prot_H-paniculata_contig1834.4490.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1834.4490.1
Unique Nameprot_H-paniculata_contig1834.4490.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length182
Homology
BLAST of mRNA_H-paniculata_contig1834.4490.1 vs. uniprot
Match: D8LPR5_ECTSI (Pex2_Pex12 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPR5_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 1.160e-55
Identity = 122/182 (67.03%), Postives = 135/182 (74.18%), Query Frame = 0
Query:    1 MVVRRTTYEDYQEDVQAXXXXXXXXXXXXXXXXXXXXXATAA----------GMGDGKGFSGKVGKYGRLLLVAAVVGFKIVEWWTRVEAQEGSSWRRSRLPQSLPPPQPPTPAAGGCGVPADCGVCPSCGGARVNPTLCAASGFVFCYRCLSRHVREHGECPVTGLACGAAGVVRLYDDDE 172
            MVVRR T ED+QED +AXXXXXXXXXXXXXXXXXXXXX               +GD      +V +YGR+LL+ AVV FKIVEWW RVE+QEGSSWRRS+LP        P  A GGCGVP+D G CP+CGGARVNP LCAASGFVFCY CLS HVREHGECPVTGLAC   G+VRL+DDDE
Sbjct:  311 MVVRRATIEDWQEDAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLGD------RVARYGRVLLITAVVAFKIVEWWNRVESQEGSSWRRSQLPSPXXXXXXPLAAPGGCGVPSDSGACPACGGARVNPALCAASGFVFCYGCLSAHVREHGECPVTGLACQEEGIVRLFDDDE 486          
BLAST of mRNA_H-paniculata_contig1834.4490.1 vs. uniprot
Match: A0A7S2SVU8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVU8_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.770e-18
Identity = 47/113 (41.59%), Postives = 66/113 (58.41%), Query Frame = 0
Query:   59 RLLLVAAVVGFKIVEWWTRVEAQEGSSWRRSRLPQSLP-PPQPPTPAAGGCGVPADCGVCPSCGGARVNPTLCAASGFVFCYRCLSRHVREHGECPVTGLACGAAGVVRLYDD 170
            R+ LVAAV GFKI++WW     Q GS+   S +    P PP+ P PA  G  +P D  +CP C   + NP   +  G+ FC+ CLS +V++HG CP+T L C  + + R+Y D
Sbjct:    7 RVSLVAAVTGFKILQWWR----QAGSTALPSSVSHIQPAPPKAPKPARDGVPLPLDDDLCPLCHRRKTNPAA-SCDGYTFCFPCLSTYVQKHGRCPITLLPCAESSIRRIYLD 114          
BLAST of mRNA_H-paniculata_contig1834.4490.1 vs. uniprot
Match: A0A7S0CGI9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CGI9_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.040e-13
Identity = 35/81 (43.21%), Postives = 52/81 (64.20%), Query Frame = 0
Query:   94 SLPPPQPPTPAAGG-----CGVPADCGVCPSCGGARVNPTLCAASGFVFCYRCLSRHVREHGECPVTGLACGAAGVVRLYD 169
            S+PPPQPP             +P+D  +CP C  + VNP + A SG+VFCYRC+  HVR+HG CP++G++C  + ++ LY+
Sbjct:   29 SIPPPQPPKVGMNMNDLALVQLPSDKSLCPLCKQSIVNP-VAATSGYVFCYRCIVMHVRQHGTCPISGMSCSESRIIPLYE 108          
BLAST of mRNA_H-paniculata_contig1834.4490.1 vs. uniprot
Match: A0A0G4J477_PLABS (Peroxisome assembly protein 12 n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J477_PLABS)

HSP 1 Score: 70.9 bits (172), Expect = 3.210e-11
Identity = 42/115 (36.52%), Postives = 58/115 (50.43%), Query Frame = 0
Query:   56 KYGRLLLVAAVVGFKIVEWWTRVEAQEGSSWRRSRLPQSLPPPQPPTPAAGGCGVPADCGVCPSCGGARVNPTLCAASGFVFCYRCLSRHVREHGECPVTGLACGAAGVVRLYDD 170
            KY + +L+ ++  FKI+EWW    A E +      LP            A    +P     CP C   R NP  C  SGFVFC+ C+ RHVR+HG CPV+ + C    + +LY+D
Sbjct:  230 KYFKWMLLGSIFVFKILEWWY---ASESTLNPVKSLPVXXXXXXXXXXXAALHTLPPMVQTCPICRQPRANPA-CTPSGFVFCWLCIFRHVRQHGTCPVSNMPCTEQQIRKLYED 340          
BLAST of mRNA_H-paniculata_contig1834.4490.1 vs. uniprot
Match: A0A7L2V611_9AVES (Peroxisome assembly protein 12 (Fragment) n=1 Tax=Brachypteracias leptosomus TaxID=135165 RepID=A0A7L2V611_9AVES)

HSP 1 Score: 70.5 bits (171), Expect = 4.750e-11
Identity = 42/102 (41.18%), Postives = 53/102 (51.96%), Query Frame = 0
Query:   70 KIVEWWTRVEAQEGSSWRRSRLPQSLPPPQPPT---PAAGGCGVPADCGVCPSCGGARVNPTLCAASGFVFCYRCLSRHVREHGECPVTGLACGAAGVVRLY 168
            + ++WW   E QE     R+     LP P PP    P A    +P    +CP C   RVN T+ A SGFVFCYRC+  HV+ H  CPVTG       +V+LY
Sbjct:  256 QFLDWWYSSENQETIKSLRA-----LPTPPPPVHLDPRAASATLPRLRTLCPLCCRVRVNATVLATSGFVFCYRCIHAHVKSHQCCPVTGYPTQLQHLVKLY 352          
BLAST of mRNA_H-paniculata_contig1834.4490.1 vs. uniprot
Match: C1E1I7_MICCC (Peroxisomal protein importer family n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E1I7_MICCC)

HSP 1 Score: 70.1 bits (170), Expect = 7.560e-11
Identity = 44/109 (40.37%), Postives = 56/109 (51.38%), Query Frame = 0
Query:   62 LVAAVVGFKIVEWWTRVEAQEGSSWRRSRLPQSLPPPQPPTPAAGGCGVPADCGVCPSCGGARVNPTLCAASGFVFCYRCLSRHVREHGECPVTGLACGAAGVVRLYDD 170
            L+AAVVGFK++EWW    A++     RS  P        P P A  C VP D  +CP C      P +   SG+VFC+ C+   VR  G CPVT  A     VVRL+ +
Sbjct:  301 LMAAVVGFKLLEWWYG-SAEDAVFRDRSHPPXXXXXRTAPHPRAR-CVVPRDPALCPLCRRRCSQPAVVRTSGWVFCHPCVVDEVRRFGRCPVTLAAAAEGDVVRLFSE 407          
BLAST of mRNA_H-paniculata_contig1834.4490.1 vs. uniprot
Match: A0A7J8GEK1_ROUAE (Peroxisomal biogenesis factor 12 n=1 Tax=Rousettus aegyptiacus TaxID=9407 RepID=A0A7J8GEK1_ROUAE)

HSP 1 Score: 64.3 bits (155), Expect = 5.910e-10
Identity = 39/114 (34.21%), Postives = 54/114 (47.37%), Query Frame = 0
Query:   62 LVAAVVGFKIVEWWTRVEAQEGSSWRRSRLPQSLPPPQPPTPAAGGCG---VPADCGVCPSCGGARVNPTLCAASGFVFCYRCLSRHVREHGECPVTGLACGAAGVVRLYDDDE 172
            L   V   + ++WW   E QE       +   +LP P PP           +P    VCP C   RVN T+ A SG+VFCYRC+  +VR H  CP+TG       +++LY  + 
Sbjct:   28 LSVGVFFLQFLDWWYSSENQE-----TIKSLTALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVNDTVLATSGYVFCYRCVFNYVRSHQSCPITGYPTEVQHLIKLYSPEN 136          
BLAST of mRNA_H-paniculata_contig1834.4490.1 vs. uniprot
Match: A0A7S3PVV8_9STRA (Peroxin-12 (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVV8_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.250e-9
Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 0
Query:   91 LPQSLPPPQPPTPAAGGCGVPADCGVCPSCGGARVNPTLCAASGFVFCYRCLSRHVREHGE-CPVTGLACGAAGVVRLYD 169
            +P  L PP      + G  +P +  +CP C   RVNPT  ++SG+VFC++CL  H+REH E CPVTGL C    VVRL++
Sbjct:  338 IPPPLAPPILHIDGSVGSQLPNNKSLCPICFQKRVNPTA-SSSGYVFCFKCLVTHIREHAEECPVTGLRCTENQVVRLFE 416          
BLAST of mRNA_H-paniculata_contig1834.4490.1 vs. uniprot
Match: UPI00189C8FE0 (peroxisome assembly protein 12 isoform X2 n=1 Tax=Choloepus didactylus TaxID=27675 RepID=UPI00189C8FE0)

HSP 1 Score: 65.1 bits (157), Expect = 2.320e-9
Identity = 40/114 (35.09%), Postives = 55/114 (48.25%), Query Frame = 0
Query:   62 LVAAVVGFKIVEWWTRVEAQEGSSWRRSRLPQSLPPPQPPTPA---AGGCGVPADCGVCPSCGGARVNPTLCAASGFVFCYRCLSRHVREHGECPVTGLACGAAGVVRLYDDDE 172
            L   V   + ++WW   E QE       +   +LP P PP      A    +P    VCP C   RVN T+ A SG+VFCYRC+  +VR H  CP+TG       +++LY  + 
Sbjct:  162 LSVGVFFLQFLDWWYSSENQE-----TIKALTALPTPPPPIHLDYNADSPLLPKMKTVCPLCRKTRVNDTVLATSGYVFCYRCVFNYVRSHHTCPITGYPTEVQHLIKLYSPEN 270          
BLAST of mRNA_H-paniculata_contig1834.4490.1 vs. uniprot
Match: A0A4C1U3H8_EUMVA (Peroxisome assembly protein 12 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1U3H8_EUMVA)

HSP 1 Score: 65.5 bits (158), Expect = 2.560e-9
Identity = 40/99 (40.40%), Postives = 50/99 (50.51%), Query Frame = 0
Query:   70 KIVEWWTRVEAQEGSSWRRSRLPQSLPPPQPPTPAAGGCGVPADCGVCPSCGGARVNPTLCAASGFVFCYRCLSRHVREHGECPVTGLACGAAGVVRLY 168
            + + WW      EG   R    P +LP P  PTP      +     VCP C      PT+   SG+VFCY C+ RH+REH  CPVT L   +A +VRLY
Sbjct:  249 QFLRWW------EG---RADAAPATLPVPPVPTPRPE---LKRAANVCPLCLRPWRTPTVLPVSGYVFCYGCIERHLREHSACPVTRLPARSATLVRLY 335          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1834.4490.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPR5_ECTSI1.160e-5567.03Pex2_Pex12 domain-containing protein n=2 Tax=Ectoc... [more]
A0A7S2SVU8_9STRA1.770e-1841.59Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0CGI9_9STRA2.040e-1343.21Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A0G4J477_PLABS3.210e-1136.52Peroxisome assembly protein 12 n=1 Tax=Plasmodioph... [more]
A0A7L2V611_9AVES4.750e-1141.18Peroxisome assembly protein 12 (Fragment) n=1 Tax=... [more]
C1E1I7_MICCC7.560e-1140.37Peroxisomal protein importer family n=1 Tax=Microm... [more]
A0A7J8GEK1_ROUAE5.910e-1034.21Peroxisomal biogenesis factor 12 n=1 Tax=Rousettus... [more]
A0A7S3PVV8_9STRA1.250e-946.25Peroxin-12 (Fragment) n=1 Tax=Chaetoceros debilis ... [more]
UPI00189C8FE02.320e-935.09peroxisome assembly protein 12 isoform X2 n=1 Tax=... [more]
A0A4C1U3H8_EUMVA2.560e-940.40Peroxisome assembly protein 12 n=1 Tax=Eumeta vari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 108..166
e-value: 3.7E-5
score: 25.4
IPR017375Peroxisome assembly protein 12PANTHERPTHR12888PEROXISOME ASSEMBLY PROTEIN 12 PEROXIN-12coord: 3..169
NoneNo IPR availablePANTHERPTHR12888:SF0PEROXISOME ASSEMBLY PROTEIN 12coord: 3..169
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 115..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1834contigH-paniculata_contig1834:20327..22050 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1834.4490.1mRNA_H-paniculata_contig1834.4490.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1834 19680..22162 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1834.4490.1 ID=prot_H-paniculata_contig1834.4490.1|Name=mRNA_H-paniculata_contig1834.4490.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=182bp
MVVRRTTYEDYQEDVQAAAAAAAAATSASSAGGAEETTATAAGMGDGKGF
SGKVGKYGRLLLVAAVVGFKIVEWWTRVEAQEGSSWRRSRLPQSLPPPQP
PTPAAGGCGVPADCGVCPSCGGARVNPTLCAASGFVFCYRCLSRHVREHG
ECPVTGLACGAAGVVRLYDDDEGASGGGGGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR017375PEX12