mRNA_H-paniculata_contig18407.4516.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: D7G2M9_ECTSI (Indole-3-glycerol-phosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2M9_ECTSI) HSP 1 Score: 208 bits (529), Expect = 1.250e-63 Identity = 105/141 (74.47%), Postives = 118/141 (83.69%), Query Frame = 1
Query: 16 LGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQVLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVAGGGAVGGDSGPELIRSISERVGVPRSMLGWGIRPEHMEID 438
LGPAL DFMD AT MGTECIVEVHTPAE E ALEHGA VIMVNNWDRITGKLYPKQAK++R++IPDQVLTIA+GGI + QA L+DEGYDAVVLGRSLV+G SGPELIR I +RVGVPRSMLGWG++ E ++ D
Sbjct: 249 LGPALCDFMDAATMMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRITGKLYPKQAKAVRHLIPDQVLTIASGGIDSVEQAGRLTDEGYDAVVLGRSLVSGA------SGPELIRGIVDRVGVPRSMLGWGVKAEDLDYD 383
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: A0A7S2XXG0_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXG0_9STRA) HSP 1 Score: 137 bits (345), Expect = 2.300e-38 Identity = 75/143 (52.45%), Postives = 92/143 (64.34%), Query Frame = 1
Query: 10 AQLGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQVLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVAGGGAVGGDSGPELIRSISERVGVPRSMLGWGIRPEHMEID 438
A LG L + +D T MGTECIVEVHT E E AL G +I VNNWDR+TGKLYP QA +L +P +++T+A GGI TK Q ELSD GYD V+LGR+L A D + I I +R GVPR LGWG+R E ++ D
Sbjct: 21 AVLGADLEECVDAVTAMGTECIVEVHTLNELEHALSLGVSMICVNNWDRVTGKLYPDQALNLCSALPKEIITLATGGIKTKEQCFELSDAGYDGVILGRAL-----AECKDIN-KFIGDIKKRKGVPRKFLGWGLRAEDVDWD 157
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: A0A7S4DLC8_HETAK (Indole-3-glycerol-phosphate synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DLC8_HETAK) HSP 1 Score: 134 bits (337), Expect = 3.220e-36 Identity = 75/147 (51.02%), Postives = 92/147 (62.59%), Query Frame = 1
Query: 7 CAQL-GPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQVLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVAGGGAVGGDSGP--ELIRSISERVGVPRSMLGWGIRPEHMEID 438
CA L GPAL D +D T MGTE +VEVHT AE + ALE GA +IMVNNWDR+ GKL+ QA L IP +++IAAGGIMT Q L D GYD VVLGR+L DS +LI+++ +R GV R LGWG+ + D
Sbjct: 116 CASLVGPALEDLLDQCTIMGTEALVEVHTEAELDYALEIGANMIMVNNWDRLEGKLHRNQALGLMQKIPPPIISIAAGGIMTPDQCFALQDAGYDGVVLGRAL--------SDSADIKKLIQTVRKREGVERRFLGWGLNGDQFSGD 254
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: A0A7S2RG86_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RG86_9STRA) HSP 1 Score: 115 bits (288), Expect = 5.160e-28 Identity = 61/103 (59.22%), Postives = 73/103 (70.87%), Query Frame = 1
Query: 10 AQLGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQVLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVA 318
AQLGP L D AT MGTE IVEVHTP EC+ ALE GA ++MVNNWDR GK + QA+ +R +IPD V+TIAAGGI + +A L+ GYD V LGR+L A
Sbjct: 240 AQLGPLL----DAATIMGTEAIVEVHTPNECDYALELGAMILMVNNWDRTDGKWHRNQAECVREVIPDNVVTIAAGGISSSEEATRLAAIGYDCVCLGRALAA 338
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: A0A7S2BZD9_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BZD9_9STRA) HSP 1 Score: 114 bits (285), Expect = 9.660e-28 Identity = 62/131 (47.33%), Postives = 80/131 (61.07%), Query Frame = 1
Query: 16 LGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQVLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVAGGGAVGGDSGPELIRSISERVGVPRSMLGW 408
+G AL + M+ AT MGTE IVEVHTP E A++ GA +IMVNNWDR TG +P QA ++R IPD ++TIA GG+ + QA L+D GYD V LGR+L L+R+I P S+ GW
Sbjct: 217 VGQALEELMEAATCMGTEAIVEVHTPNEARNAVDLGASIIMVNNWDRATGTWHPDQALAVRGQIPDHIVTIATGGLASSDQARRLADVGYDCVALGRALAVH------PQPSRLVRNIRAHR-APPSIPGW 340
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: W7TXI0_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXI0_9STRA) HSP 1 Score: 107 bits (266), Expect = 7.790e-25 Identity = 61/138 (44.20%), Postives = 77/138 (55.80%), Query Frame = 1
Query: 16 LGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQVLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVAGGGAVGGDSGPELIRSISERVGVPRSMLGWGIRPEHM 429
+G +L +D T +G E +VEVHT AE E ALE GA I+ NWDRI LY QAK L+ MIPD ++ I AG + T AAEL+D GYDAV+LGR L I SI R +P + G G+ E +
Sbjct: 231 MGASLSGLLDACTCLGLEALVEVHTVAELEKALELGATNIVATNWDRIENALYKDQAKGLKGMIPDLIVAICAGDVGTVDDAAELADMGYDAVILGRGLATSADIT------RFISSIRSRESMPSLLTGAGMMAEDL 362
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: A0A7R9W3U1_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W3U1_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.600e-23 Identity = 57/144 (39.58%), Postives = 83/144 (57.64%), Query Frame = 1
Query: 16 LGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQ---VLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVAGGGAVGGDSGPELIRSISERVGVPRSMLGWGIRPEHMEID 438
LGPAL +F+D AT MG E IVE HT E + AL+ A IMV+N+DRI+G+ + QA L M P ++T+A GGI T Q +L GYD VV+G++++ G PE I+ + +R +P + WG+ ++D
Sbjct: 30 LGPALENFLDQATCMGLETIVECHTRNEVQAALDALAQNIMVSNYDRISGEYHMDQAYKLAGMFPGSGGPIITLACGGIETTDQMKKLLAVGYDGVVVGKAVM------GSTRAPEFIKCVRDRTLLPAELSQWGLEDVEFDMD 167
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: A0A7S4KDK2_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KDK2_9STRA) HSP 1 Score: 103 bits (256), Expect = 3.580e-23 Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = 1
Query: 16 LGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQ---VLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVAGGGAVGGDSGPELIRSISERVGVPRSMLGWGIRPEHMEID 438
LGPAL +F+D AT MG E IVE HT E + AL+ A IMV+N+DRI+G+ +P QA L M P ++T+A GGI T Q +L GYD+VV+G++++ G PE I+ + +R +P WG+ ++D
Sbjct: 259 LGPALENFLDQATCMGLETIVECHTKNEVQAALDALAQNIMVSNYDRISGEYHPDQAYKLAGMFPGSGGPIITLACGGIETTDQMKKLLAVGYDSVVVGKAVM------GSTRAPEFIKCVRDRTLLPAEFSQWGLEDVEFDMD 396
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: A0A7S3VBR4_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VBR4_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.560e-22 Identity = 60/144 (41.67%), Postives = 83/144 (57.64%), Query Frame = 1
Query: 16 LGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQ---VLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVAGGGAVGGDSGPELIRSISERVGVPRSMLGWGIRPEHMEID 438
LGPAL +F+D ATT+G E IVE HT E + AL+ A +MV+N+DR+ + YP+QA L M P ++ IA GGI L GYD VV+G++ A+G PE IR++ +R +P M WG+ EH+E D
Sbjct: 242 LGPALSNFLDLATTIGLETIVECHTRNEVQAALDALAQNVMVSNYDRLQQRYYPEQAYKLAGMFPGSGGPIICIAGGGIDDTEDMKSLLAVGYDGVVVGKA------AMGSARAPEFIRAVRDRTLLPAEMSQWGL--EHVEFD 377
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Match: B8C3Y5_THAPS (Indole-3-glycerol-phosphate synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3Y5_THAPS) HSP 1 Score: 99.4 bits (246), Expect = 3.850e-22 Identity = 60/144 (41.67%), Postives = 82/144 (56.94%), Query Frame = 1
Query: 16 LGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWDRITGKLYPKQAKSLRYMIPDQ---VLTIAAGGIMTKAQAAELSDEGYDAVVLGRSLVAGGGAVGGDSGPELIRSISERVGVPRSMLGWGIRPEHMEID 438
LGPAL +F++ AT +G E IVE HT E + AL+ A IMV+N DRITG+L P QA L M P ++TIA GGI T Q + GYD VV+G++++ G PE IR++ +R +P WG+ +ID
Sbjct: 178 LGPALENFLNLATIIGLETIVECHTYNEVQAALDSLAQNIMVSNRDRITGQLLPDQAIKLAGMFPGSGGPIITIAGGGISTPEQMKKHLAVGYDGVVVGKTVM------GSARAPEFIRTVRDRTLLPAEFSQWGLDDIEFDID 315 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18407.4516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18407.4516.1 >prot_H-paniculata_contig18407.4516.1 ID=prot_H-paniculata_contig18407.4516.1|Name=mRNA_H-paniculata_contig18407.4516.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=146bp MSCAQLGPALRDFMDTATTMGTECIVEVHTPAECEIALEHGAGVIMVNNWback to top mRNA from alignment at H-paniculata_contig18407:354..2891+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18407.4516.1 ID=mRNA_H-paniculata_contig18407.4516.1|Name=mRNA_H-paniculata_contig18407.4516.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2538bp|location=Sequence derived from alignment at H-paniculata_contig18407:354..2891+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18407:354..2891+ >mRNA_H-paniculata_contig18407.4516.1 ID=mRNA_H-paniculata_contig18407.4516.1|Name=mRNA_H-paniculata_contig18407.4516.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=876bp|location=Sequence derived from alignment at H-paniculata_contig18407:354..2891+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |