prot_H-paniculata_contig1841.4517.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1841.4517.1
Unique Nameprot_H-paniculata_contig1841.4517.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length482
Homology
BLAST of mRNA_H-paniculata_contig1841.4517.1 vs. uniprot
Match: D7G1M2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1M2_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 9.220e-78
Identity = 136/214 (63.55%), Postives = 159/214 (74.30%), Query Frame = 0
Query:  265 EVAYDALTYAGLMTAGPFFVSQKDLGFGSPSVILDMDKLACYIAEKILDMDLESWRRRGGDTSV-PNAVGNSRPGVGVEERNFSQDEDSVTHLAALRVQDMTLAAARVALRKIRTEFGASDDIPADASLVVLCSATTNALYLGELLLPRRAMNTLFILDFADSVVPDDEMGKKLRSSDA-GEIANDLGLLPSGRGSVPLVISGDALRAWAAQED 476
             VA  ALTYAGLMTAGPFFVS+KDLGFGSPS++LDMDK+ CY+AEKILD+DL+ WRRRGGD +     VGN++PGVG+EERNFSQDE SV+H AALRVQDMTLAA R ALRK+R E   S D     S+V+L SATTNA +LGELLLP RA+ TL  LDF+  V  D  +G++L   DA G     LGLLP G  S P+VI+GDAL  W  Q D
Sbjct:   12 RVAMTALTYAGLMTAGPFFVSRKDLGFGSPSLVLDMDKMGCYVAEKILDIDLDIWRRRGGDEAAGAGTVGNNKPGVGIEERNFSQDERSVSHSAALRVQDMTLAAGRAALRKLRAELRHSGDGEGSGSVVILASATTNAQHLGELLLPVRAIETLLSLDFSRPVKTDVGLGQQLAVGDAAGAAVEGLGLLPGG--SSPIVITGDALEDWLVQPD 223          
BLAST of mRNA_H-paniculata_contig1841.4517.1 vs. uniprot
Match: D7G1M1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1M1_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 4.900e-49
Identity = 101/166 (60.84%), Postives = 121/166 (72.89%), Query Frame = 0
Query:  119 AAQGEAAAVAGLRELRLQGDDPRASTQSSLKVLVDGVAAAEGQELLITEASVILQRCPRLAEAAEAGTLSAALAAAATSTPRGSSEYLLEGLEREVVGELYTAWFVAVKKWRQKALAVEKYRNTNPTANAAVYTYMVNCCLRQGMWEVAYDALTYAGLMTAGPFFV 284
            AA+GE+ A  GLR LR Q D+   ++Q+   +  D +   +GQELL TEASVILQRCPRLAEAA+AG L A L+++A +   G S++LLE LE+EVV EL T W V+VKKWRQKALAVEKYR+TNPTANA VYTYM NCC RQGMWEVAYD     GL    P F+
Sbjct:   44 AAEGESRA--GLRALRKQIDEGAPASQTIGTIANDVIV--DGQELLTTEASVILQRCPRLAEAAKAGELLAGLSSSANTRAGGESDFLLENLEKEVVAELDTPWDVSVKKWRQKALAVEKYRSTNPTANAVVYTYMTNCCCRQGMWEVAYDG----GLSCLAPRFL 201          
BLAST of mRNA_H-paniculata_contig1841.4517.1 vs. uniprot
Match: A0A835YY85_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY85_9STRA)

HSP 1 Score: 119 bits (299), Expect = 4.430e-27
Identity = 84/238 (35.29%), Postives = 119/238 (50.00%), Query Frame = 0
Query:  195 ATSTPRGSSEYLLEGLEREVVGELYTAWFVAVKKWRQKALAVEKYRNTNPTANAAVYTYMVNCCLRQGMWEVAYDALTYAGLMTAGPFFVSQ-KDLGFGSPSVILDMDKLACYIAEKILDMDLESWRRRGGDTSVPNAVGNSRPGVGVEERNFSQDEDSVTHLAALRVQDMTLAAARVALRKIRTEFGASDDIPADASLVVLCSATTNALYLGELLLPRRAMNTLFILDFADSVVPDD 431
            A + PR S+       E +V G + T     +   + +ALAVEKYR TNP   A +Y+YM N C+ QGM +VA +ALTYAG+  AGPFFV+    LG G+ + +L+ D+++ YIAE                                      Q+++S +H +ALRVQDMTLAA RVALR++  +  A         LV+L S    +  L E+LLP   +  L +LD   +    D
Sbjct:   46 AAAAPRASALLSASLSEEDVFGAVAT-----LDADKSQALAVEKYRCTNPQYVAGIYSYMANTCIYQGMPDVANEALTYAGMPPAGPFFVTAGTKLGDGTTATVLNCDRMSAYIAE--------------------------------------QNDESTSHESALRVQDMTLAAVRVALRQLLPKLQAGGQYEGQ-DLVILASCRRGSQPLQEILLPVNRIKLLLMLDLVPAFTNQD 239          
BLAST of mRNA_H-paniculata_contig1841.4517.1 vs. uniprot
Match: A0A0G4E8S9_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4E8S9_VITBC)

HSP 1 Score: 119 bits (298), Expect = 6.110e-27
Identity = 75/182 (41.21%), Postives = 105/182 (57.69%), Query Frame = 0
Query:  200 RGSSEY-LLEGLEREVVGELYTAWFVAVKKWRQKAL-AVEKYRNTNPTANAAVYTYMVNCCLRQGMWEVAYDALTYAGLMTAGPFFVSQKD-LGFGSPS--VILDMDKLACYIAEKILDMDLESWRRRGGDTSVPNAVGNSRPGVGVEERNFSQDEDSVTHLAALRVQDMTLAAARVALRKI 376
            RGS +  +++G+ REV  E  T W  AV++WR+K   +  KYR TNP   A VYT+MVN  +  G WE A DALTYAGL+ AGPFFV      G  +P    +  +D+LA Y+AE +LD+D+ S +R G            +   G+EE +  Q +++ +   A  V+DM  AAARV LR +
Sbjct:   29 RGSVDATVVDGVLREV--EKPTGWEDAVRRWRRKTQGSAFKYRITNPVGTAGVYTWMVNVLVHHGQWETARDALTYAGLIPAGPFFVKPASAFGLSAPGDPPVYHLDRLALYVAESMLDVDIGSGQRDG-----------EKRVTGLEELHCGQMDEAASVEGAAAVKDMAYAAARVGLRDL 197          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1841.4517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G1M2_ECTSI9.220e-7863.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1M1_ECTSI4.900e-4960.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YY85_9STRA4.430e-2735.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0G4E8S9_VITBC6.110e-2741.21Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..481
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1841contigH-paniculata_contig1841:781..14720 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1841.4517.1mRNA_H-paniculata_contig1841.4517.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1841 431..14756 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1841.4517.1 ID=prot_H-paniculata_contig1841.4517.1|Name=mRNA_H-paniculata_contig1841.4517.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=482bp
MLPAVQKSMRHRSIFLTLGLCRLLIVTVTVLIINTPSSKLCTSDALVVNW
SLSIHDTAAASRALTTANNYRRKSWCSSTGQAHSGCPISMRQAAGTVLMA
NPSAPNDSATSADDVWKCAAQGEAAAVAGLRELRLQGDDPRASTQSSLKV
LVDGVAAAEGQELLITEASVILQRCPRLAEAAEAGTLSAALAAAATSTPR
GSSEYLLEGLEREVVGELYTAWFVAVKKWRQKALAVEKYRNTNPTANAAV
YTYMVNCCLRQGMWEVAYDALTYAGLMTAGPFFVSQKDLGFGSPSVILDM
DKLACYIAEKILDMDLESWRRRGGDTSVPNAVGNSRPGVGVEERNFSQDE
DSVTHLAALRVQDMTLAAARVALRKIRTEFGASDDIPADASLVVLCSATT
NALYLGELLLPRRAMNTLFILDFADSVVPDDEMGKKLRSSDAGEIANDLG
LLPSGRGSVPLVISGDALRAWAAQEDYARVE*
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