prot_H-paniculata_contig18407.4516.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18407.4516.1
Unique Nameprot_H-paniculata_contig18407.4516.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length146
Homology
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: D7G2M9_ECTSI (Indole-3-glycerol-phosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2M9_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 1.250e-63
Identity = 105/141 (74.47%), Postives = 118/141 (83.69%), Query Frame = 0
Query:    6 LGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQVLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVAGGGAVGGDSGPELIRSISERVGVPRSMLGWGIRPEHMEID 146
            LGPAL DFMD AT MGTECIVEVHTPAE E ALEHGA VIMVNNWDRITGKLYPKQAK++R++IPDQVLTIA+GGI +  QA  L+DEGYDAVVLGRSLV+G       SGPELIR I +RVGVPRSMLGWG++ E ++ D
Sbjct:  249 LGPALCDFMDAATMMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRITGKLYPKQAKAVRHLIPDQVLTIASGGIDSVEQAGRLTDEGYDAVVLGRSLVSGA------SGPELIRGIVDRVGVPRSMLGWGVKAEDLDYD 383          
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: A0A7S2XXG0_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXG0_9STRA)

HSP 1 Score: 137 bits (345), Expect = 2.300e-38
Identity = 75/143 (52.45%), Postives = 92/143 (64.34%), Query Frame = 0
Query:    4 AQLGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQVLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVAGGGAVGGDSGPELIRSISERVGVPRSMLGWGIRPEHMEID 146
            A LG  L + +D  T MGTECIVEVHT  E E AL  G  +I VNNWDR+TGKLYP QA +L   +P +++T+A GGI TK Q  ELSD GYD V+LGR+L     A   D   + I  I +R GVPR  LGWG+R E ++ D
Sbjct:   21 AVLGADLEECVDAVTAMGTECIVEVHTLNELEHALSLGVSMICVNNWDRVTGKLYPDQALNLCSALPKEIITLATGGIKTKEQCFELSDAGYDGVILGRAL-----AECKDIN-KFIGDIKKRKGVPRKFLGWGLRAEDVDWD 157          
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: A0A7S4DLC8_HETAK (Indole-3-glycerol-phosphate synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DLC8_HETAK)

HSP 1 Score: 134 bits (337), Expect = 3.220e-36
Identity = 75/147 (51.02%), Postives = 92/147 (62.59%), Query Frame = 0
Query:    3 CAQL-GPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQVLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVAGGGAVGGDSGP--ELIRSISERVGVPRSMLGWGIRPEHMEID 146
            CA L GPAL D +D  T MGTE +VEVHT AE + ALE GA +IMVNNWDR+ GKL+  QA  L   IP  +++IAAGGIMT  Q   L D GYD VVLGR+L         DS    +LI+++ +R GV R  LGWG+  +    D
Sbjct:  116 CASLVGPALEDLLDQCTIMGTEALVEVHTEAELDYALEIGANMIMVNNWDRLEGKLHRNQALGLMQKIPPPIISIAAGGIMTPDQCFALQDAGYDGVVLGRAL--------SDSADIKKLIQTVRKREGVERRFLGWGLNGDQFSGD 254          
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: A0A7S2RG86_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RG86_9STRA)

HSP 1 Score: 115 bits (288), Expect = 5.160e-28
Identity = 61/103 (59.22%), Postives = 73/103 (70.87%), Query Frame = 0
Query:    4 AQLGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQVLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVA 106
            AQLGP L    D AT MGTE IVEVHTP EC+ ALE GA ++MVNNWDR  GK +  QA+ +R +IPD V+TIAAGGI +  +A  L+  GYD V LGR+L A
Sbjct:  240 AQLGPLL----DAATIMGTEAIVEVHTPNECDYALELGAMILMVNNWDRTDGKWHRNQAECVREVIPDNVVTIAAGGISSSEEATRLAAIGYDCVCLGRALAA 338          
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: A0A7S2BZD9_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BZD9_9STRA)

HSP 1 Score: 114 bits (285), Expect = 9.660e-28
Identity = 62/131 (47.33%), Postives = 80/131 (61.07%), Query Frame = 0
Query:    6 LGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQVLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVAGGGAVGGDSGPELIRSISERVGVPRSMLGW 136
            +G AL + M+ AT MGTE IVEVHTP E   A++ GA +IMVNNWDR TG  +P QA ++R  IPD ++TIA GG+ +  QA  L+D GYD V LGR+L              L+R+I      P S+ GW
Sbjct:  217 VGQALEELMEAATCMGTEAIVEVHTPNEARNAVDLGASIIMVNNWDRATGTWHPDQALAVRGQIPDHIVTIATGGLASSDQARRLADVGYDCVALGRALAVH------PQPSRLVRNIRAHR-APPSIPGW 340          
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: W7TXI0_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXI0_9STRA)

HSP 1 Score: 107 bits (266), Expect = 7.790e-25
Identity = 61/138 (44.20%), Postives = 77/138 (55.80%), Query Frame = 0
Query:    6 LGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQVLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVAGGGAVGGDSGPELIRSISERVGVPRSMLGWGIRPEHM 143
            +G +L   +D  T +G E +VEVHT AE E ALE GA  I+  NWDRI   LY  QAK L+ MIPD ++ I AG + T   AAEL+D GYDAV+LGR L               I SI  R  +P  + G G+  E +
Sbjct:  231 MGASLSGLLDACTCLGLEALVEVHTVAELEKALELGATNIVATNWDRIENALYKDQAKGLKGMIPDLIVAICAGDVGTVDDAAELADMGYDAVILGRGLATSADIT------RFISSIRSRESMPSLLTGAGMMAEDL 362          
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: A0A7R9W3U1_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W3U1_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.600e-23
Identity = 57/144 (39.58%), Postives = 83/144 (57.64%), Query Frame = 0
Query:    6 LGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQ---VLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVAGGGAVGGDSGPELIRSISERVGVPRSMLGWGIRPEHMEID 146
            LGPAL +F+D AT MG E IVE HT  E + AL+  A  IMV+N+DRI+G+ +  QA  L  M P     ++T+A GGI T  Q  +L   GYD VV+G++++      G    PE I+ + +R  +P  +  WG+     ++D
Sbjct:   30 LGPALENFLDQATCMGLETIVECHTRNEVQAALDALAQNIMVSNYDRISGEYHMDQAYKLAGMFPGSGGPIITLACGGIETTDQMKKLLAVGYDGVVVGKAVM------GSTRAPEFIKCVRDRTLLPAELSQWGLEDVEFDMD 167          
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: A0A7S4KDK2_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KDK2_9STRA)

HSP 1 Score: 103 bits (256), Expect = 3.580e-23
Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = 0
Query:    6 LGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQ---VLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVAGGGAVGGDSGPELIRSISERVGVPRSMLGWGIRPEHMEID 146
            LGPAL +F+D AT MG E IVE HT  E + AL+  A  IMV+N+DRI+G+ +P QA  L  M P     ++T+A GGI T  Q  +L   GYD+VV+G++++      G    PE I+ + +R  +P     WG+     ++D
Sbjct:  259 LGPALENFLDQATCMGLETIVECHTKNEVQAALDALAQNIMVSNYDRISGEYHPDQAYKLAGMFPGSGGPIITLACGGIETTDQMKKLLAVGYDSVVVGKAVM------GSTRAPEFIKCVRDRTLLPAEFSQWGLEDVEFDMD 396          
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: A0A7S3VBR4_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VBR4_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.560e-22
Identity = 60/144 (41.67%), Postives = 83/144 (57.64%), Query Frame = 0
Query:    6 LGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQ---VLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVAGGGAVGGDSGPELIRSISERVGVPRSMLGWGIRPEHMEID 146
            LGPAL +F+D ATT+G E IVE HT  E + AL+  A  +MV+N+DR+  + YP+QA  L  M P     ++ IA GGI        L   GYD VV+G++      A+G    PE IR++ +R  +P  M  WG+  EH+E D
Sbjct:  242 LGPALSNFLDLATTIGLETIVECHTRNEVQAALDALAQNVMVSNYDRLQQRYYPEQAYKLAGMFPGSGGPIICIAGGGIDDTEDMKSLLAVGYDGVVVGKA------AMGSARAPEFIRAVRDRTLLPAEMSQWGL--EHVEFD 377          
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: B8C3Y5_THAPS (Indole-3-glycerol-phosphate synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3Y5_THAPS)

HSP 1 Score: 99.4 bits (246), Expect = 3.850e-22
Identity = 60/144 (41.67%), Postives = 82/144 (56.94%), Query Frame = 0
Query:    6 LGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQ---VLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVAGGGAVGGDSGPELIRSISERVGVPRSMLGWGIRPEHMEID 146
            LGPAL +F++ AT +G E IVE HT  E + AL+  A  IMV+N DRITG+L P QA  L  M P     ++TIA GGI T  Q  +    GYD VV+G++++      G    PE IR++ +R  +P     WG+     +ID
Sbjct:  178 LGPALENFLNLATIIGLETIVECHTYNEVQAALDSLAQNIMVSNRDRITGQLLPDQAIKLAGMFPGSGGPIITIAGGGISTPEQMKKHLAVGYDGVVVGKTVM------GSARAPEFIRTVRDRTLLPAEFSQWGLDDIEFDID 315          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2M9_ECTSI1.250e-6374.47Indole-3-glycerol-phosphate synthase n=1 Tax=Ectoc... [more]
A0A7S2XXG0_9STRA2.300e-3852.45Indole-3-glycerol-phosphate synthase n=1 Tax=Fibro... [more]
A0A7S4DLC8_HETAK3.220e-3651.02Indole-3-glycerol-phosphate synthase n=1 Tax=Heter... [more]
A0A7S2RG86_9STRA5.160e-2859.22Indole-3-glycerol-phosphate synthase n=1 Tax=Rhizo... [more]
A0A7S2BZD9_9STRA9.660e-2847.33Indole-3-glycerol-phosphate synthase n=1 Tax=Dicty... [more]
W7TXI0_9STRA7.790e-2544.20Indole-3-glycerol-phosphate synthase n=1 Tax=Nanno... [more]
A0A7R9W3U1_9STRA1.600e-2339.58Indole-3-glycerol-phosphate synthase n=1 Tax=Pseud... [more]
A0A7S4KDK2_9STRA3.580e-2340.28Indole-3-glycerol-phosphate synthase n=1 Tax=Odont... [more]
A0A7S3VBR4_9STRA1.560e-2241.67Indole-3-glycerol-phosphate synthase n=1 Tax=Chaet... [more]
B8C3Y5_THAPS3.850e-2241.67Indole-3-glycerol-phosphate synthase n=1 Tax=Thala... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013798Indole-3-glycerol phosphate synthasePFAMPF00218IGPScoord: 10..106
e-value: 1.3E-14
score: 54.0
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..110
e-value: 8.5E-27
score: 95.7
NoneNo IPR availablePANTHERPTHR22854:SF2TRYPTOPHAN BIOSYNTHESIS PROTEIN TRPCFcoord: 6..107
NoneNo IPR availablePANTHERPTHR22854TRYPTOPHAN BIOSYNTHESIS PROTEINcoord: 6..107
IPR011060Ribulose-phosphate binding barrelSUPERFAMILY51366Ribulose-phoshate binding barrelcoord: 9..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18407contigH-paniculata_contig18407:354..2891 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18407.4516.1mRNA_H-paniculata_contig18407.4516.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18407 354..2891 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18407.4516.1 ID=prot_H-paniculata_contig18407.4516.1|Name=mRNA_H-paniculata_contig18407.4516.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=146bp
MSCAQLGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNW
DRITGKLYPKQAKSLRYMIPDQVLTIAAGGIMTKAQAAELSDEGYDAVVL
GRSLVAGGGAVGGDSGPELIRSISERVGVPRSMLGWGIRPEHMEID
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013798Indole-3-glycerol_P_synth
IPR013785Aldolase_TIM
IPR011060RibuloseP-bd_barrel