mRNA_H-paniculata_contig1835.4493.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1835.4493.1
Unique NamemRNA_H-paniculata_contig1835.4493.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig1835.4493.1 vs. uniprot
Match: D8LTW2_ECTSI (Queuosine salvage protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTW2_ECTSI)

HSP 1 Score: 563 bits (1450), Expect = 2.290e-195
Identity = 275/330 (83.33%), Postives = 289/330 (87.58%), Query Frame = 1 
Query:  217 DWVPLPAPINPLAAVRRTTAEVMHRAMHVSLNSEAVEQLAKVWATEGGSGGAGVGWNESGWHYSEDAAAGGTLTCQYVFVLDCLNFCFWPTPGLEYEHLAFGLKAAVQRDPLALSADRLASANEDTIRDWFSGFEIPQIAERASKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHHGRQCFFYKRAQILAADLWAAYGRPLPGSGSPYAFEDVGDLTMFADYRVPQILAHLGIMEYDHILAAKIGGGVELPAGSEEEVEIRAACVQAVEGLRIELARRGVSVTSVEIDWRLWHEGERIKKDIAPHHRTLTCFY 1206
            +WVPLP  INPL AVRRTT  V   A HV+LN  A+EQLAK+WAT+GG GGA VGW E+GWHYSEDAA GG LTC YVFVLDCLNFCFWPTPGLEYEHLAFGLKAAVQRDPLALSADRLA A E+TIR WFSGFEIPQI+ERA+KLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDE LH GRQCFFYKRAQILAADLWAAYGRP PGSGS YAFED+G+LTMFADYRVPQ+LAHLG++EY   L  KI G   L  GSEEEVEIRA CVQAVEGLR  LARR V VTSVEIDWRLWHEGERIKKDI PHHRTLTCFY
Sbjct:    8 NWVPLPPAINPLTAVRRTTTTVCSNAQHVALNQAAIEQLAKMWATDGGGGGASVGWEETGWHYSEDAAVGGNLTCTYVFVLDCLNFCFWPTPGLEYEHLAFGLKAAVQRDPLALSADRLAVATEETIRGWFSGFEIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDETLHQGRQCFFYKRAQILAADLWAAYGRPPPGSGSLYAFEDIGELTMFADYRVPQVLAHLGVLEYSQALETKIDGLERLQPGSEEEVEIRAMCVQAVEGLRAALARRNVVVTSVEIDWRLWHEGERIKKDIQPHHRTLTCFY 337
[Close]
BLAST of mRNA_H-paniculata_contig1835.4493.1 vs. uniprot
Match: A0A836CCJ7_9STRA (Queuosine salvage protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCJ7_9STRA)

HSP 1 Score: 345 bits (884), Expect = 2.670e-110
Identity = 179/318 (56.29%), Postives = 218/318 (68.55%), Query Frame = 1 
Query:  268 TTAEVMHRAMHVSLNSEAVEQLAKVWATEGGSGG-----AGVGWNESGWHYSEDAAAGGTLTCQYVFVLDCLNFCFWPTPGLEYEHLAFGLKAAVQRDPLALSADRLASANEDTIRDWFSGFEIPQIAERASKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHHGRQCFFYKRAQILAADLWAAYGRPLPGSGSPYAFEDVGDLTMFADYRVPQILAHLGIMEYDHILAAKIGGGVELPAGSEEEVEIRAACVQAVEGLRIELARRGVSVTSVEIDWRLWHEGERIKKDIAPHHRTLTCFY 1206
            T+A ++  A HV+++ +AV  LA+     GG        +G+GW+  GWHYS DAAA G LTCQ+VFVLD LNFCFWPTPGLEYEHLA GL  A++ DP ALSA  L++A    +  W  GF +PQ+AER SK+RELG VL AHFGG A+ +V  A  SA  L+RL+T LLPGFRDEA++ G Q F YKRAQI+ ADLWAAYG    G+   + F D+ +LTMFADYRVPQ+LAH G + Y   L  +I    ELPAG EEEVEIRAA VQAVE +   +   G  + SVE+DW LWH GE  K  IAPHHRTL+ FY
Sbjct:    5 TSAHIVAAARHVTIDDDAVRALAQELMAAGGVTALQQQQSGMGWSNCGWHYSADAAASGPLTCQFVFVLDALNFCFWPTPGLEYEHLASGLARALEADPRALSAAVLSAATPALLASWAPGFALPQMAERVSKVRELGAVLGAHFGGLASNMVQAAGGSAVNLIRLITALLPGFRDEAVYRGSQVFLYKRAQIVVADLWAAYG--CRGADQLFGFRDMAELTMFADYRVPQVLAHAGALVYAPALRQRIESLQELPAGGEEEVEIRAATVQAVERVAEAMKALGAPLLSVELDWLLWHRGEASKDTIAPHHRTLSIFY 320
[Close]
BLAST of mRNA_H-paniculata_contig1835.4493.1 vs. uniprot
Match: A0A7S0P787_CAFRO (Queuosine salvage protein n=4 Tax=Sar TaxID=2698737 RepID=A0A7S0P787_CAFRO)

HSP 1 Score: 327 bits (837), Expect = 8.060e-103
Identity = 179/337 (53.12%), Postives = 221/337 (65.58%), Query Frame = 1 
Query:  229 LPAPINPLAAVRRTTAEVMHRAMHVSLNSE-----AVEQLAKVWATEG-----GSGGAGVGWNESGWHYSEDAAAGGTLTCQYVFVLDCLNFCFWPTP-GLEYEHLAFGLKAAVQRDPLALSADRLASANEDTIRDWFSGFEIPQIAERASKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHHGRQCFFYKRAQILAADLWAAYGRPLPGSGSPYAFEDVGDLTMFADYRVPQILAHLGIMEYDHILAAKIGGGVELPAGSEEEVEIRAACVQAVEGLRIELARRGVSVTSVEIDWRLWHEGERIKKDIAPHHRTLTCFY 1206
            LPAP++ +  VR TTA VM  A HVSL +E     A  +LA      G     G+    V W+ +GWHY  DA+AGG LTCQYVFVLD LN+CFWP+   +EY+ LA GL+ AV+ DP   SA+RL  A    +R W +  ++P+  ERA  LRELG VL A +GG+AA LV+   +SA RLV LL   LPGFRDE ++ GR+ F YKRAQILAAD+WAAYGR L    SP+AF D+  LTMFADYRVPQ+L  +G++ Y   L A+I    EL  GSEEEVEIRAA VQAVE LR  +   G ++ SVE+DW LW  GER K+ + PHHRT T  Y
Sbjct:   20 LPAPLDIVGRVRSTTARVMEAARHVSLGTEDAFAAAASELAAAATAAGIGAKDGAASTSVDWDAAGWHYCGDASAGGPLTCQYVFVLDSLNWCFWPSATSMEYDALAVGLRKAVEADPSVFSAERLQGATAADVRGWLAPHDVPEAEERAEMLRELGHVLAAEYGGQAANLVSACGQSACRLVALLASRLPGFRDETVYRGRRVFLYKRAQILAADVWAAYGR-LTSGPSPFAFRDMASLTMFADYRVPQLLLPMGVLRYSPALEARIAAQEELCPGSEEEVEIRAASVQAVEKLRHAM---GGTLLSVELDWLLWQRGERSKEKLPPHHRTRTVCY 352
[Close]
BLAST of mRNA_H-paniculata_contig1835.4493.1 vs. uniprot
Match: A0A5D6YCF7_9STRA (Queuosine salvage protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCF7_9STRA)

HSP 1 Score: 314 bits (804), Expect = 2.380e-98
Identity = 167/324 (51.54%), Postives = 209/324 (64.51%), Query Frame = 1 
Query:  241 INPLAAVRRTTAEVMHRAMHVSLNSEAVEQLAKVWATEGGSGGA--GVGWNESGWHYSEDAAAGGTLTCQYVFVLDCLNFCFWPTPGLEYEHLAFGLKAAVQRDPLALSADRLASANEDTIRDWFSGFEIPQIAERASKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHHGRQCFFYKRAQILAADLWAAYGRPLPGSGSPYAFEDVGDLTMFADYRVPQILAHLGIMEYDHILAAKIGGGVELPAGSEEEVEIRAACVQAVEGLRIELARRGVSVTSVEIDWRLWHEGERIKKDIAPHHRTLTCFY 1206
            ++P   VR +TA VM +A HV + +E V++LA V +           V W+   +HY  D A  G LTCQYVFVLD LNFCFWPT  +EYEHLA GLK A+ RDP AL A+RL S + +T+  WF  F  PQ+ ER  K++ELG VLQ  FGG+A  L+ARA  SA   VRL+   LPGFRD+A++ G Q  FYKRAQIL  D+WAAYGR   G  S   F D+  LTMFADYRVPQ+L   G++EY   LA  +    E+P+GSE EVEIRAA +QAVE +  ++   G S+  VE+DW LW  GE  K  + PHHRTLT +Y
Sbjct:    1 MDPTRLVRESTARVMRQATHVKIRAEGVKRLANVLSERLARRETLEAVTWDSGDFHYFADVARDGPLTCQYVFVLDALNFCFWPTEHMEYEHLARGLKDALLRDPHALDAERLVSVSSETLMSWFCPFTPPQVDERKRKIQELGEVLQHGFGGQALNLIARAEGSAVEAVRLVLANLPGFRDQAVYRGEQVHFYKRAQILVGDVWAAYGRRSTGVAS---FHDIAQLTMFADYRVPQVLRPEGVLEYSEPLARLVDSKTEIPSGSEMEVEIRAATIQAVEQIHAQMEELGHSLKVVELDWLLWQIGEGRKDALLPHHRTLTVYY 321
[Close]
BLAST of mRNA_H-paniculata_contig1835.4493.1 vs. uniprot
Match: A0A4D9CUX0_9STRA (Queuosine salvage protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUX0_9STRA)

HSP 1 Score: 316 bits (809), Expect = 3.020e-98
Identity = 181/363 (49.86%), Postives = 218/363 (60.06%), Query Frame = 1 
Query:  247 PLAAVRRTTAEVMHRAMHVSLNSEAVEQLAKVWATEGGSGGAGVGWNESGWHYSEDAAAGGTLTCQYVFVLDCLNFCFWPTPGLEYEHLAFGLKAAVQRDPLALSADRLASANEDTIRDWF----------------------------------------SGFEIPQIAERASKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHHGRQCFFYKRAQILAADLWAAYG-RPLPGSGSPYAFEDVGDLTMFADYRVPQILAHLGIMEYDHILAAKIGGGVELPAGSEEEVEIRAACVQAVEGLRIELARRGVS--VTSVEIDWRLWHEGERIKKDIAPHHRTLTCFY 1206
            PL +VR +TA V+ RA HV ++S A+  L +   T        + W E GWHY  DA   G LTCQY  VLD LNFCFWPTPGLEYEHLA GL+ A++RDP A +A  LAS +  T+  W                                         S F +P ++ER  K+RE+G VL  HF G+AA LV  +  SA  LVRLL+   P FRDEALH G Q +FYKRAQIL AD+WAAYG R  P    PYAF D+G+LTMFADYRVPQIL   G++ Y   LA ++ G  ELPAGSEEEVEIRAA VQAVE +R E+ R G    + SVE+DW LW EGER +  + PHHRTL+ FY
Sbjct:   26 PLTSVRASTARVVRRAQHVHIDSAALAALTRSLTTRQTQP---LAWQELGWHYHADAETAGPLTCQYALVLDALNFCFWPTPGLEYEHLARGLRRALERDPTAFNAQALASVSPATVAGWVDCPSPPSPSHLSTSTPPTGPGPATGARGTSPPSSPASSPPSSF-LPCLSERVRKVREVGHVLLQHFNGQAADLVRASGFSAVELVRLLSAFFPSFRDEALHQGEQVYFYKRAQILVADIWAAYGCRTDPPF--PYAFRDMGELTMFADYRVPQILRGRGVLRYAPGLAERVDGREELPAGSEEEVEIRAATVQAVESMR-EVWRAGGKGEILSVELDWLLWQEGERYRDSLPPHHRTLSIFY 381
[Close]
BLAST of mRNA_H-paniculata_contig1835.4493.1 vs. uniprot
Match: A0A329RBU5_9STRA (Queuosine salvage protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RBU5_9STRA)

HSP 1 Score: 310 bits (794), Expect = 7.080e-97
Identity = 163/323 (50.46%), Postives = 205/323 (63.47%), Query Frame = 1 
Query:  241 INPLAAVRRTTAEVMHRAMHVSLNSEAVEQLAKVWATEGGSGGAGV-GWNESGWHYSEDAAAGGTLTCQYVFVLDCLNFCFWPTPGLEYEHLAFGLKAAVQRDPLALSADRLASANEDTIRDWFSGFEIPQIAERASKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHHGRQCFFYKRAQILAADLWAAYGRPLPGSGSPYAFEDVGDLTMFADYRVPQILAHLGIMEYDHILAAKIGGGVELPAGSEEEVEIRAACVQAVEGLRIELARRGVSVTSVEIDWRLWHEGERIKKDIAPHHRTLTCFY 1206
            ++P   VR +TA V+H A H S++S AVE+LA    T+      GV  W+   +HY ED    G LTCQYVFVLD LNFCFWPT  +EYEHLA GLK A+ RDP  L AD LA    +T+  WF  F  PQ+ ER  K+RE+G VLQ  F G+A  L+ +A  SA   +RL+    PGFRD AL+ G Q  FYKRAQIL  D+WAAYGR   G  S   F D+G LTMFADYRVPQ+L   G++ Y   LA  +    E+PAGSE E+EIRAA +QAVE +  ++  RG  +  +E+DW LW  GE  K+D+ PHHRT + +Y
Sbjct:    1 MDPTTLVRESTARVVHCASHTSIDSAAVERLADKLGTKLSKDDRGVVTWDSGDFHYFEDVKQNGPLTCQYVFVLDALNFCFWPTQYMEYEHLARGLKTALLRDPHVLDADNLAMVTNETVTSWFHPFTPPQLDERRRKVREVGEVLQKFFDGQALNLIKKANFSAVEAIRLVLAYFPGFRDHALYKGEQVHFYKRAQILVGDVWAAYGRRTSGIAS---FHDIGKLTMFADYRVPQVLRPEGVLVYSSKLAELVDNKAEIPAGSEMELEIRAATIQAVEQIHKQMINRGHHLEVIELDWLLWQIGEDNKEDLLPHHRTWSIYY 320
[Close]
BLAST of mRNA_H-paniculata_contig1835.4493.1 vs. uniprot
Match: A0A0P1A8J2_PLAHL (Queuosine salvage protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8J2_PLAHL)

HSP 1 Score: 302 bits (773), Expect = 9.370e-94
Identity = 160/323 (49.54%), Postives = 209/323 (64.71%), Query Frame = 1 
Query:  241 INPLAAVRRTTAEVMHRAMHVSLNSEAVEQLA-KVWATEGGSGGAGVGWNESGWHYSEDAAAGGTLTCQYVFVLDCLNFCFWPTPGLEYEHLAFGLKAAVQRDPLALSADRLASANEDTIRDWFSGFEIPQIAERASKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHHGRQCFFYKRAQILAADLWAAYGRPLPGSGSPYAFEDVGDLTMFADYRVPQILAHLGIMEYDHILAAKIGGGVELPAGSEEEVEIRAACVQAVEGLRIELARRGVSVTSVEIDWRLWHEGERIKKDIAPHHRTLTCFY 1206
            ++P A+VR +TA VM RA  V ++  A+E+ + K+     G+    V W+    HY ED    G LTCQYVFVLD LNFCFWPT  +EYEHLA GLKAA+ RDP AL A+ LA+  ++T+  WFS +  PQ+ ER  K++E+G VL  HF G+A  L+  A  SA   +RL+     GF+D AL+ G Q  FYKRAQIL  D+WAAYGR   G  S   F D+G LTMFADYRVPQ+L    ++ Y   LA  + G VE+P+GSE EVEIRAA +QAVE +  +L  +G  +  +E+DW LW  GE+ KKD+ PHHRT + +Y
Sbjct:    1 MDPTASVRESTARVMQRAKFVRIDRAAIERFSTKLEMKLNGNELDVVTWDSGNCHYFEDNKENGPLTCQYVFVLDALNFCFWPTKDMEYEHLARGLKAALLRDPHALDAENLANVTKETVASWFSPYTPPQLDERQRKVQEVGVVLLKHFDGKALNLIKSARCSAVEAIRLVLAYFSGFQDHALYKGEQVHFYKRAQILVGDVWAAYGRRTSGITS---FHDIGKLTMFADYRVPQVLRSDCVIHYSPELAQIVDGKVEIPSGSEMEVEIRAATIQAVEQIHQQLISKGYCLHIIELDWLLWQIGEKNKKDLLPHHRTWSIYY 320
[Close]
BLAST of mRNA_H-paniculata_contig1835.4493.1 vs. uniprot
Match: W2PI80_PHYPN (Queuosine salvage protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2PI80_PHYPN)

HSP 1 Score: 301 bits (770), Expect = 2.610e-93
Identity = 160/323 (49.54%), Postives = 207/323 (64.09%), Query Frame = 1 
Query:  241 INPLAAVRRTTAEVMHRAMHVSLNSEAVEQLA-KVWATEGGSGGAGVGWNESGWHYSEDAAAGGTLTCQYVFVLDCLNFCFWPTPGLEYEHLAFGLKAAVQRDPLALSADRLASANEDTIRDWFSGFEIPQIAERASKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHHGRQCFFYKRAQILAADLWAAYGRPLPGSGSPYAFEDVGDLTMFADYRVPQILAHLGIMEYDHILAAKIGGGVELPAGSEEEVEIRAACVQAVEGLRIELARRGVSVTSVEIDWRLWHEGERIKKDIAPHHRTLTCFY 1206
            ++P A VR +TA ++ RA HVS++S AV +LA K+ A   G     V W+   +HY ED    G LTCQYVFVLD LNFCFWPT  +EYEHLA GLK A+ RDP AL A+ LA+   +T+  WF  F  PQ+ ER  K+RE+G VLQ  F G+A  L+ +A  SA   VRL+    PGFRD A++ G Q  FYKRAQIL  D+WAAYGR   G  S   F D+G LTMFADYRVPQ+L    ++ Y   LA  +    E+PAGSE E+EIRAA +QAVE +  ++  +G  +  +E+DW LW  GE  K+ + P+HRT + +Y
Sbjct:    1 MDPTALVRESTARIVQRAGHVSIDSGAVGRLAAKLSARLSGDEHGAVTWDSGDFHYFEDVTQDGPLTCQYVFVLDALNFCFWPTENMEYEHLARGLKTALLRDPHALDANNLATVANETVASWFHPFTPPQLDERRRKVREVGDVLQQFFDGQALNLIKKANFSAVEAVRLVLAYFPGFRDHAVYKGEQVHFYKRAQILVGDVWAAYGRRTSGIAS---FHDIGKLTMFADYRVPQVLRPESVLVYSSELAQLVDNKAEIPAGSEMELEIRAATIQAVELIHEQMIIKGHHLEVIELDWLLWQIGEDNKEHLLPYHRTWSIYY 320
[Close]
BLAST of mRNA_H-paniculata_contig1835.4493.1 vs. uniprot
Match: D0N617_PHYIT (Queuosine salvage protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N617_PHYIT)

HSP 1 Score: 299 bits (766), Expect = 1.030e-92
Identity = 157/323 (48.61%), Postives = 202/323 (62.54%), Query Frame = 1 
Query:  241 INPLAAVRRTTAEVMHRAMHVSLNSEAVEQLAKVWATEGGSGGAGV-GWNESGWHYSEDAAAGGTLTCQYVFVLDCLNFCFWPTPGLEYEHLAFGLKAAVQRDPLALSADRLASANEDTIRDWFSGFEIPQIAERASKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHHGRQCFFYKRAQILAADLWAAYGRPLPGSGSPYAFEDVGDLTMFADYRVPQILAHLGIMEYDHILAAKIGGGVELPAGSEEEVEIRAACVQAVEGLRIELARRGVSVTSVEIDWRLWHEGERIKKDIAPHHRTLTCFY 1206
            ++P A VR + A V+ RA HV++ S AVE LA   +     G  GV  W+   +HY ED    G +TCQYVFVLD LNFCFWPT  +EYEHLA GLK  +  DP AL A+ LA    D +  WF  F  PQ+ ER  K+RE+G VL   F G+A  L+ +A  SA   +RL+    PGFRD A++ G Q  FYKRAQIL  D+WAAYGR   G+ S   F D+G LTMFADYRVPQ+L   G++ Y   LA  +    E+PAGSE E+EIRAA +QAVE +  ++  +G  +  +E+DW LW  GE  K+D+ PHHRT + +Y
Sbjct:    1 MDPTALVRESIARVVQRANHVNIGSAAVECLAAKLSARLSEGDQGVVTWDSGDFHYFEDVKQDGPVTCQYVFVLDALNFCFWPTENMEYEHLARGLKTTLLHDPHALDAENLAKVTNDMVASWFHPFTPPQLDERRRKVREVGEVLLQFFDGQALNLIKKANCSAVEAIRLVLAYFPGFRDHAVYKGEQVHFYKRAQILVGDVWAAYGRQTSGAAS---FHDIGKLTMFADYRVPQVLRPEGVLVYSAELAKLVDSKAEIPAGSEMELEIRAATIQAVELIHKQMVTKGHRLKVIELDWLLWQIGEDNKEDLLPHHRTWSIYY 320
[Close]
BLAST of mRNA_H-paniculata_contig1835.4493.1 vs. uniprot
Match: A0A0M8K9E5_9CHLR (Uncharacterized protein n=2 Tax=Ardenticatenia TaxID=1382928 RepID=A0A0M8K9E5_9CHLR)

HSP 1 Score: 299 bits (765), Expect = 1.040e-92
Identity = 166/321 (51.71%), Postives = 206/321 (64.17%), Query Frame = 1 
Query:  244 NPLAAVRRTTAEVMHRAMHVSLNSEAVEQLAKVWATEGGSGGAGVGWNESGWHYSEDAAAGGTLTCQYVFVLDCLNFCFWPTPGLEYEHLAFGLKAAVQRDPLALSADRLASANEDTIRDWFSGFEIPQIAERASKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHHGRQCFFYKRAQILAADLWAAYGRPLPGSGSPYAFEDVGDLTMFADYRVPQILAHLGIMEYDHILAAKIGGGVELPAGSEEEVEIRAACVQAVEGLRIELARRGVSVTSVEIDWRLWHEGERIKKDIAPHHRTLTCFY 1206
            NPL +VR TTA V  RA HV L  +A+  LA+    +GG        N+S W  +   A G   T QY+ VLD LNFCFWP PGLEYEHLA GLK A++ DP    A+RL     D +R W  G E+PQ+ ER   +RE+G  L AHFGG+AA LV+ A  SAARLV LLT   PGFRD A++ GRQ FFYKRAQI AAD+W A+     G+G    F+DV ++TMFADYRVPQ L   G++ Y   LA K+    E+  GS EE+EIRAA VQAVE LR  LA+RG  V +V++DW LW   E +++ + PHHRTLT +Y
Sbjct:    4 NPLHSVRETTAWVAERARHVHLLPDALTVLAESLVADGGV-------NQS-WDRTPHFADGTPRTVQYLLVLDALNFCFWPKPGLEYEHLALGLKRAIEADPHVFDAERLVQVEADDLRRWV-GAELPQMEERVRLVREVGAGLLAHFGGQAANLVSAADHSAARLVSLLTAHFPGFRDHAVYDGRQVFFYKRAQIFAADVWGAFN----GAGLG-RFDDVHEMTMFADYRVPQYLRARGVLVYAPPLAEKVDARQEIAPGSPEEIEIRAATVQAVEHLRSLLAQRGYDVPAVQVDWLLWERAEAVRESLPPHHRTLTIYY 310
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1835.4493.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTW2_ECTSI2.290e-19583.33Queuosine salvage protein n=2 Tax=Ectocarpus TaxID... [more]
A0A836CCJ7_9STRA2.670e-11056.29Queuosine salvage protein n=1 Tax=Tribonema minus ... [more]
A0A7S0P787_CAFRO8.060e-10353.12Queuosine salvage protein n=4 Tax=Sar TaxID=269873... [more]
A0A5D6YCF7_9STRA2.380e-9851.54Queuosine salvage protein n=1 Tax=Pythium brassicu... [more]
A0A4D9CUX0_9STRA3.020e-9849.86Queuosine salvage protein n=1 Tax=Nannochloropsis ... [more]
A0A329RBU5_9STRA7.080e-9750.46Queuosine salvage protein n=2 Tax=Phytophthora Tax... [more]
A0A0P1A8J2_PLAHL9.370e-9449.54Queuosine salvage protein n=1 Tax=Plasmopara halst... [more]
W2PI80_PHYPN2.610e-9349.54Queuosine salvage protein n=13 Tax=Phytophthora Ta... [more]
D0N617_PHYIT1.030e-9248.61Queuosine salvage protein n=2 Tax=Phytophthora inf... [more]
A0A0M8K9E5_9CHLR1.040e-9251.71Uncharacterized protein n=2 Tax=Ardenticatenia Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1835contigH-paniculata_contig1835:9271..20140 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score571.2
Seed ortholog evalue3.1e-160
Seed eggNOG ortholog2880.D8LTW2
Preferred nameC9orf64
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008477,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016798,GO:0016799,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0101030,GO:1901360
EggNOG free text desc.Chromosome 9 open reading frame 64
EggNOG OGsKOG2524@1,KOG2524@2759
Ec32 ortholog descriptionProtein of unknown function DUF2419
Ec32 orthologEc-12_004090.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size2037
Cds size996
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929424.0151172-UTR-H-paniculata_contig1835:9270..93241622929424.0151172-UTR-H-paniculata_contig1835:9270..9324Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1835 9271..9324 +
1691480855.1481776-UTR-H-paniculata_contig1835:9270..93241691480855.1481776-UTR-H-paniculata_contig1835:9270..9324Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1835 9271..9324 +
1622929424.031031-UTR-H-paniculata_contig1835:10269..104281622929424.031031-UTR-H-paniculata_contig1835:10269..10428Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1835 10270..10428 +
1691480855.1600406-UTR-H-paniculata_contig1835:10269..104281691480855.1600406-UTR-H-paniculata_contig1835:10269..10428Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1835 10270..10428 +
1622929424.1123824-UTR-H-paniculata_contig1835:19312..201401622929424.1123824-UTR-H-paniculata_contig1835:19312..20140Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1835 19313..20140 +
1691480855.2047596-UTR-H-paniculata_contig1835:19312..201401691480855.2047596-UTR-H-paniculata_contig1835:19312..20140Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1835 19313..20140 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929424.0476327-CDS-H-paniculata_contig1835:10428..105881622929424.0476327-CDS-H-paniculata_contig1835:10428..10588Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1835 10429..10588 +
1691480855.171675-CDS-H-paniculata_contig1835:10428..105881691480855.171675-CDS-H-paniculata_contig1835:10428..10588Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1835 10429..10588 +
1622929424.067763-CDS-H-paniculata_contig1835:10831..109181622929424.067763-CDS-H-paniculata_contig1835:10831..10918Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1835 10832..10918 +
1691480855.1794515-CDS-H-paniculata_contig1835:10831..109181691480855.1794515-CDS-H-paniculata_contig1835:10831..10918Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1835 10832..10918 +
1622929424.0877752-CDS-H-paniculata_contig1835:17579..181571622929424.0877752-CDS-H-paniculata_contig1835:17579..18157Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1835 17580..18157 +
1691480855.1868012-CDS-H-paniculata_contig1835:17579..181571691480855.1868012-CDS-H-paniculata_contig1835:17579..18157Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1835 17580..18157 +
1622929424.1008565-CDS-H-paniculata_contig1835:19141..193121622929424.1008565-CDS-H-paniculata_contig1835:19141..19312Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1835 19142..19312 +
1691480855.1947963-CDS-H-paniculata_contig1835:19141..193121691480855.1947963-CDS-H-paniculata_contig1835:19141..19312Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1835 19142..19312 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1835.4493.1prot_H-paniculata_contig1835.4493.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1835 10429..19312 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1835.4493.1

>prot_H-paniculata_contig1835.4493.1 ID=prot_H-paniculata_contig1835.4493.1|Name=mRNA_H-paniculata_contig1835.4493.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=332bp
MDWVPLPAPINPLAAVRRTTAEVMHRAMHVSLNSEAVEQLAKVWATEGGS
GGAGVGWNESGWHYSEDAAAGGTLTCQYVFVLDCLNFCFWPTPGLEYEHL
AFGLKAAVQRDPLALSADRLASANEDTIRDWFSGFEIPQIAERASKLREL
GCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHHGRQCFF
YKRAQILAADLWAAYGRPLPGSGSPYAFEDVGDLTMFADYRVPQILAHLG
IMEYDHILAAKIGGGVELPAGSEEEVEIRAACVQAVEGLRIELARRGVSV
TSVEIDWRLWHEGERIKKDIAPHHRTLTCFY*
back to top

mRNA from alignment at H-paniculata_contig1835:9271..20140+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1835.4493.1 ID=mRNA_H-paniculata_contig1835.4493.1|Name=mRNA_H-paniculata_contig1835.4493.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10870bp|location=Sequence derived from alignment at H-paniculata_contig1835:9271..20140+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAACGTTGTATCTGGTACAGGAACCTCAAGATGGTGCTGTTGACAACATC
GAGGGTGAGGTTGCTGGCACCACATTGACAATGTGGTGTAACGTACCCCA
GAGCCCACTTGTGTTCATAGTTTCTGCCCTGACTACTTGTATCCACAGAT
CGACTAGACAATGAAAAGTTTAGGGCGGCAGCAGCGCATTCTTGTGCTTC
GTCCAGAACGACAACAGAAATAGTACAGTAGTAGTCAGGAGCCTTCGGTG
GAGCTTTTGACCATTTTACCCCTACATTCCGATATTCCGACCAAAATAAC
TCATTAACTGTTGCTGGTTCACAATAATGATGAGAATGAAGAGCAGTGAA
GGCAGTGCGATGAAGACAGAAGAAGGTAATTTGTGCACAAACCTCTATGC
ATGTATGTAACACCATGTAACACCAACGACACACAAGCCAAGCAAGGCGC
ATGCTATACAGCCGGATTACTGTATTATCTCTTTTCACCAGGCAGGTTGT
TACGTGCTTCGATAAAAAGATGCTGCGTACCTACATTTAGAAGTAAATAA
TACGTTCACGTTCCCTCTGGCTGTGTAGACAGATATATTATAGGCAGCCA
TCTACGTATCTATCATCTATCTGCCTAATGAAAAAATACTCTGTCCGCCA
ACTTTGAACATCAACCCCCACAACACGCACGCAGAACCTGCAACGCAAAC
GAATCACTGTATCGCAATGTTGTGCAAACGGCATACTTTTCCACCACCTG
GGCCGTTGCCGCTTCTCCCCAGTAGGCAGGTGAAATTTATCACCTACGTA
ATCAGTACAACATCTATGCTGTGTAGATGCTGCCGCCTACGCTGTCTGCC
AGGTGGATCCCTGAACATTAAGGCTACAATAATTTTTTCGCGGGACATAA
TCCCCATCTGATGTTCCACACACCATATAATAACTATTTTAAAACGTTCA
CTGTATCCCCTATAACTATATTTTTTGGTTTTTGCACGCGAGGAAAAAGG
TCGTTGACGCACCCACCACCACATGGACGTTTTGACATTGCAATCATCTC
CTGGAGAATCACAAAAAGGATCGGCAGCAGAGGCTTTTCATACCGGAAAG
CTCCGCGCAGGCCACAGAGACAATATACACGTCACAAGTAGGGCGAACAC
AAGGAACCATGGACTGGGTTCCGCTGCCGGCGCCGATCAACCCCCTCGCA
GCAGTGCGGCGGACGACAGCTGAGGTAATGCACCGGGCGATGCATGTGTC
TCTCAACAGTGAGGCAGTGGAGCAACTCGCTAAAGTGTGGGCAACGGAGG
GTGGAAGCGGAGGCGCAGGTAAACTGCTTGCTGAGGGTACCTAGGTGTAT
TTTCACTTCGTTTCAAATATGGTAGCTCGTTTGCTCATTCCCCGATCTAC
GTACACACATACATGTGTGCGTGCGAAACAAAAGTCGGGTATCAAGGACC
GCCGGTTACGATTGGTTTGCTGGCATTTGATCTCTGGGATCTCTGATGGA
TCTATTGCTTTCCTCTGCTGACATTCATCGCTGACGCCACTTTTTGCTTG
GTTTGGAGTAGGTGTCGGGTGGAATGAGTCCGGCTGGCACTATTCGGAAG
ACGCTGCTGCTGGCGGGACGTTGACATGCCAATATGTTTTTGTACTCGGT
AAGAACACCCTGCCTTGGTGTTGTTCACGAGGCTTGAGTGGGTTGGTGGG
TGGGTAGATGATGTCTTGTGCAAACGATGCCACAACCTTCAAACCTTTCA
AACACCAAACATTTCCGTTTCCTTGCCTGTATTTGCAACGGACGGAGATC
TAGAAATCGGACGATCGAAACAAGTGTATTCAAGTTTTCCTTGCAAGAGC
GTGAATAATGGGCGATAGCTGTTGGTACGACCACAGTGCACTATGGTACT
GTCGACTGTCTCTGTGACACCGTGATTGTGGTGTGTGCTTTCTTTATTTT
GTCAGTGTGGATTAACTTGGAGCTTCAATAGAATATGGCACTAACTTGAG
CGTTTCCTCTTTCAACTTAGAGTTGGACAACAAAAACATCTACGGTAAAT
GTTATATATAACAGGATATCCGAGAGATAGCTGCTGAGCTATGTTGGCAG
CTGCCTTCGCTTCATCACCACGAGGTTTTTGTGTGGCCCATCTATTTTTA
AGGTTCTATAAAATAGGAAATCACCGCCCATGTCTTTGAGGGATATTTCG
TGCTGATAAGCTGGGTTCACCACCCCCGCCCCAGCTCACTGTCCCGGACC
TCGCTGCAGCACATCGATACATACAACTCGGGTTTGAAACTTTTCCTCTT
TGTTTTTGGGTAGGGTTGATGTTTTGATGTTTCCAGTCTACATGTTTCTG
ACGTAAACAGACAATTGTAGGACAGTGATCGAGTTGAAATTTTTCCAATT
TGTGTTCATGGTTGGTGTTTTCTCATTCTACAGACAGTAGTTTCTGACGT
ATGATACAGCAATCATGACACCTGCTCTCCTCTTCGAGGTTCATACATTT
GGAATAACCTGTCTTGTGGCCGGGTGCATCAGCACACGCGCCCCATCTCC
AACGTATACCACCCAAGGGACAGGCATCATTAGTCACCCAGTAGCGCAGG
GCTAGCTTTAGGGACGGGCTGGCCTTTTAGTTTCTTGTTGTTGGCATTTT
GGCCTCAGATGTGTTCCAATTCAATTGGGTACCACACATTGCATGAACCA
ACGACACACGGGAAGACCGAACGACTCCACTTTCTAGGCGCCGAAGAGTA
TTTCGGAACAAAAATCATGAACAGATTTTTTGCGGAGTTGCGGTCCTCGT
GCTTTGAAGCATGACAATTCCCATGACAACTCCCTGTTTCTGAGGTACAC
ATTGCAAGAGTAAAGTGCCTGTTAGAGCAGCGGAGGTTCGGTGTCTTGGT
TATCATGTAACCATAGGTGTTGTTCTTTCCTGTTGTTTCAGGTGCGGGTG
CTCCGGAAGGGTAACCATGGACTCGAGAGTGGAGCCTCCCTTGTCCTCTC
ACCCCCAAGTGTCGCTTGATTTTTATTCTGCAGCTCAAAAGAGAGCAGCA
AAGAATTGATCCTCCGCGACACAGTTTGTTCGTGAAAAATGACAAGAACA
GATCTCTCAGAGCATCATTTTCACATCCTGTAACATTGTTACAGATTATT
GTTACGTTAGAGTTCTTGTCCGGGTCAGACCTGAAACACACAAGCGGAAA
GTACATACGGTAATCACCACTACCCCAACCTAACAACATGATAGTGTAGG
TCGCGCAGTCCACGTTGTCATGCTATTGTGTTCAGTCTGTATGCTGAATA
TCGTTATCCGAGGGTGTGCGTATAGTATTTTTGCCCTGTTGGGCCCTGTC
TTATTGAGGAACGCGAAAACATTTTTTTTTTAATTCTTGCTTGAGAAACA
AGTTGTGTCTATAGACGTCGAACTTTGCTCTGAAGATGACTGTTACCCAT
GGTTCAGTAGCGAGGATACAAAATGGAGAAGACTTGGAATACACCACAAG
CGCAGGTATTCCCAGAACAACACGCACAGAGGTACAGAGTACGCGCGCAC
TAAATTGAGCTCGGGCATTAGACCTCGTTCAGCTGGATACGCCAGCCTTT
GGCGCGAATCCATTCTGTGTTGAGGGAGTTACAGCATTTTATGTCCAGTT
GCAATGACGAGTGCAATTTTGGCTTTTTCCTCCGCGTGCCAGACTTGCCC
CGGCGCGCACGAAACACCTGCTCTCCTTCAAATCTGGATTTGTTCTACCC
CAAACAAGTACATAATGTTCAGTTAATCAAGAGCTATGACCCGATCTATG
TTTCCTTGTTCCGGGGGCAGTGAAGCTTTCACTCCCACGACGGGTAATGC
TGTTTTTCTTTGTCGCCCGTTTGCGATTCGTCGCTTTTGGTCGATATCTC
GAGCCCTTGGTCCTGCTTGGTTGCCATATTATTATTTTAAGCGTTCCAAT
CACAGGCATACTCGTATCCATTTTGGTGTCCGCAACAACCCTTTCCTCTT
GTAAAACGTTCTGGGGACTTGAATGAAAACGCCGGGATGGTGTTTGTACA
TGAAACTGAAAAATCTCTACGATTGGTCAAAGGCTCAGTTGACCAATCAC
AGAGCAATTTCGTTTCTCAGTTCTTTGGCAAGACCCAGCCATGGGCCGTC
TATTAACGAAGTTCACGAAAACGAAAACGAAAAAGAAAAAGAAAAAATTG
AATGTGCTCCTGGTTCTGGGATTGGTCTGTGCTCCTACGATCACCCCAAG
AAGTTGGGAAAACTGAAGGTTTGATATCGTATCTAGATGAAAAATAAGTC
CCGGAGGAAATCCTTTTGTCGAAATTGAAAGAGGGTGATCAAATCTAACT
CCTTCGGGAACAACGTTAGCGATCAGAATAATGAATCGAGAAGGGCGATA
GAGGATGTGTGAGAGTTTCACTCCTCTGAGTACACCTAAACGTAGCTCGT
GCTCTAGCTCTCAATCAATTGAGCATGATGTACGTGGTGTGGATTGAATA
CGGTCCAAACTGATGGAAGAGTCAACATTTGGTGTGCGTCACCGCCAAGT
CTGACACAGACGATTTGTCACTAAGGATGAAAAACGACACGTTATTGTGA
TGCCAGCGCCACGCAAGGTATTGTGGCTCCCCCAGCACTGAACCGATTTC
CGTTAAACAAAGCCTGGCGCGGTTAACTTTGCTGGGGCCAACGACCGGTT
CTAAGATGCGAAAACGTTCGCCGTGTGTCTGTGAAGCCATGTGTCGTTAG
TACTAGGGCGTACTAACGGGCGAAAAAAAAAAGAGAAAAGAAAAAAATTA
TGTGATTGGCCAGGTTGCACCCTGGGATATTCGATTTCATACTTCGATTC
TGGAAAGTCTTTTAAGATTTTTTAAAAATGAAGCAAGCACAGGCAGATCG
AACGAATACAGGAGCAAGCTGACGATCAAGGCCATGGAGTTGATCGGACG
ACTAATCAACTCGGCATAAACGGGAGAGTGTCACTGCCCCTGATAGTACC
GAACGTAGCTCGAGCCGTAGTTCTTTATATGAACTATTACGGAGGAACAT
AATAATCAGGAGCAAATTAGAAAATTGACATTTTGAGGTGTAACTCATGC
AATACGATATGCACCAATCGGTTGCTGCATGCCTGTGCAAGTGTTTTTAG
AGTGTGTATTTGTTTTCAGCTAGAAGCGGAAATCTGTAGACCAACGGGGA
AAAACAAAATTCAGTTTCCGAAAAACCAAAAAAAATGCTCCTGATTATTG
TGTTCCTCCGTAATAGCAGGAAATATTTCGTCAGGGCTTTGTCCGTTCCA
AATTGACGGAGAGCTCATGTTTTTGTGCCTCGACGCCAAGGCAGGTACAA
ACAAGTGGCTCGTTTTGTGTTTCGAATTTGGCCCAATTGTTCGATTAATA
ACTTCCCCAGTACGAACCAGATTCCCGTCAAATGAAGCCTAATATGTGCA
GCTGCGCACGGCCTATCGTCCCAGTTAGTTAATACATATATCGTGAGACT
CCCTGGACTTTTCAGTTCCCTCGTTTATTTTGTGTTTTGCTATTTTATGG
GCTTGGGCACGTTTCGAAAGAGAGATGCAACCAACACAGCCATAATTATT
TCCGCCATGTCGGTGATGCTCTGTGTCGTTAGTACTGTAAAGTGTGTTTT
ACAAAAGTTGTACTTATTTTCAATTTCGTTTTCAGAAACTTCTTCCCGCC
CGTCAGCATGCGGCCTCTCAACACCTTTGTTGCAACTAGCCGAATTTGTC
GACGTATGGAAGAAATCACAAAAGTTTGTCCAACTGAAACAAAAGGTTGA
CTACAAATCGTGCCCAAGGAAAATTCCTCAGAACAGTCGAGAGGTATTTA
CAGACAGTACTAGTATTGGCGTGTTCATGTGAATATTTGAGGTGTTTGAT
TATACGCCCCTGGTGTGCGACCCGCCCTGAAATTTTCTACCCGTAGTGCT
GACACTACGATGAAAAGTATAATGTTTGTTTCAACTCCGTTTCAACTCCT
AGCTCATAACTGTTCGAAAGGTATATCGACAAAAAAACAGGAAAATGTTT
TTTTACATGCGTAGAGAATTTGGGCAAAGTTGCCATCTAATTGCACCCCC
AACAGGTATTTTACACTCCATTTCTGAGATTTTTCTCCCAAAACTTAGAT
CAGAGGAGCGTATCGTCAACAGGAGGACTTCACAGACGTGTTTTCTTCTC
ATTTGGAGGACATAGCACGGATCATAAACCGGGAAATTATGAAAAATGAC
CCCAAAACTTGAAACAGCAACAAAGAAACAGAACCTCCGTGAAAGCCTGC
CGAGAGTCCCGAATTATTACGCGCAGAGGGACAGAGAGCACATGCGCACT
AGGTAGGACGATACAGTAGCCATTGCCAAGATCCACACGCTAGATTTGGC
TTGGCGGGAAGCTGTTCTATGCTGGAGGAGCTAAAGTAATTCATGTGCAG
TTGCAACAACAAATGGGTGCCGTTTTCAACTGTTCATGTTATGTCAGCCT
TGGCCAATCGCGCACGACGAATGCTTTCTCTCCTTCAGGTCTGGGCTTAT
CCAACCCTAATCAAGTACACGATACCCAATGGGTGAAGATCTATCTTAGC
GGGGATAGTGACGGCCATGATCCTGATCGCTGTGGTACGTTCGTTTTGTC
CCACTTTTGCATCCACCGCCTTTGGCCCCTTGGTCAAGTCCGGGACGTGC
AAGAAACGAAATTCCTCTGTGAATGTTCACAGGTTTGGTCGATCACTTTC
AGAAAATTCCGTTAGCTTGTACCTCCCAAAGCAACACAACGCAACGCAAA
TGTTGTTTTTCGTGCTCGATAAGACACGTCAAGTTACTTGTGATTTTTGG
GTTCCAACAGTGTCACAAGCTGGGCTCACCGAAAAACACCGATAATGTTC
CACAGGCCAAATGTTTTGATCCAAAGCGAAAGCTACCAGAAACGTGGACT
GCCTGCAACCGTGTAAGCACTACGGAGTGCGCCGCGGGCTGTGTGGAGCC
ATATGGGCACTTCCAGCGTATCAAAGTACATGACGATACGAAATATGGAC
TGCTGGCTGTTATTTTCCACGTGTTGGTACAAAAGTCACGAATGTCGCAT
ATAAGCCCAATTCATGCCCGATTGTTCCCAAAATTGGTGTGCGTACTACT
GACATGACGATGAGAACCGTGATACAGGGTTGGGCTCCCCACTCGCCAGC
GTTCTAAAGTTATTGCTAGAGCTAAATTGAGGTATAATTTCTACGTTTTG
TATGGGATTAGGACATATCTAATACTTCTCCAAAACGGGCGTTTCTCTGT
TTTTTTGGAGTTTGGACCTGATTTTTTTTTTTTCAATTCTTCTACAACAT
GGGCATATCTCACTTGGCTTTTTGGAGAGTGGACCTGAAATTTTGATGCG
CATCTATCCTCAAAATTTCAGATCTAATGTCCAAAAAACAAGTAGGAAAT
GCCCATGGAATATTTTTGGTAGTGGGTGAAGCTTGTGAGGAAAAATTGAG
CCAAAGTGTCAAGTGAAGTACATCGCCCCCTGCATTGGGAGAGACGGTAT
CTTTATTGAGATTTCTTTTCATGCTACTATAACTAACAACTTGCGTCAAG
TCGGAACGGTCGCTATAATTTTCGCTTTTTTTTGGTACTCGTGGTCAGCT
GTAAATCCAAAATTGTTCTTACTGCCAAAGTTCCATGGTCAGGACCGATC
CATCGCCAAAATCAAAATTTCGCAATAACTGTACGACGACGCACGCGATT
TAGCATGCATCAAGCATTAAAAAAAGACAGCTTGTACGGGAGTGATCAGA
TTTGAATTTCAAAGCGATATGATTTTGTGATTGAATGTTCAAGTCAGAGA
TCATCTTTCGATCAGAATTCCGAATAATTTGGCCGATATTTGGCGGCCGC
TTATTCCTATTGTTTGTTGAGCATTGCCTCGGAATTGCTTGACCGGTATA
ACAAATTATATAGCTGGCAGCCTCTTTTCCGATCAGCAAGTTTTTTGGGG
GGGGGCATAAATAGTGCATAGTCGGCCAATTGATCGTCCTGATCAGCCTT
GGCCCCAAGAACTTCATTGTGATCGCTGTCCATGAATTTAGCATCTATCG
GGCCTGCGTTTGACTCTTTTGGGTCATTCTTGTGTCATTTGTCACTTGAC
TCGAGTCATTTTGGGGGGGTACGCCTCTCCTTTATTTGGCCTTCTAGGTT
CGACCCATAACCATGCTCCCCGCTTATTTTTTCCCTGCTCGTAAATATCG
GCAAAATACGCAGCTTGTGACGCCCCCCCCGGCAATCCTCTCTTGAAATG
ACATCGCAGACTGCTTGAACTTTTGCTTCTGGCCCACCCCGGGGCTCGAG
TACGAGCACCTAGCCTTCGGCCTTAAGGCTGCGGTGCAGCGCGACCCCTT
GGCACTCTCCGCCGACCGTCTGGCATCCGCCAACGAGGACACCATTCGCG
ACTGGTTCTCAGGTTTCGAGATCCCGCAGATCGCCGAACGCGCCTCGAAG
CTCCGAGAATTGGGCTGTGTCTTGCAGGCGCACTTCGGGGGCGAGGCCGC
TCTTCTCGTCGCTCGCGCGGCCCGCTCCGCGGCGCGGTTGGTCCGACTGC
TGACCTGCCTCCTGCCTGGATTCCGTGACGAAGCGTTGCACCACGGTAGG
CAGTGCTTTTTCTACAAGCGGGCTCAGATACTGGCGGCGGACTTGTGGGC
GGCGTACGGCCGGCCGCTCCCCGGGTCGGGCAGCCCGTACGCCTTCGAGG
ACGTGGGAGATCTGACGATGTTTGCTGATTACCGTGTGCCCCAGATCTTG
GCGCACCTCGGGATCATGGAGTACGACCACATTCTGGCGGCTAAGATAGG
GGGCGGGGTAGAGCTGCCGGCGGGCAGTGAGGAGGAGGTGAGGCGGGTTG
TAGACAAGGGCAGGGCAGGGCAGGGCCCGGGGCTGTTTTGAAGATGTCAA
CCGGAGGTTTTTGTCCTGTGCATGGTGGGGCGGTGTATTACGAGAACAAA
AAATAATTGGCGACTAGAGCATCGTGTGTACTGTGTATATGGATCATGAC
ATTTTGCTGCGGTTTTTTTAGGCTTACTCCTTTTTTGCATGTTGTTGTGA
CTGTGCGGACCGGCACGATGGGTACCCCAAAGCATTGCACCCCACGTTTT
TTCGGCGACGGCTGCAGTGCTCTTCAGTTGTCTTTTTGTTTCCGAGAAGC
TTCCATTATTAGGAACGTAGCACACCCCTTCCTGACACGGAGAACAACTG
TTGGTCGTTGGAGAAAGATACGGGCTGTTGCTTCAGTGTAGACTGTTGAT
TCTTGAGGAACTAAGCGTCGAGTTCGACTTCGTTTTCTTTTTCTATTACC
GGGGCTACGCTGTAGTAAAACCGTTACAGGAAATGACTGAGGTAGACTGC
GACGGTGTGATCGGGCAGATGGACAGATTACACTACCTGCGAAATTTCAT
GAGATGGGAGTGCCAATTGGACATCCTGAAGTGATCTTGCCTCCAGCATG
GGGCATGATGAAAGGCTGCCCAGCGACAAAGAGGAAATGAGCAACAAGTC
GCCCTCCGAGTGCATTGCGTAAGAGCTGACACTTGCCTTTCGTTTTGTTG
CCATTTGTGGGGAATATTAGCCGATAATCCGTGAATCTTCGGGGGGGTTT
TCGGAGATCCTCCACCCATGCACTCCCTTTCCCAGAAAACATCAAAGTTT
GAAGTCGCTCCCGTGCTTTGACCTCTTAACCCGAAAGCTCTTTCAACCGA
AACGCACGCCCCCTGCCTTTGTTGTAAGTCATGCACCACTAACTGTGTTC
TCGCTATTTACGATTCGCTTGTATGCGTTTTTCTGGGTTGGGGGGCGGGG
GGCGGGTGGCAACAACAACAGGTTGAAATTAGGGCCGCGTGCGTGCAAGC
AGTGGAGGGATTGAGGATCGAACTTGCGCGTCGCGGAGTGTCGGTGACGA
GCGTAGAGATAGACTGGCGGCTATGGCACGAGGGTGAACGCATCAAAAAG
GACATCGCGCCACATCACCGAACGCTGACCTGCTTTTATTGATCACCCGC
GAAAGTAAGTTTTCGCCTCGCGAAGGAAGTCAGTGTCCATGGTGCGCGCG
GGGAGGTATGGGGGCGGGGGGCGGGCGTCCTCACGGTTGCATATACCGCC
TTCAGTTTTTACCGTGTTCTTGAGGCTGCCGCTGGGGTTGTGGAGCACGC
GGGTGCTTTGTCGCAAGGGTTAGATGACGTCGTGGTATGCGGATGATCGT
GCATATTGCTTTCCTTTTGTTCCAAGCTGTCTTGCCACTTGACATGTGTT
TATATATGCGAGTGGTTGTGGGTAGTGAGGTGGTGATTTTCTGTGTGGCG
GTTTCCCCTGTGGTGACTAAGCACCGTGCATTGAAGTAGTCGTTGTTGCC
GTGAACGGAAGGCACCCGCAATGCTGGCCAATGAAACGCTTGAAGTTGCG
TTACGGTCAAGATTGCTCTTCACACGGTGGTGTGTGGTGATAAAAGAAAC
AGGACTTGTTCGTTTGTTTCGGTTTGAGATGATGGTCAGCGGAGGGTAGA
GCTGTGAGGAGTGATTCCATTGTGTGCGGTAGAACAGGGGCCGGCGGGTG
GTGGCGTCATTTGAATTTTCCACGTGTACTTTTGTGTTACCCTCAGCTCA
GGTAGCTTGTGTCTCAGCGCTGCTTGTATTTATCAGAAACCAGTGAACGT
CAAAAGAGTGGCATGTGTTGCTCCTTCCTGCAATATAGAAGCCGTTCAAT
TCATTCGATGCGTCGTGTGCGGTTATGATGCATTAGGGAGGGGTTATCAG
CGTATATCTTGCTCGCATGGATATTTTTGTAAAATATCCGCTGGGAGCGC
TAGGAGGGGGATAGGGGGCG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig1835:9271..20140+

>mRNA_H-paniculata_contig1835.4493.1 ID=mRNA_H-paniculata_contig1835.4493.1|Name=mRNA_H-paniculata_contig1835.4493.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1992bp|location=Sequence derived from alignment at H-paniculata_contig1835:9271..20140+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACTGGGTTCCGCTGCCGGCGCCGATCAACCCCCTCGCAGCAGTGCG
GCGGACGACAGCTGAGGTAATGCACCGGGCGATGCATGTGTCTCTCAACA
GTGAGGCAGTGGAGCAACTCGCTAAAGTGTGGGCAACGGAGGGTGGAAGC
GGAGGCGCAGATGGACTGGGTTCCGCTGCCGGCGCCGATCAACCCCCTCG
CAGCAGTGCGGCGGACGACAGCTGAGGTAATGCACCGGGCGATGCATGTG
TCTCTCAACAGTGAGGCAGTGGAGCAACTCGCTAAAGTGTGGGCAACGGA
GGGTGGAAGCGGAGGCGCAGGTGTCGGGTGGAATGAGTCCGGCTGGCACT
ATTCGGAAGACGCTGCTGCTGGCGGGACGTTGACATGCCAATATGTTTTT
GTACTCGGTGTCGGGTGGAATGAGTCCGGCTGGCACTATTCGGAAGACGC
TGCTGCTGGCGGGACGTTGACATGCCAATATGTTTTTGTACTCGACTGCT
TGAACTTTTGCTTCTGGCCCACCCCGGGGCTCGAGTACGAGCACCTAGCC
TTCGGCCTTAAGGCTGCGGTGCAGCGCGACCCCTTGGCACTCTCCGCCGA
CCGTCTGGCATCCGCCAACGAGGACACCATTCGCGACTGGTTCTCAGGTT
TCGAGATCCCGCAGATCGCCGAACGCGCCTCGAAGCTCCGAGAATTGGGC
TGTGTCTTGCAGGCGCACTTCGGGGGCGAGGCCGCTCTTCTCGTCGCTCG
CGCGGCCCGCTCCGCGGCGCGGTTGGTCCGACTGCTGACCTGCCTCCTGC
CTGGATTCCGTGACGAAGCGTTGCACCACGGTAGGCAGTGCTTTTTCTAC
AAGCGGGCTCAGATACTGGCGGCGGACTTGTGGGCGGCGTACGGCCGGCC
GCTCCCCGGGTCGGGCAGCCCGTACGCCTTCGAGGACGTGGGAGATCTGA
CGATGTTTGCTGATTACCGTGTGCCCCAGATCTTGGCGCACCTCGGGATC
ATGGAGTACGACCACATTCTGGCGGCTAAGATAGGGGGCGGGGTAGAGCT
GCCGGCGGGCAGTGAGGAGGAGACTGCTTGAACTTTTGCTTCTGGCCCAC
CCCGGGGCTCGAGTACGAGCACCTAGCCTTCGGCCTTAAGGCTGCGGTGC
AGCGCGACCCCTTGGCACTCTCCGCCGACCGTCTGGCATCCGCCAACGAG
GACACCATTCGCGACTGGTTCTCAGGTTTCGAGATCCCGCAGATCGCCGA
ACGCGCCTCGAAGCTCCGAGAATTGGGCTGTGTCTTGCAGGCGCACTTCG
GGGGCGAGGCCGCTCTTCTCGTCGCTCGCGCGGCCCGCTCCGCGGCGCGG
TTGGTCCGACTGCTGACCTGCCTCCTGCCTGGATTCCGTGACGAAGCGTT
GCACCACGGTAGGCAGTGCTTTTTCTACAAGCGGGCTCAGATACTGGCGG
CGGACTTGTGGGCGGCGTACGGCCGGCCGCTCCCCGGGTCGGGCAGCCCG
TACGCCTTCGAGGACGTGGGAGATCTGACGATGTTTGCTGATTACCGTGT
GCCCCAGATCTTGGCGCACCTCGGGATCATGGAGTACGACCACATTCTGG
CGGCTAAGATAGGGGGCGGGGTAGAGCTGCCGGCGGGCAGTGAGGAGGAG
GTTGAAATTAGGGCCGCGTGCGTGCAAGCAGTGGAGGGATTGAGGATCGA
ACTTGCGCGTCGCGGAGTGTCGGTGACGAGCGTAGAGATAGACTGGCGGC
TATGGCACGAGGGTGAACGCATCAAAAAGGACATCGCGCCACATCACCGA
ACGCTGACCTGCTTTTATTGAGTTGAAATTAGGGCCGCGTGCGTGCAAGC
AGTGGAGGGATTGAGGATCGAACTTGCGCGTCGCGGAGTGTCGGTGACGA
GCGTAGAGATAGACTGGCGGCTATGGCACGAGGGTGAACGCATCAAAAAG
GACATCGCGCCACATCACCGAACGCTGACCTGCTTTTATTGA
back to top