prot_H-paniculata_contig18302.4482.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18302.4482.1
Unique Nameprot_H-paniculata_contig18302.4482.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length89
Homology
BLAST of mRNA_H-paniculata_contig18302.4482.1 vs. uniprot
Match: A0A392R6B7_9FABA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392R6B7_9FABA)

HSP 1 Score: 84.0 bits (206), Expect = 3.820e-19
Identity = 41/89 (46.07%), Postives = 64/89 (71.91%), Query Frame = 0
Query:    1 KAICTKYIFKRKLKEDGSVARYKARLVAQGFSQVGGGDFFETSAPVARTSTLRTVYSLAAEHDFELEDIDVDAAYLNAPQKQSCLLSYP 89
            K I +++++K K K DGS+ RYKARLVA+G++QV G DFFET +PVA+ +T+RT+ +LAA H + L  +DV+  +L+   ++   +S P
Sbjct:   18 KPIGSRWVYKVKHKADGSIERYKARLVAKGYTQVEGIDFFETFSPVAKITTVRTLLALAAIHSWHLHQLDVNNVFLHGDLQEEVYMSIP 106          
BLAST of mRNA_H-paniculata_contig18302.4482.1 vs. uniprot
Match: UPI001CA468C4 (hypothetical protein n=1 Tax=Xylella fastidiosa TaxID=2371 RepID=UPI001CA468C4)

HSP 1 Score: 82.8 bits (203), Expect = 2.150e-18
Identity = 40/89 (44.94%), Postives = 61/89 (68.54%), Query Frame = 0
Query:    1 KAICTKYIFKRKLKEDGSVARYKARLVAQGFSQVGGGDFFETSAPVARTSTLRTVYSLAAEHDFELEDIDVDAAYLNAPQKQSCLLSYP 89
            KAI  K+IFK+K+K DG++ ++KARLVA+GF+Q  G D+F+T APVAR ST+R + ++A+ H   +  +DV  A+LN    +   +  P
Sbjct:   16 KAIGCKWIFKKKMKVDGTIDKFKARLVAKGFTQKEGIDYFDTYAPVARISTIRVLLAIASIHKLHIHQMDVKTAFLNGELDEEIYMKQP 104          
BLAST of mRNA_H-paniculata_contig18302.4482.1 vs. uniprot
Match: A0A4Y1R7U6_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R7U6_PRUDU)

HSP 1 Score: 84.7 bits (208), Expect = 2.880e-18
Identity = 40/89 (44.94%), Postives = 63/89 (70.79%), Query Frame = 0
Query:    1 KAICTKYIFKRKLKEDGSVARYKARLVAQGFSQVGGGDFFETSAPVARTSTLRTVYSLAAEHDFELEDIDVDAAYLNAPQKQSCLLSYP 89
            KAI  K++F++KLK DGS+ +YKARLVA+GF+Q  G D+F+T +PV+R +T+RT+ +LA+ H+  +  +DV  A+LN    +   +  P
Sbjct:   35 KAIGCKWVFRKKLKPDGSIDKYKARLVAKGFTQKKGIDYFDTYSPVSRITTIRTLIALASVHNLVIHQMDVKTAFLNGDLDEEIYMEQP 123          
BLAST of mRNA_H-paniculata_contig18302.4482.1 vs. uniprot
Match: A0A177TFL0_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TFL0_9BASI)

HSP 1 Score: 87.4 bits (215), Expect = 3.700e-18
Identity = 44/89 (49.44%), Postives = 61/89 (68.54%), Query Frame = 0
Query:    1 KAICTKYIFKRKLKEDGSVARYKARLVAQGFSQVGGGDFFETSAPVARTSTLRTVYSLAAEHDFELEDIDVDAAYLNAPQKQSCLLSYP 89
            KAI +++++K KL EDG   R+KARLVAQGF+QV G D+FET APVAR  +LR + +LAA  D+ +  +DV  AYLN   ++   +  P
Sbjct:  790 KAIGSRWVYKLKLDEDGVAHRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFDWVIHQVDVVTAYLNGDLEEEVYIRQP 878          
BLAST of mRNA_H-paniculata_contig18302.4482.1 vs. uniprot
Match: A0A6L2NKU3_TANCI (Zinc finger, CCHC-type (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2NKU3_TANCI)

HSP 1 Score: 87.0 bits (214), Expect = 4.820e-18
Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 0
Query:    6 KYIFKRKLKEDGSVARYKARLVAQGFSQVGGGDFFETSAPVARTSTLRTVYSLAAEHDFELEDIDVDAAYLNAPQKQSCLLSYP 89
            K+I KRK+K DGS+ +YKARLV QGF Q  G DFF+T APVAR ST+R + +LAA HD  +  +DV  A+LNA   +   +  P
Sbjct:  285 KWILKRKMKVDGSIDKYKARLVIQGFRQKNGIDFFDTYAPVARISTIRLLLALAAIHDLVIHQMDVKTAFLNADLDEEIYMKQP 368          
BLAST of mRNA_H-paniculata_contig18302.4482.1 vs. uniprot
Match: A0A6L2LJ48_TANCI (Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2LJ48_TANCI)

HSP 1 Score: 86.7 bits (213), Expect = 6.320e-18
Identity = 45/89 (50.56%), Postives = 59/89 (66.29%), Query Frame = 0
Query:    1 KAICTKYIFKRKLKEDGSVARYKARLVAQGFSQVGGGDFFETSAPVARTSTLRTVYSLAAEHDFELEDIDVDAAYLNAPQKQSCLLSYP 89
            KA+  K+I KRK+K DGS+ +YKARLV QGF Q  G DFF+T APVAR ST+R + +LAA HD  +  +DV  A+LN    +   +  P
Sbjct:   16 KALRCKWIIKRKMKVDGSIDKYKARLVIQGFRQNEGIDFFDTYAPVARISTIRLLLALAAIHDLVIHQMDVKTAFLNGDLDEEIYMKQP 104          
BLAST of mRNA_H-paniculata_contig18302.4482.1 vs. uniprot
Match: A0A5E8C1W8_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C1W8_9ASCO)

HSP 1 Score: 84.7 bits (208), Expect = 8.620e-18
Identity = 44/89 (49.44%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    1 KAICTKYIFKRKLKEDGSVARYKARLVAQGFSQVGGGDFFETSAPVARTSTLRTVYSLAAEHDFELEDIDVDAAYLNAPQKQSCLLSYP 89
            KAI +K++FK K K DGS+ RYKARLV  GFSQV G D+ ET APV R  T+R V ++AA+  F++  +DV+ A+LN   K+   +  P
Sbjct:  109 KAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQP 197          
BLAST of mRNA_H-paniculata_contig18302.4482.1 vs. uniprot
Match: A0A427Y2R1_9TREE (Integrase catalytic domain-containing protein n=1 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427Y2R1_9TREE)

HSP 1 Score: 86.3 bits (212), Expect = 9.310e-18
Identity = 42/87 (48.28%), Postives = 61/87 (70.11%), Query Frame = 0
Query:    3 ICTKYIFKRKLKEDGSVARYKARLVAQGFSQVGGGDFFETSAPVARTSTLRTVYSLAAEHDFELEDIDVDAAYLNAPQKQSCLLSYP 89
            I  +++FKRK  E G V R+KAR+VA+G+SQV G DF +T APV RT++LR + +LAA+ D EL   DV+ AYLN   ++   +++P
Sbjct:  413 IGVRWVFKRKRDEKGQVVRWKARIVAKGYSQVPGVDFEQTYAPVGRTTSLRILLTLAAQRDLELRQADVEGAYLNGTLEEEIYMAFP 499          
BLAST of mRNA_H-paniculata_contig18302.4482.1 vs. uniprot
Match: A0A427YXG2_9TREE (Uncharacterized protein n=1 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427YXG2_9TREE)

HSP 1 Score: 86.3 bits (212), Expect = 9.390e-18
Identity = 42/87 (48.28%), Postives = 61/87 (70.11%), Query Frame = 0
Query:    3 ICTKYIFKRKLKEDGSVARYKARLVAQGFSQVGGGDFFETSAPVARTSTLRTVYSLAAEHDFELEDIDVDAAYLNAPQKQSCLLSYP 89
            I  +++FKRK  E G V R+KAR+VA+G+SQV G DF +T APV RT++LR + +LAA+ D EL   DV+ AYLN   ++   +++P
Sbjct:  951 IGVRWVFKRKRDEKGQVVRWKARIVAKGYSQVPGVDFEQTYAPVGRTTSLRILLTLAAQRDLELRQADVEGAYLNGTLEEEIYMAFP 1037          
BLAST of mRNA_H-paniculata_contig18302.4482.1 vs. uniprot
Match: A0A427YVD8_9TREE (Uncharacterized protein n=12 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427YVD8_9TREE)

HSP 1 Score: 86.3 bits (212), Expect = 9.450e-18
Identity = 42/87 (48.28%), Postives = 61/87 (70.11%), Query Frame = 0
Query:    3 ICTKYIFKRKLKEDGSVARYKARLVAQGFSQVGGGDFFETSAPVARTSTLRTVYSLAAEHDFELEDIDVDAAYLNAPQKQSCLLSYP 89
            I  +++FKRK  E G V R+KAR+VA+G+SQV G DF +T APV RT++LR + +LAA+ D EL   DV+ AYLN   ++   +++P
Sbjct:  951 IGVRWVFKRKRDEKGQVVRWKARIVAKGYSQVPGVDFEQTYAPVGRTTSLRILLTLAAQRDLELRQADVEGAYLNGTLEEEIYMAFP 1037          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18302.4482.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A392R6B7_9FABA3.820e-1946.07Retrovirus-related Pol polyprotein from transposon... [more]
UPI001CA468C42.150e-1844.94hypothetical protein n=1 Tax=Xylella fastidiosa Ta... [more]
A0A4Y1R7U6_PRUDU2.880e-1844.94Transposable element protein n=1 Tax=Prunus dulcis... [more]
A0A177TFL0_9BASI3.700e-1849.44Integrase catalytic domain-containing protein n=1 ... [more]
A0A6L2NKU3_TANCI4.820e-1852.38Zinc finger, CCHC-type (Fragment) n=1 Tax=Tanacetu... [more]
A0A6L2LJ48_TANCI6.320e-1850.56Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerarii... [more]
A0A5E8C1W8_9ASCO8.620e-1849.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A427Y2R1_9TREE9.310e-1848.28Integrase catalytic domain-containing protein n=1 ... [more]
A0A427YXG2_9TREE9.390e-1848.28Uncharacterized protein n=1 Tax=Saitozyma podzolic... [more]
A0A427YVD8_9TREE9.450e-1848.28Uncharacterized protein n=12 Tax=Saitozyma podzoli... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..82
e-value: 3.7E-20
score: 72.6
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..77
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 1..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18302contigH-paniculata_contig18302:4852..5118 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18302.4482.1mRNA_H-paniculata_contig18302.4482.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18302 4852..5118 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18302.4482.1 ID=prot_H-paniculata_contig18302.4482.1|Name=mRNA_H-paniculata_contig18302.4482.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp
KAICTKYIFKRKLKEDGSVARYKARLVAQGFSQVGGGDFFETSAPVARTS
TLRTVYSLAAEHDFELEDIDVDAAYLNAPQKQSCLLSYP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like