prot_H-paniculata_contig18412.4521.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18412.4521.1
Unique Nameprot_H-paniculata_contig18412.4521.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length171
Homology
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: A0A061F8M9_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F8M9_THECC)

HSP 1 Score: 104 bits (259), Expect = 7.760e-23
Identity = 52/142 (36.62%), Postives = 85/142 (59.86%), Query Frame = 0
Query:   35 HWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGY---REFPGAVR---RLDKAIYG 170
            HW+ A ++E++ + DNG W+ V+ P+N   +    +YK  ++ DGKVE+YK RLVA G  QI+G  +QE  SP       ++  +LA  Q+W L  +D   A+L   + +E+++E+  GY   RE+P + R   +L K++YG
Sbjct:  171 HWKEAMDIELKALEDNGTWSIVQLPSNYHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQETFSPVARQTIVRMFFALAAAQNWRLSQLDINNAFLNGELTEEVYMELPQGYTFKREYPTSSRLVCKLHKSLYG 312          
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: A0A085LPI1_9BILA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085LPI1_9BILA)

HSP 1 Score: 99.0 bits (245), Expect = 1.660e-22
Identity = 51/160 (31.87%), Postives = 90/160 (56.25%), Query Frame = 0
Query:   11 EELRSDLPVDPKNHRDAQASPEWEHWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGYREFPGAVRRLDKAIYG 170
            +E+   + VD ++  +A +S E + W +A + E + ++    WT+V+ P    ++ +          +GKV++YK RLVA G  Q  G+ + E  +P +     ++ ++LAV  +W +RHVD + AYL   + +EIF+++  GY   PGAV +L + IYG
Sbjct:   67 DEVNFAMFVDARSVNEALSSNEAKEWRKAMDEEYKSLLARQTWTEVQMPKQATLIGS---------NEGKVQRYKARLVAQGFAQKSGVDYHETYAPVVSLTVIRLLMALAVCFNWHIRHVDVKCAYLYGKLTEEIFMKLSEGYEHPPGAVAKLLRPIYG 217          
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: A0A0J7K690_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K690_LASNI)

HSP 1 Score: 99.8 bits (247), Expect = 3.530e-21
Identity = 52/151 (34.44%), Postives = 85/151 (56.29%), Query Frame = 0
Query:   20 DPKNHRDAQASPEWEHWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGYREFPGAVRRLDKAIYG 170
            +P+ + +A AS E E W RA E E   +I N  WT+ + P  +  ++  +++K+  D DGKV +YK RLV  G  Q  GI + E  +P +   S +   SLA  +D+E+   D + A+L   +D+EIF+++     +  G V +L K++YG
Sbjct:  564 EPQTYEEAMASNEVEQWRRAIEEEESALIKNNTWTKTKLPTGRKAITAKIIFKKKRDADGKVHRYKARLVVRGFSQRPGIDYNETYAPVIRYESIRFLFSLAAKEDFEIAQFDIKTAFLNGELDEEIFMQLPTRVTD-AGNVVKLQKSLYG 713          
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: G7E3S6_MIXOS (Integrase catalytic domain-containing protein n=1 Tax=Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) TaxID=764103 RepID=G7E3S6_MIXOS)

HSP 1 Score: 99.8 bits (247), Expect = 3.620e-21
Identity = 54/153 (35.29%), Postives = 90/153 (58.82%), Query Frame = 0
Query:   21 PKNHRDAQASPEWEHWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGYREFPGA---VRRLDKAIYG 170
            P+N ++A ASP+ ++W+ A + E + +  N +W  VE P  +  + T+ ++   +DE G+V +YK RLVA G RQI G+ + E S+      + +  L+LA  +D+EL   D   A+L +P++++I+I+    Y   PG    V +L KAIYG
Sbjct:  764 PRNVKEALASPQADYWKDAMDAEYESMAANKVWELVELPPGRKAIDTLFVFATKVDEKGEVYRYKARLVAKGYRQIPGVDYFETSASVASLPAVRTVLALAASRDYELIQADITSAFLNSPLEEDIYIKQQADYT-VPGQETLVCKLKKAIYG 915          
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 97.8 bits (242), Expect = 1.720e-20
Identity = 57/171 (33.33%), Postives = 92/171 (53.80%), Query Frame = 0
Query:    8 AMPEELRSDLPVDPKNHRDAQASPEWEHWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGYREFPGAVRR--------LDKAIYG 170
            AMP         +P++  +A  SP+W  W++A E EM+ + D+  +  VE P N  ++ +  +++   + +GK+E YK RLVA G  QI GI F +  +P     S +I L+LA   DW++  +D + AYL A +++EIF+      ++ PG  +R        L  AIYG
Sbjct:  947 AMPAAFAVREGQEPRSLEEAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFM------KQPPGQAKRGKEHWVCLLRHAIYG 1111          
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: A0A061DP28_THECC (Integrase catalytic domain-containing protein n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061DP28_THECC)

HSP 1 Score: 97.1 bits (240), Expect = 3.110e-20
Identity = 50/154 (32.47%), Postives = 87/154 (56.49%), Query Frame = 0
Query:   19 VDPKNHRDAQASPEWEHWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGYR--EFPGAVRRLDKAIYG 170
             +P ++ DA      EHW  A + ++  ++ N  W+ V+RP ++ ++    ++KR ++ DG + +YK RLV  G  QI GI FQE  +P     + ++ ++LA    W+L H+D + A+L   +D+EI++E   G+      G V +L KA+YG
Sbjct:  631 TEPNSYEDAAVH---EHWVTAIKEKLNMIVKNKTWSLVDRPKDRQLIGVKWIFKRKLNPDGTLNRYKARLVVKGYSQILGIDFQETFAPVARLDTIRLLIALAAAFQWKLFHLDVKSAFLNGKLDEEIYVEQPPGFELCSGQGKVFKLHKALYG 781          
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: A0A5N6PPX5_9ASTR (Integrase catalytic domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PPX5_9ASTR)

HSP 1 Score: 96.3 bits (238), Expect = 5.900e-20
Identity = 49/150 (32.67%), Postives = 80/150 (53.33%), Query Frame = 0
Query:   23 NHRDAQASPEWEHWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGYRE--FPGAVRRLDKAIYG 170
            N +  +++ +  HW  A   E+  +  N  W  V RP    ++ +  L++     DG +++YK RLVA G  Q+ G+ +    SP + A + ++ LSLAV+ +W+LR +D   A+L   I + +F+E   G+    FP  V  L KAIYG
Sbjct:  895 NPKGVKSASKHSHWIEAMNHELNALYKNDTWVLVPRPATHNVVGSKWLFRTKFRADGSIDRYKARLVAQGYSQVPGLDYSHTFSPVVKATTVRVVLSLAVVNNWKLRQLDVNNAFLHGKITERVFMEQPPGFANPHFPNHVCLLKKAIYG 1044          
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: A0A0C4EU54_PUCT1 (Uncharacterized protein n=1 Tax=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) TaxID=630390 RepID=A0A0C4EU54_PUCT1)

HSP 1 Score: 95.9 bits (237), Expect = 7.900e-20
Identity = 50/166 (30.12%), Postives = 89/166 (53.61%), Query Frame = 0
Query:    5 VALAMPEELRSDLPVDPKNHRDAQASPEWEHWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGYREFPGAVRRLDKAIYG 170
            + L++PE   +D+P     ++ A  SP+ +HW  A + E++ + D G+W   + P    +M+   ++ + +  DG V++YK   VA G  QI G+ + E  +     VS  + L++A + +W +   DF  AYL +PID+++++    G    PG    L KA+YG
Sbjct:  927 ILLSVPEIHAADVP---NTYKQAARSPDKDHWMMAIKEEIENLADLGVWAVEKVPEGTKVMTAKWVFTKKLKADGSVDRYKACFVARGYSQIAGLQYGETFAFTATFVSMCLLLTMAALNNWPVHSFDFVAAYLNSPIDEDLWVIAPEGLSTPPGYACHLKKALYG 1089          
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: A0A061EG83_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061EG83_THECC)

HSP 1 Score: 93.6 bits (231), Expect = 8.310e-20
Identity = 49/139 (35.25%), Postives = 78/139 (56.12%), Query Frame = 0
Query:   34 EHWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGYR--EFPGAVRRLDKAIYG 170
            EHW  A + E+  ++ N  W+ V+RP ++ ++     +KR ++ DG + KYK RLV  G  QI GI FQE  +P     + ++ ++LA    W+  H D + A+L   +D+EI++E   G+      G V RL KA+YG
Sbjct:  161 EHWVTAMKEELNMIVKNKTWSLVDRPKDRQVIGVKWDFKRKLNLDGTLNKYKARLVMKGYSQIPGIDFQETFAPVARLDTIRLLIALAAAFQWKPFHWDIKSAFLNGKLDEEIYVEQPPGFELCSGQGKVYRLHKALYG 299          
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: A0A540MBJ7_MALBA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540MBJ7_MALBA)

HSP 1 Score: 92.8 bits (229), Expect = 1.250e-19
Identity = 50/154 (32.47%), Postives = 90/154 (58.44%), Query Frame = 0
Query:   19 VDPKNHRDAQASPEWEHWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGYRE--FPGAVRRLDKAIYG 170
            ++P +++ A  S +W +  + E V +Q     G W  V  P ++ ++ +  +YK   D+DGKV +YK RLVAHG  Q +G+ + E  S  +   + ++ LSLA ++ WELR +D + A+L   + +E+F++   G+++   P  V +L K++YG
Sbjct:  137 LEPSHYKQAVLSEDWRNAMKEEFVSLQ---KQGTWELVPPPVDRNVIGSKWVYKIKKDQDGKVSRYKARLVAHGYSQEQGLDYDETFSLVVRHTTVRLVLSLAAMKGWELRQLDVKNAFLHGELQEEVFMKQPQGFQDPQHPNHVCKLLKSLYG 287          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A061F8M9_THECC7.760e-2336.62Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
A0A085LPI1_9BILA1.660e-2231.88Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0J7K690_LASNI3.530e-2134.44Retrovirus-related pol polyprotein from transposon... [more]
G7E3S6_MIXOS3.620e-2135.29Integrase catalytic domain-containing protein n=1 ... [more]
A0A401GQU1_9APHY1.720e-2033.33Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A061DP28_THECC3.110e-2032.47Integrase catalytic domain-containing protein n=1 ... [more]
A0A5N6PPX5_9ASTR5.900e-2032.67Integrase catalytic domain-containing protein n=2 ... [more]
A0A0C4EU54_PUCT17.900e-2030.12Uncharacterized protein n=1 Tax=Puccinia triticina... [more]
A0A061EG83_THECC8.310e-2035.25Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
A0A540MBJ7_MALBA1.250e-1932.47Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 52..170
e-value: 5.6E-21
score: 75.3
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 19..169
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 19..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18412contigH-paniculata_contig18412:4127..4639 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18412.4521.1mRNA_H-paniculata_contig18412.4521.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18412 4115..4939 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18412.4521.1 ID=prot_H-paniculata_contig18412.4521.1|Name=mRNA_H-paniculata_contig18412.4521.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=171bp
MAMQVALAMPEELRSDLPVDPKNHRDAQASPEWEHWERAEEVEMQGVIDN
GIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIH
FQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEI
LVGYREFPGAVRRLDKAIYG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like