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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 471 |
| Cds size | 453 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1841.4518.1 >prot_H-paniculata_contig1841.4518.1 ID=prot_H-paniculata_contig1841.4518.1|Name=mRNA_H-paniculata_contig1841.4518.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp
MSREGSTMIDHRTGDIRHTGQQQQQQQQQQKQQQRATGLTKGGRINQRHD
SYRTETQQLIRAGTNIRGRGDRNPQTALSNDGSGGRVGVYSHGRDMVVQS
GNNSNSISFAENKEGMETSVDSSGSTREGGVTLGVAQELADTIASDWQEF
W back to topmRNA from alignment at H-paniculata_contig1841:16596..19569+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1841.4518.1 ID=mRNA_H-paniculata_contig1841.4518.1|Name=mRNA_H-paniculata_contig1841.4518.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2974bp|location=Sequence derived from alignment at H-paniculata_contig1841:16596..19569+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGACGGCGAAGAGGGAGATGTCGAGAGAGGGTAGCACGATGATTGATCA
CAGGACTGGAGATATTCGTCACACGGGGGTAAGTGTACTACGTAGGGAAA
TTATAGCTATTTGGAGAAGAACATGGTGAATGCTGACCTATTTTCTTGGG
GAGGAGGTTGTTGGTTGAGAGGCGTTAACATTATCCCTTGAAACGATGAT
GGCGGTCGTATATCACGTACCTGCGATATAGTTTGATTCGTTCACACTCT
CTCCTGTAATTTAGCCGTTCTCAATACTACACCCTGCGCGGGAAAACGGT
TAACGAGGTGTAACATGTTCTCTGGTGCACTAAAAGTGACTGGGGTTTCG
TCACCATAACAGAAGAAGCGCAGTAATAGAGATGAAGCACACACATGCAC
GCAGTACAAGGAGTAAATATAGATATGCTCGTCGCCAAATCGGTGCCCTT
ACAACATGTGTACGATTAGAAAAATATTTGAGAAATATTGAAAGCATTGG
GCTGGTGCACATTTTTTTTGACAAAGCGATTCGAGCATTGCAATCCCGAT
ATCGTTTCCAGAAATGGCAGCAAAAAGGCCGTTCTACTCGTCCAATTCTC
CCGTTTTTCCGTTTTCCGGAATTTGGAAATCGCGATAGCCAGCTCCAAAT
CGAGAGAAATGCGCGGGAACACTGTACATCATGTTACCCTCACACGCCTG
GTGCACTTTGGTCACAGTCATCAACTTGTTTAGCTCGCTATCGCGATCTC
TATTTTACGAAAACGGGAAAACGGGGGGGAAATGACAAATATTGCATCAT
TAGACCTAGCTAAACATTGCCGAGCAGACGTAGCGAAAATCATTTTCACA
AAGCGTGTCGAGTCAACTAAATATTGGCGTTCAAAATATGCTGAGACTGT
TGTGGAAAACGTGCCATTTTTATACTTCCACCAGCAGACCCTATCTTAAA
CTTCCAGAGCCGTCCCCAGCTACATCTCAAAATGGGGCTCACCGCCTGAT
CTTTTTGCGTACCGTCGAAGGCAGGGCCTGTTTTAGTATATCAACAGAAC
CAAAAAAAGGACCATCCCTTTAGAATATAATAAATTAGATTCTCAGTCAA
CCTTCAATTTTTCTATGTGGATCGCACTTTCACCGAGACAGCAGCCATCG
ACCAACCTCCCATGTTTCTGTTTCTAAACAATGTTTCCCTCGCGTCGCCG
GTTGTCACCGGGTGCTGGTAGGCCGAACCTTTACCCCCTGGTGTCTCCTC
TCAGATGCTGCTAACATCAAACCAGCACTGGTGCCGTGACGGGAGAAACA
TCTGTCGCACAGATCACACCACTTCATCCTCAAATTGCGAATCGGCATCA
TCTGAGCCCACGCGTAGCAATAACAATAGTGCACCCCACGTTCACGCATG
GGATGCAGCCATGGTTCAACGTCGGGCGTGTCGCAAGCCCGGTGAGAGTG
TAAACCATATACTCCAAGATTAGAGGCTGGGGGAGAGCACACAAAAGTGG
CTTGAGCACCAAATTTGTTAAGCTCGTCAGTAGCACCAAACTTGTGGAGG
CGGTAATAGTGTGTTCAAGCGGTTGCCGGCATGATATTCGGCGGTGGGTT
TCAATCGAGCTGGATCTTACCAGTTTCTGCGTGTCTTGTCACCCCGCGGT
TTAATGTTTGATGTCACGCACAGATATCATAAAGACCCGGCCGAGTTCTT
GTACCAATGATAATAGAATAATGTCCAAAAAATTGTCCACAGTGTTGAAT
TTCGTTTTCGTGCTCAGTAAATAGGTCTTTTTCGTGGATAACTAAAGAAA
CGCAAGAGAAGAGGCAACTCTAGATTAGCCTTGTGAAACCACGCTACCAA
CGTCTGGAACTGCTATAGGCTCAGCTACTGATCAGCTGATGCTGTAATGC
TGCTATGCGTGTCAATAGTGTCTCTCGCGTTACATGTATTCTGCTTGATG
TGAAGCGTGCGCGCCTGAAAATAACCACAAACCGATTTGACCCGCCCGCC
CGGGCTCCGAAACCAACTGCATCTACTTTGTGCCTACTTGTGCAAGCGAA
ACCTCCGAGACCACCAGGCCCACCGCCACCACATATCTTGCTGGAACAAA
AGAAACGGAGGGAAATGATAGCGCAGGTCAGATTACAAAAAATTGGCAGT
AAACTGTAATGTTAGGTAAAGCGCTGCTCGCGATGTTGACGACTTTCATG
TATAGATACAGAGAGGTTGTCGCATGTGTAGATATGGAAATACGATGTAT
ATTTCTCGCATAGTTTCGACCTTAGAACCTCGAAGAAGGTGTGAATAGCG
GCTGGGTGACTGTGAGATACCGCCGCGGAGTCTCTGCAACGAACGACGGA
AATCTGATTCTTACTGCTTCAGCTACTAAAAATGGATGTGTGCCATTTAC
CTTCTGCTGTAATATCCGCAAACGAAGAGAGAGGACAGATCGAAGAAGTC
ACCATACAAGCGCGAACGCAATACCCTTGTTCCAAAACCATGTGCCATCA
ATTGTCGTTAGCCAGACGTCGGTGCCAAATGGTGCTTCCTCGCGACTATC
CCTCTGCACTCCATTGATTGAAAATCAGCAGCAGCAGCAGCAGCAGCAAC
AGCAACAGCAAAAACAACAACAACGGGCTACAGGACTAACAAAAGGAGGC
AGAATTAACCAGCGGCACGACTCGTATCGGACTGAAACACAACAACTGAT
TCGAGCTGGGACCAACATTCGCGGCCGTGGTGACCGTAACCCACAAACAG
CGCTATCAAATGACGGCTCGGGTGGAAGAGTGGGTGTCTATTCTCACGGT
CGAGACATGGTTGTGCAGTCGGGTAACAATAGTAACTCTATATCTTTCGC
CGAAAATAAAGAGGGCATGGAGACGTCGGTGGACTCGAGTGGTTCGACAA
GGGAAGGAGGTGTAACATTGGGGGTCGCGCAAGAACTGGCGGATACAATT
GCTTCTGATTGGCAAGAATTTTGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1841:16596..19569+ >mRNA_H-paniculata_contig1841.4518.1 ID=mRNA_H-paniculata_contig1841.4518.1|Name=mRNA_H-paniculata_contig1841.4518.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=906bp|location=Sequence derived from alignment at H-paniculata_contig1841:16596..19569+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGAGAGAGGGTAGCACGATGATTGATCACAGGACTGGAGATATTCG
TCACACGGGGATGTCGAGAGAGGGTAGCACGATGATTGATCACAGGACTG
GAGATATTCGTCACACGGGGCAGCAGCAGCAGCAGCAACAGCAACAGCAA
AAACAACAACAACGGGCTACAGGACTAACAAAAGGAGGCAGAATTAACCA
GCGGCACGACTCGTATCGGACTGAAACACAACAACTGATTCGAGCTGGGA
CCAACATTCGCGGCCGTGGTGACCGTAACCCACAAACAGCGCTATCAAAT
GACGGCTCGGGTGGAAGAGTGGGTGTCTATTCTCACGGTCGAGACATGGT
TGTGCAGTCGGGTAACAATAGTAACTCTATATCTTTCGCCGAAAATAAAG
AGGGCATGGAGACGTCGGTGGACTCGAGTGGTTCGACAAGGGAAGGAGGT
GTAACATTGGGGGTCGCGCAAGAACTGGCGGATACAATTGCTTCTGATTG
GCAAGAATTTTGGCAGCAGCAGCAGCAGCAACAGCAACAGCAAAAACAAC
AACAACGGGCTACAGGACTAACAAAAGGAGGCAGAATTAACCAGCGGCAC
GACTCGTATCGGACTGAAACACAACAACTGATTCGAGCTGGGACCAACAT
TCGCGGCCGTGGTGACCGTAACCCACAAACAGCGCTATCAAATGACGGCT
CGGGTGGAAGAGTGGGTGTCTATTCTCACGGTCGAGACATGGTTGTGCAG
TCGGGTAACAATAGTAACTCTATATCTTTCGCCGAAAATAAAGAGGGCAT
GGAGACGTCGGTGGACTCGAGTGGTTCGACAAGGGAAGGAGGTGTAACAT
TGGGGGTCGCGCAAGAACTGGCGGATACAATTGCTTCTGATTGGCAAGAA
TTTTGG back to top
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