prot_H-paniculata_contig18386.4502.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18386.4502.1
Unique Nameprot_H-paniculata_contig18386.4502.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length117
Homology
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BLAST of mRNA_H-paniculata_contig18386.4502.1 vs. uniprot
Match: D7G3B8_ECTSI (DNA primase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3B8_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 4.320e-18
Identity = 56/87 (64.37%), Postives = 65/87 (74.71%), Query Frame = 0 
Query:    2 GGTAAGQDE------TLDWVFDKRAALRVADTKNTDLVLLEVVMVMLKEQAAARMVALNDELAETSDAIARTMAEAAAAPLL-VDPP 81
            GG   G D+      TLDWVF++  A RVA   NTDLVLLEVVMVMLKEQAAA+M +L+ ELA+TS+AIARTMAEAA A  L +DPP
Sbjct:  916 GGGGVGADDEGEKEDTLDWVFERAEAERVAKGANTDLVLLEVVMVMLKEQAAAKMHSLSLELADTSNAIARTMAEAATADFLALDPP 1002
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BLAST of mRNA_H-paniculata_contig18386.4502.1 vs. uniprot
Match: A0A6H5K157_9PHAE (Toprim domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K157_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 4.330e-18
Identity = 56/87 (64.37%), Postives = 65/87 (74.71%), Query Frame = 0 
Query:    2 GGTAAGQDE------TLDWVFDKRAALRVADTKNTDLVLLEVVMVMLKEQAAARMVALNDELAETSDAIARTMAEAAAAPLL-VDPP 81
            GG   G D+      TLDWVF++  A RVA   NTDLVLLEVVMVMLKEQAAA+M +L+ ELA+TS+AIARTMAEAA A  L +DPP
Sbjct:  818 GGGGVGADDEREREDTLDWVFERAEAERVAKGANTDLVLLEVVMVMLKEQAAAKMHSLSLELADTSNAIARTMAEAATADFLALDPP 904
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18386.4502.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3B8_ECTSI4.320e-1864.37DNA primase n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5K157_9PHAE4.330e-1864.37Toprim domain-containing protein n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 43..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18386contigH-paniculata_contig18386:472..1200 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18386.4502.1mRNA_H-paniculata_contig18386.4502.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18386 472..1204 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18386.4502.1 ID=prot_H-paniculata_contig18386.4502.1|Name=mRNA_H-paniculata_contig18386.4502.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp
MGGTAAGQDETLDWVFDKRAALRVADTKNTDLVLLEVVMVMLKEQAAARM
VALNDELAETSDAIARTMAEAAAAPLLVDPPLPLFLASTDNVAAASAMAG
TSGTDNVDDVMGDAGPP
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