVMTGRNRNAFCAVRPPGHHAGPRGLVTCSNDMAGSHGFCLLNNVAIGAAYARCVHRHTGVDRVAIVDFDVHHGNGTEEIVKALVP 114
            HLDGDTAVS NSFEAA+ AAGSVCD +DRVMTGRNRNAFCAVRPPGHHAG RGLVTC+ND  GSHGFCLLNNVAIGAAYARCVHRHTGV+RVAIVDFDVHHGNGTE IVKALVP
Sbjct:  645 HLDGDTAVSHNSFEAALRAAGSVCDGVDRVMTGRNRNAFCAVRPPGHHAGTRGLVTCANDGTGSHGFCLLNNVAIGAAYARCVHRHTGVERVAIVDFDVHHGNGTEHIVKALVP 758          
BLAST of mRNA_H-paniculata_contig18421.4526.1 vs. uniprot
Match: A0A8J9SU04_PHATR (Hypothetical protein (Fragment) n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SU04_PHATR)

HSP 1 Score: 179 bits (455), Expect = 1.730e-55
Identity = 85/114 (74.56%), Postives = 98/114 (85.96%), Query Frame = 0
Query:    2 LDGDTAVSRNSFEAAMFAAGSVCDAIDRVMTGRNRNAFCAVRPPGHHAGPRGLVTCSNDM-AGSHGFCLLNNVAIGAAYARCVHRHTGVDRVAIVDFDVHHGNGTEEIVKALVP 114
            LD DTA+S  +FEAAM AAGSVC A+D+V+ G NRNAFCAVRPPGHHAGP G+V C+ND   GSHGFCLLNNVAIGAAYAR ++RH G+ +VAIVDFDVHHGNGTEEI++ LVP
Sbjct:    1 LDPDTAISHWTFEAAMRAAGSVCQAVDQVIAGENRNAFCAVRPPGHHAGPTGIVKCANDPEGGSHGFCLLNNVAIGAAYARSMYRHEGIQKVAIVDFDVHHGNGTEEIIRNLVP 114          
BLAST of mRNA_H-paniculata_contig18421.4526.1 vs. uniprot
Match: A0A7S4IZS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IZS9_9STRA)

HSP 1 Score: 187 bits (475), Expect = 2.520e-54
Identity = 89/113 (78.76%), Postives = 100/113 (88.50%), Query Frame = 0
Query:    2 LDGDTAVSRNSFEAAMFAAGSVCDAIDRVMTGRNRNAFCAVRPPGHHAGPRGLVTCSNDMAGSHGFCLLNNVAIGAAYARCVHRHTGVDRVAIVDFDVHHGNGTEEIVKALVP 114
            LD DTAVSR SFEAAM AAG VC+A+DRVM+G  RNAFCAVRPPGHHAGPRG+VTC ND  GSHGFCLLNNVAIGA+YAR ++R+ GV RVAI+DFDVHHGNGTEEIV+ L+P
Sbjct:  166 LDADTAVSRWSFEAAMRAAGGVCEAVDRVMSGDYRNAFCAVRPPGHHAGPRGVVTCPNDPDGSHGFCLLNNVAIGASYARSMYRNEGVKRVAIIDFDVHHGNGTEEIVRQLIP 278          
BLAST of mRNA_H-paniculata_contig18421.4526.1 vs. uniprot
Match: A0A1Z5J6P1_FISSO (Hist_deacetyl domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6P1_FISSO)

HSP 1 Score: 187 bits (474), Expect = 9.500e-53
Identity = 89/115 (77.39%), Postives = 102/115 (88.70%), Query Frame = 0
Query:    1 HLDGDTAVSRNSFEAAMFAAGSVCDAIDRVMTGRNRNAFCAVRPPGHHAGPRGLVTCSNDM-AGSHGFCLLNNVAIGAAYARCVHRHTGVDRVAIVDFDVHHGNGTEEIVKALVP 114
            HLDGDTA+SR SFEAAM AAGSVC+A+D+V+ G  RNAFCAVRPPGHHAGPRG+V C+ND   GSHGFCLLNNVAIGAAYAR ++R+ G+ RVAIVDFDVHHGNGTEEI++ LVP
Sbjct:  554 HLDGDTAISRWSFEAAMRAAGSVCEAVDKVIAGDLRNAFCAVRPPGHHAGPRGIVKCANDPEGGSHGFCLLNNVAIGAAYARSMYRNEGIQRVAIVDFDVHHGNGTEEIIRQLVP 668          
BLAST of mRNA_H-paniculata_contig18421.4526.1 vs. uniprot
Match: A0A7S2UJ04_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJ04_9STRA)

HSP 1 Score: 186 bits (472), Expect = 2.100e-52
Identity = 87/113 (76.99%), Postives = 102/113 (90.27%), Query Frame = 0
Query:    2 LDGDTAVSRNSFEAAMFAAGSVCDAIDRVMTGRNRNAFCAVRPPGHHAGPRGLVTCSNDMAGSHGFCLLNNVAIGAAYARCVHRHTGVDRVAIVDFDVHHGNGTEEIVKALVP 114
            LDGDTAVSR SFEAA+ AAGSVC+A+D+VM+G  RN+FCAVRPPGHHAGPRG+V C+ND  GSHGFCLLNNVAIGAAYAR ++R+ G+ +VAI+DFDVHHGNGTEEIV+ LVP
Sbjct:  672 LDGDTAVSRWSFEAALRAAGSVCEAVDKVMSGDFRNSFCAVRPPGHHAGPRGIVKCANDPEGSHGFCLLNNVAIGAAYARTMYRNDGIRKVAIIDFDVHHGNGTEEIVRQLVP 784          
BLAST of mRNA_H-paniculata_contig18421.4526.1 vs. uniprot
Match: B8C1J3_THAPS (Histone deacetylase 1 HDAC Hda1p n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1J3_THAPS)

HSP 1 Score: 181 bits (460), Expect = 7.820e-52
Identity = 84/113 (74.34%), Postives = 99/113 (87.61%), Query Frame = 0
Query:    2 LDGDTAVSRNSFEAAMFAAGSVCDAIDRVMTGRNRNAFCAVRPPGHHAGPRGLVTCSNDMAGSHGFCLLNNVAIGAAYARCVHRHTGVDRVAIVDFDVHHGNGTEEIVKALVP 114
            LD DT VSR SFEAA+ AAGSVC+A+D+VM+G  RNAFCAVRPPGHHAGPRG+VTC ND  GSHGFCLLNNVAIGAAYAR ++R+ G+ +VAI+DFDVHHGNGTE+IV+ + P
Sbjct:  317 LDADTTVSRWSFEAALRAAGSVCEAVDKVMSGDFRNAFCAVRPPGHHAGPRGIVTCPNDPDGSHGFCLLNNVAIGAAYARSMYRNDGIKKVAIIDFDVHHGNGTEDIVRQITP 429          
BLAST of mRNA_H-paniculata_contig18421.4526.1 vs. uniprot
Match: A0A7S3Q0M5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0M5_9STRA)

HSP 1 Score: 184 bits (467), Expect = 9.870e-52
Identity = 83/114 (72.81%), Postives = 99/114 (86.84%), Query Frame = 0
Query:    1 HLDGDTAVSRNSFEAAMFAAGSVCDAIDRVMTGRNRNAFCAVRPPGHHAGPRGLVTCSNDMAGSHGFCLLNNVAIGAAYARCVHRHTGVDRVAIVDFDVHHGNGTEEIVKALVP 114
            HLD DT +SR SFE+AM A+GSVC+A+DR+M G  RNAFCAVRPPGHHAGPRG+V C ND  GSHGFCLLNNVAIGAAYARC++R+ G+ +VAI+DFDVHHGNGTE +++ LVP
Sbjct:  650 HLDTDTGMSRWSFESAMRASGSVCEAVDRIMAGDFRNAFCAVRPPGHHAGPRGIVKCENDPEGSHGFCLLNNVAIGAAYARCMYRNDGIKKVAIIDFDVHHGNGTEAVIRNLVP 763          
BLAST of mRNA_H-paniculata_contig18421.4526.1 vs. uniprot
Match: A0A7S2QZ77_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2QZ77_9STRA)

HSP 1 Score: 180 bits (457), Expect = 8.380e-51
Identity = 84/113 (74.34%), Postives = 97/113 (85.84%), Query Frame = 0
Query:    2 LDGDTAVSRNSFEAAMFAAGSVCDAIDRVMTGRNRNAFCAVRPPGHHAGPRGLVTCSNDMAGSHGFCLLNNVAIGAAYARCVHRHTGVDRVAIVDFDVHHGNGTEEIVKALVP 114
            LD DTA+SR SFE A+ A+GSVCDA+DRVM G  RNAFCAVRPPGHHAGPRG+V C+ND  GSHGFCLLNNVAIGAAYAR ++R+ G+ +VAI+DFDVHHGNGTE IV+ L P
Sbjct:  300 LDADTAISRWSFEGALRASGSVCDAVDRVMAGDFRNAFCAVRPPGHHAGPRGIVKCANDPEGSHGFCLLNNVAIGAAYARSMYRNDGIKKVAIIDFDVHHGNGTEAIVRNLTP 412          
BLAST of mRNA_H-paniculata_contig18421.4526.1 vs. uniprot
Match: A0A1E7FPA2_9STRA (Arginase/deacetylase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FPA2_9STRA)

HSP 1 Score: 174 bits (441), Expect = 8.560e-51
Identity = 80/115 (69.57%), Postives = 97/115 (84.35%), Query Frame = 0
Query:    1 HLDGDTAVSRNSFEAAMFAAGSVCDAIDRVMTGRNRNAFCAVRPPGHHAGPRGLVTCSNDM-AGSHGFCLLNNVAIGAAYARCVHRHTGVDRVAIVDFDVHHGNGTEEIVKALVP 114
            +LD DT +SR SFE+A+ A GSVC+A+D+V+ G NRNAFC VRPPGHHAGPRG+V C ND   GSHGFC LNNVAIGAAYAR ++R+ G+ ++AIVDFDVHHGNGTEEI++ LVP
Sbjct:   14 NLDADTTMSRWSFESALRACGSVCEAVDKVIAGDNRNAFCVVRPPGHHAGPRGIVRCDNDPDGGSHGFCFLNNVAIGAAYARSMYRNEGIQKIAIVDFDVHHGNGTEEIIRQLVP 128          
BLAST of mRNA_H-paniculata_contig18421.4526.1 vs. uniprot
Match: A0A7S1UJJ4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJJ4_9STRA)

HSP 1 Score: 171 bits (433), Expect = 1.090e-50
Identity = 83/114 (72.81%), Postives = 96/114 (84.21%), Query Frame = 0
Query:    1 HLDGDTAVSRNSFEAAMFAAGSVCDAIDRVMTGRNRNAFCAVRPPGHHAGPRGLVTCSNDMAGSHGFCLLNNVAIGAAYARCVHRHTGVDRVAIVDFDVHHGNGTEEIVKALVP 114
            HLDGDT +S  ++EAA+ AAGSV + +DRVM+GRNRN FCAVRPPGHHAG RG+VT  ND +GSHGFCLLNNV I AAYAR V+R   VD+VAIVDFDVHHGNGTEE+V+ LVP
Sbjct:  125 HLDGDTVISARTYEAALRAAGSVIEGVDRVMSGRNRNVFCAVRPPGHHAGMRGVVTNDNDDSGSHGFCLLNNVGIAAAYARHVYRGR-VDKVAIVDFDVHHGNGTEEVVRNLVP 237          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18421.4526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMF3_9PHAE1.220e-6390.35Hist_deacetyl domain-containing protein n=2 Tax=Ec... [more]
A0A8J9SU04_PHATR1.730e-5574.56Hypothetical protein (Fragment) n=3 Tax=Phaeodacty... [more]
A0A7S4IZS9_9STRA2.520e-5478.76Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A1Z5J6P1_FISSO9.500e-5377.39Hist_deacetyl domain-containing protein n=2 Tax=Fi... [more]
A0A7S2UJ04_9STRA2.100e-5276.99Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B8C1J3_THAPS7.820e-5274.34Histone deacetylase 1 HDAC Hda1p n=1 Tax=Thalassio... [more]
A0A7S3Q0M5_9STRA9.870e-5272.81Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A7S2QZ77_9STRA8.380e-5174.34Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1E7FPA2_9STRA8.560e-5169.57Arginase/deacetylase n=1 Tax=Fragilariopsis cylind... [more]
A0A7S1UJJ4_9STRA1.090e-5072.81Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037138Histone deacetylase domain superfamilyGENE3D3.40.800.20coord: 1..111
e-value: 2.9E-43
score: 150.1
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 2..110
e-value: 5.1E-33
score: 114.9
NoneNo IPR availablePANTHERPTHR45634FAMILY NOT NAMEDcoord: 2..108
NoneNo IPR availablePANTHERPTHR45634:SF14coord: 2..108
IPR023696Ureohydrolase domain superfamilySUPERFAMILY52768Arginase/deacetylasecoord: 2..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18421contigH-paniculata_contig18421:187..4390 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18421.4526.1mRNA_H-paniculata_contig18421.4526.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18421 187..4390 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18421.4526.1 ID=prot_H-paniculata_contig18421.4526.1|Name=mRNA_H-paniculata_contig18421.4526.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp
HLDGDTAVSRNSFEAAMFAAGSVCDAIDRVMTGRNRNAFCAVRPPGHHAG
PRGLVTCSNDMAGSHGFCLLNNVAIGAAYARCVHRHTGVDRVAIVDFDVH
HGNGTEEIVKALVP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037138His_deacetylse_dom_sf
IPR023801His_deacetylse_dom
IPR023696Ureohydrolase_dom_sf